Cytopathology
🤱Breast
Predominantly Small Cohesive Epithelial Tissue Fragments with Myoepithelial Cells and Bare Bipolar Nuclei (Breast Pattern 1)
— Predominantly large epithelial tissue fragments with ME cells and bipolar nuclei, variable number of cohesive smaller epithelial tissue fragments, and few dispersed epithelial cells
Cytology
— Low cellularity, 3D tissue fragments representing TDLUs / small ducts
— Composed of small epithelial cells with some overlapping of small, regular nuclei
— ME cells present on tissue fragments, gives a bimodal appearance
— Smaller flat epithelial sheets with ME cells also seen
— Background contains BBN in a clear field (ie stripped ME cell nuclei)
— Occasional fat fragments and intact lobules
DDx
— Normal breast
— Undersampled or sclerotic papillomas
— —Distinctive meshwork, stellate, or true papillary tissue fragments
— —Large hyperplastic ductal cells, apocrine sheets, siderophages, histiocytes, and a proteinaceous background
— —If infarcted: scattered, rounded-up tissue fragments of degenerate, atypical ductal, apocrine, or squamous cells in a bloody background with siderophages
— Undersampled or Sclerotic Fibroadenomas
— —Distinctive stromal tissue fragments and plentiful BBN
— —Normally feature large, cohesive, 3D branching tissue fragments ("chicken drumstick" or "staghorn" shapes)
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Proteinaceous Background (Breast Pattern 2)
— Proteinaceous background
Cytology
— Granular, thin to thick background
— Variable number of histiocytes, some multinucleated
— Siderophages, cholesterol crystals, and debris common
— Best seen on pap smears (washed off in air-dried giemsaa)
— Can be thin or thick and obscuring, finely granular, or colloidal
— May contain cholesterol crystals, laminated round bodies (Liesegang rings), and calcific debris
Note
— If a nodule is suspected, cyst contents is considered inadequate.
DDx
— Cysts
— —May see only a proteinaceous background with histiocytes
— —Can show apocrine cells in sheets
— —Will show complete drainage
— Fibrocystic change
— —Proteinaceous background with apocrine sheets and small cohesive tissue fragments of ductal epithelial cells with ME cells
— Galactocele
— —Proteinaceous background that varies from cyst fluid to milk, with fat globules in thin proteinaceous material and scattered histiocytes
— Inflamed cysts
— —Large number of neutrophils
— Lactating breast
— —Milky, proteinaceous background containing microglobules of fat in a thin casein
— Epithelial Hyperplasia with Fibrocystic Change
— Radial Scars
— Papillomas
— Granular Cell Tumors
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Predominantly Large Epithelial Tissue Fragments With Myoepithelial Cells and Bare Bipolar Nuclei, a Variable Number of Cohesive Smaller Epithelial Tissue Fragments, and Few Dispersed Epithelial Cells (Breast Pattern 3)
Cytology
— High cellularity
— Large, cohesive, hyperplastic ductal epithelial fragments
— Nuclear overlapping, haphazard arrangement, and streaming
— Irregular or slit-like secondary lumina
— Plenty of ME cells / BBN in background
— Collagenous spherulosis may be present
DDx
— Epithelial Hyperplasia
— —Large hyperplastic fragments, streaming nuclei, secondary lumina, BBN, no stroma
— Fibrocystic Change with Epithelial Hyperplasia
— —Proteinaceous background, histiocytes, apocrine sheets
— Intraductal Papilloma
— —Meshwork, stellate, or true papillary fragments; apocrine cells, siderophages, histiocytes
— Fibroadenoma
— —Branched "staghorn" epithelial fragments, plentiful BBN, stromal fragments
— Phyllodes Tumor
— —Fibroadenoma-like pattern but with hypercellular stroma and spindle cell atypia
— Gynecomastia
— —Hyperplastic ductal cells, can have marked atypia, scarce BBN
— Low-Grade DCIS
— —Scant/absent ME cells and BBN, cribriform/micropapillary architecture
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Predominantly Large Epithelial Tissue Fragments, a Variable Number of Discohesive Smaller Epithelial Tissue Fragments, and Plentiful Dispersed Epithelial Cells (Breast Pattern 4)
Cytology
— High cellularity
— Large, complex 3D epithelial fragments with crowded, atypical nuclei
— Variable discohesive smaller fragments and plentiful dispersed single cells
— Architecture is key: micropapillary, cribriform, or rigid arrays
— Scant or absent ME cells / BBN
— Mild to moderate nuclear atypia
— Occasional psammomatous calcifications
Note
— Absence of ME cells / BBN is the most important feature
— Diagnosis relies on architecture more than the degree of nuclear atypia
— Cribriform fragments may appear "pockmarked" or "cratered"
— Micropapillary fragments have bulbous tips and lack fibrovascular cores
DDx
— Low- to Intermediate-Grade DCIS
— —Stereotypical lesion for this pattern, defined by its architecture
— Epithelial Hyperplasia
— —Presence of prominent ME cells / BBN
— Intraductal Papilloma
— —Has ME cells / BBN, and distinctive meshwork/stellate fragments
— Fibroadenoma
— —Plentiful BBN / ME cells and stromal fragments
— Low-Grade Invasive Ductal Carcinoma
— —Can be indistinguishable from DCIS; increased single cells may favor invasion
— Atypical Ductal Hyperplasia
— —A specific diagnosis not made on FNAB
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Predominantly Small Discohesive Epithelial Tissue Fragments With Plentiful Dispersed Cells (Breast Pattern 5)
Cytology
— High cellularity
— Dominantly small, discohesive, irregular epithelial fragments
— Plentiful dispersed single malignant cells
— Absence of ME cells and BBN
— Nuclear atypia varies according to grade (low to high)
— Intracytoplasmic lumina may be present
— Infiltrated stromal fragments
DDx
— Invasive Ductal Carcinoma (most common)
— Tubular Carcinoma
— —Angulated, rigid tubules with low-grade nuclei
— Carcinoma with Medullary Features
— —Syncytial sheets with pleomorphic nuclei and prominent lymphocytes
— Invasive Micropapillary Carcinoma
— —"Jigsaw" fragments, often with peripheral mucin
— Lobular Carcinoma
— —Small uniform cells, intracytoplasmic lumina, discohesion "from within"
— Metaplastic and Metastatic Carcinomas
— Benign lesion that is heavily smeared (e.g., Fibroadenoma)
— —ME cells / BBN and characteristic stromal fragments
— High-Grade DCIS
— —Prominent necrosis
— Intraductal Papilloma (Pattern 3)
— —ME cells / BBN and true papillary architecture
Notes
— Beware of smearing artifact causing pseudo-discohesion
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Dispersed Cells (Breast Pattern 6)
Cytology
— Highly dispersed population of single epithelial cells
— Scattered minute, discohesive fragments and short single files with nuclear molding
— Cells are small- to intermediate-sized, often with eccentric (plasmacytoid) cytoplasm
— Intracytoplasmic lumina ("targetoid bodies") and signet ring cells are common
— Nuclei uniform, round/angulated with mild pleomorphism
— Absent / scarce BBN and ME cells
— Infiltrated stromal fragments are diagnostic of invasion
DDx
— Lobular Carcinoma (classic presentation)
— High-Grade Invasive Ductal Carcinoma (shows more nuclear atypia)
— Pleomorphic Lobular Carcinoma
— Apocrine Carcinoma
— Lymphoma
— —Complete dispersal, lymphoglandular bodies
— Metastatic Melanoma / Carcinoma
— Benign Dispersed Cells (e.g., from fibrocystic change or smeared fibroadenoma)
— —Distinguished by presence of other benign elements (BBN, apocrine sheets)
Note
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Prominent Necrosis (Breast Pattern 7)
Cytology
— Background of prominent, granular necrotic debris
— Irregular, discohesive epithelial fragments and dispersed single cells
— High-grade nuclear atypia: pleomorphism, hyperchromasia, coarse chromatin, prominent nucleoli
— Cells may have dense eosinophilic or apocrine-type cytoplasm
— Granular or psammomatous calcifications are common
DDx
— Fat Necrosis
— —Lacks atypical epithelium; shows histiocytes and necrotic fat
— Infarcted Papilloma
— —Can show necrosis but may have other features of a papilloma
Note
— Pattern often correlates with TNBC or HER2+ subtypes
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Mucinous Background (Breast Pattern 8)
Cytology
— Abundant, stringy, fibrillary mucin background
— Discohesive sheets, small fragments, and single cells floating in mucin
— Cells have mild - moderate nuclear atypia
— Absence of ME cells / BBN
— Intracytoplasmic lumina and signet ring cells may be present
— Branching capillaries can be seen within the mucin
DDx
— Mucinous Carcinoma (stereotypical lesion)
— Secretory Carcinoma (rare, prominent vacuoles)
— Myxoid Fibroadenoma
— —Distinguished by presence of BBN and ME cells; background is more granular
— Mucocele-like Lesions / Fibrocystic Change
— —Low cellularity and lacks significant atypia
— Metastatic Mucinous Carcinoma (e.g., Colorectal)
— —Consider with relevant history; may show necrosis
— Ultrasound Gel Artifact
— —Can mimic mucin; appears as dense granular blue material on Giemsa
Special Notes
— Mucinous carcinoma is typically ER/PR positive, HER2 negative
— Secretory carcinoma is ER/PR/HER2 negative and has a characteristic ETV6-NTRK3 fusion
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Normal (Breast)
Cells
─ Ductal epithelial cells arranged in 2Dmonolayer sheets or 3D aggregates
─ Myoepithelial cells seen associated with ductal sheets or as stripped nuclei in background
─ Apocrine metaplastic cells, foam cells (histiocytes), and stromal cells may be present
Cytoplasm
─ Ductal cells: Indistinct cell borders, scant cytoplasm
─ Apocrine cells: Abundant, granular cytoplasm with distinct polygonal borders
─ Myoepithelial cells: Inapparent cytoplasm
─ Foam cells: Abundant, vacuolated cytoplasm
Nuclei
─ Ductal cells: Smooth nuclear membranes, finely granular chromatin; 1.5-2 x RBC size
─ Myoepithelial cells: Ovoid nuclei, smaller and darker than ductal nuclei; seen as bare, bipolar nuclei in the background
─ Apocrine cells: Round, centrally or eccentrically placed nuclei with single visible nucleoli
Background
─ Generally clean; may contain mature adipose tissue
─ Myoepithelial cells present as stripped, bare bipolar nuclei
Absent
─ Significant atypia, cellular dyshesion, or 3D crowding
─ Necrosis or significant inflammation
Note
─ The presence of myoepithelial cells, both within epithelial clusters and as bare bipolar nuclei in the background, is the hallmark of a benign process
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Fibroadenoma
Benign, common fibroepithelial tumor characterized by a combination of branching epithelial clusters, fibromyxoid stroma, and abundant bare bipolar nuclei
Clinical
─ Younger women, 20s and 30s
─ Presents as a firm, freely mobile, well-circumscribed, round nodule
Cytology
Cells
─ Hypercellular smears (typically)
─ Large, cohesive, branching 3D clusters ("staghorn" or "antler-horn" shaped)
Cytoplasm
─ Ductal cells have scant to moderate cytoplasm
Nuclei
─ Abundant stripped, bare, bipolar myoepithelial cell nuclei in the background
─ Ductal cell nuclei generally bland, can show mild atypia
Background
─ Fragments of fibromyxoid stroma characteristic
─ Stroma can be myxoid (fuchsia on Romanowsky, translucent on Papanicolaou) or hyalinized and dense
Absent
─ True papillary structures with fibrovascular cores
─ Significant cellular dyshesion, high-grade nuclear atypia, or necrosis
DDx
─ Phyllodes Tumor: increased number of dispersed spindle stromal cells, not just oval bare nuclei; more stromal cellularity/atypia
─ Well-Differentiated Carcinoma: lacks abundant bare nuclei, more cellular dyshesion and crowding; Tubular carcinoma has rigid, angulated tubules, not staghorn sheets
─ Papillary Neoplasm: True papillary fronds with fibrovascular cores, columnar cells, and often a cystic background with histiocytes/siderophages
Note
─ A common cause of false-positive diagnoses due to hypercellularity and focal atypia
─ Combo of 3 classic features (epithelium, stroma, and bare nuclei) essential for diagnosis
─ On liquid-based preps, branching clusters are smaller, stroma less apparent and translucent, and stripped nuclei are reduced
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Constituents | Features of Fibroadenoma on ThinPrep |
Epithelial cells | Smaller clusters, may branch Nucleoli more prominent Increased single, intact cells |
Myoepithelial cells | Stripped nuclei present but may be decreased in number Present in same plane of focus as ductal cells |
Stroma | Smaller fragments Translucent, not metachromatic |
Overlap with well differentiated carcinoma | Supports Benign |
Marked cellularity with branching clusters Single, intact cells Nuclear enlargement Stromal fragments (myxoid degeneration can mimic mucin) | Abundant myoepithelial cells: overlying epithelial cells and stripped nuclei in background Smooth nuclear membranes |
Fibrocystic Changes
A broad category encompassing a spectrum of non-proliferative (simple cysts, apocrine metaplasia) and proliferative lesions with or without atypia (sclerosing adenosis, epithelial hyperplasia)
Clinical
─ Exceedingly common, especially in premenopausal women
─ Often presents as ill-defined, lumpy, or tender areas in the breast that may fluctuate with the menstrual cycle
Cytology
Cells
─ Cellularity is highly variable depending on the specific components present (eg, paucicellular in cysts, hypercellular in hyperplasia)
─ A mixture of benign cell types is the hallmark: ductal cells in flat sheets, apocrine metaplastic cells, and foam cells (histiocytes)
Cytoplasm
─ Varies by cell type: ductal (scant), apocrine (abundant, granular), foam cells (vacuolated)
Nuclei
─ Ductal cells are bland with smooth nuclear membranes and associated myoepithelial cells
─ Apocrine cells have round nuclei with a single prominent, central nucleolus but maintain a low N/C ratio
Background
─ Often contains proteinaceous fluid ("cyst contents"), foam cells, and sometimes siderophages or multinucleated histiocytes
─ Stripped myoepithelial nuclei are usually present
Absent
─ True fibromyxoid stromal fragments characteristic of a fibroadenoma
─ Unequivocal malignant features
Ancillary studies
─ Not applicable
DDx
─ Well-Differentiated Adenocarcinoma: A key challenge is detecting a focal carcinoma within FCC Look for clusters that lack myoepithelial cells and show subtle atypia (crowding, nuclear irregularities, dyshesion) The single cells of lobular carcinoma can mimic histiocytes but have higher N/C ratios
─ Papillary Neoplasm: A key differential for cystic lesions Distinguished by the presence of tightly cohesive, rounded papillary clusters, numerous hemosiderin-laden macrophages, and large degenerative cytoplasmic vacuoles
─ Fibroadenoma: Can be difficult to distinguish from nodular or proliferative FCC The presence of prominent fibromyxoid stroma favors fibroadenoma; foam cells favor FCC The distinction is not critical as both are benign
Note
─ This is a heterogeneous category; reports should specify the components seen (eg, cyst, apocrine metaplasia, epithelial hyperplasia) to best correlate with clinical and imaging findings
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Simple Cyst (Breast)
A common non-proliferative lesion consisting of a fluid-filled sac lined by epithelium
Clinical
─ Rounded mass that typically disappears completely after fluid aspiration
─ Fluid can range from clear yellow to turbid or bloody
Cytology
Cells
─ Paucicellular
─ Contains foam cells (histiocytes), siderophages, and sometimes scant apocrine or ductal cells
─ Reactive cyst lining cells appear spindled with low N:C, can have atypical-appearing nuclei
Cytoplasm
─ Foam cells have abundant, vacuolated cytoplasm
─ Apocrine cells, if present, have abundant, granular cytoplasm
Nuclei
─ Nuclei of foam cells and benign epithelial cells are bland with smooth membranes
─ Reactive lining cells can show nuclear enlargement and hyperchromasia but retain a low N:C
Background
─ Proteinaceous fluid ("cyst contents"), may contain cholesterol crystals or calcific debris
Absent
─ High cellularity of cohesive epithelial groups
DDx
─ Cystic Carcinoma: Atypical epithelial cells, high N:C, significant nuclear irregularity, dyshesion
─ Papillary Neoplasm: 3D papillary clusters, numerous histiocytes/siderophages (often large, degenerative cytoplasmic vacuoles)
Note
─ A diagnosis of "cyst contents" is made when only proteinaceous fluid and histiocytes are present and the lesion resolves on imaging after aspiration
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Duct Ectasia
Dilated major ducts, typically retroareolar, associated with periductal inflammation and fibrosis
Clinical
─ Perimenopausal, multiparous women
─ Mimics malignancy (palpable mass, nipple inversion, or skin retraction)
Cytology
Cells
─ Low cellularity
─ Chronic inflammatory infiltrate (lymphocytes, plasma cells, multinucleated giant cells) characteristic
Background
─ Amorphous, granular debris from inspissated secretions characteristic, can mimic necrosis
─ Cholesterol crystals often present
Absent
─ True necrosis (karyorrhectic nuclear debris)
─ Significant population of atypical epithelial cells
DDx
─ Necrotic Carcinoma: True necrosis (with karyorrhexis) and high-grade cytology
─ Granulomatous Mastitis: Granulomatous inflammatory component, though there is overlap
Note
─ Key to avoid misdiagnosis of malignancy is recognizing granular background (inspissated secretions) rather than true tumor necrosis
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Sclerosing Adenosis
A benign proliferative lesion involving an increase in the number of acini (adenosis) and stromal fibrosis (sclerosis), which can form a palpable mass
Clinical
─ May present as a mammographic mass, calcifications, or distortion, mimicking carcinoma
Cytology
Cells
─ Markedly cellular
─ Epithelial cells in flat sheets, branching clusters, or small acinar structures
─ Mild cytologic atypia and single intact cells are common
Background
─ Fragments of dense, hyalinized stroma associated with the epithelial groups
─ Generally clean apart from the stripped nuclei
DDx
─ Tubular Carcinoma: Lacks abundant myoepithelial cells and has more rigid, angulated tubules
─ Fibroadenoma: Prominent myxoid stroma; staghorn-like epithelial clusters
Note
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Columnar Cell Lesion
A proliferative lesion of TDLUs lined by columnar cells; exists on spectrum from simple change to hyperplasia with or without atypia (i.e., flat epithelial atypia)
Clinical
─ Often incidental, frequently associated with microcalcifications
Cytology
Cells
─ Moderately to highly cellular with cohesive, flat, two-dimensional sheets
─ May show large, "ballooned" or rounded tissue fragments (represents dilated ductules)
Cytoplasm
─ Moderate amount sometimes with apical snouts or blebs
─ Resembles apocrine cytoplasm but less abundant and less coarsely granular
Nuclei
─ Nuclei round to oval
─ Atypia from minimal to severe
─ Myoepithelial cells are often scant or absent from the sheets
Background
─ Often proteinaceous
─ Microcalcifications are common
─ Bare bipolar nuclei may be sparse
Absent
─ Significant 3D crowding or cellular dyshesion
─ Prominent fibromyxoid stroma of a fibroadenoma
DDx
─ Well-Differentiated Carcinoma (DCIS): More architectural complexity (cribriform, micropapillae) and crowding
─ Apocrine Metaplasia: More abundant, coarsely granular cytoplasm and associated with other features of fibrocystic change
─ Fibroadenoma: Prominent branching clusters, fibromyxoid stroma, bare bipolar nuclei
Note
─ Columnar cell lesion with atypia = "Atypical", prompting surgical biopsy
─ Lack of significant crowding and dyshesion avoids overdiagnosis of malignancy
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Overlap with well differentiated carcinoma | Supports Benign |
Marked cellularity Nuclear atypia, mild to severe Mitotic figures Paucity of myoepithelial cells | Minimal dyshesion Lack of cellular crowding |
Lactational Change
Benign physiologic changes in the breast during pregnancy and lactation, which can form a solid mass (lactational adenoma) or a milk-filled cyst (galactocele)
Clinical
─ Occurs in pregnant or lactating women, or as a result of medications
─ Presents as well-defined, mobile mass or cyst
Cytology
Cells
─ Hypercellular
─ Intact, expanded lobular units
─ Cells are fragile with easily disrupted cytoplasm
Cytoplasm
─ Abundant, delicate cytoplasm that is foamy, wispy, or vacuolated
─ Sharply demarcated clear vacuoles (lipid/milk product)
Nuclei
─ Nuclei enlarged ("activated") with prominent nucleoli and coarse chromatin; round, smooth nuclear membranes
─ Numerous bare, round ductal cell nuclei in background due to cytoplasmic fragility (not to be confused with myoepithelial cells)
Background
─“”Milky" proteinaceous fluid containing lipid droplets, best seen on air-dried smears
─ Galactoceles are paucicellular with a predominance of vacuolated, lipid-laden macrophages
Absent
─ True nuclear pleomorphism
─ Fibromyxoid stromal fragments
DDx
─ Adenocarcinoma: true nuclear pleomorphism, membrane irregularity, lacks intact lobular units
─ Secretory Carcinoma: Rare, More signet-ring cells and a lack of intact lobular units
─ Papillary Neoplasm: Lack milky quality and lipid droplets, have true papillary clusters and large degenerative vacuoles, unlike the foamy/small vacuoles of lactation
Note
─ Infarction can introduce necrosis into the background
─ "Atypical" or "suspicious" diagnosis if any doubt exists, prompting biopsy
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Overlap with well differentiated carcinoma | Supports Benign |
Hypercellular Enlarged nuclei with prominent nucleoli Coarse chromatin Appears dyshesive Necrosis | Intact lobular units Round nuclei with smooth nuclear membranes No nuclear crowding within clusters Cytoplasmic vacuolization Proteinaceous background |
Papillary Neoplasm
A growth characterized by fibrovascular cores lined by epithelium, encompassing a spectrum from benign intraductal papilloma to papillary carcinoma
Clinical
─ May present as a subareolar mass or with a unilateral bloody or serous nipple discharge
Cytology
Cells
─ Moderately to highly cellular
─ 3D papillary clusters, may have fibrovascular cores, columnar cells often present
─ Specific benign patterns include "meshwork" and "stellate papillary" fragments with fibroelastotic cores
Cytoplasm
─ Large, degenerative cytoplasmic vacuoles that displace the nucleus are highly specific
─ Apocrine metaplasia is common
Nuclei
─ Nuclei range from bland to markedly atypical; degenerative changes can mimic malignancy
─ Myoepithelial cells variably present, often decreased or absent
Background
─ Cystic background of foam cells and hemosiderin-laden macrophages (siderophages) is key
─ A proteinaceous or hemorrhagic background is common
– Necrosis may be present due to infarction, even in benign papillomas
Absent
─ Large, staghorn-shaped clusters with fibromyxoid stroma (as in fibroadenoma)
─ Milky background with lipid droplets (as in lactational change)
DDx
─ Fibroadenoma: branching epithelial clusters, lacks cystic background, shows prominent fibromyxoid stroma, abundant bare bipolar nuclei (absent in papillary neoplasms)
─ Fibrocystic Change: Cystic background with histiocytes, but lacks 3D papillary structures and degenerative vacuoles
─ Papillary Carcinoma: Cannot be reliably distinguished based on cytology, requiring excision for histologic diagnosis
Note
─ Combination of papillary architecture, cystic background with macrophages, and degenerative vacuoles is key
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Overlapping Features | Supports Benign |
Marked cellularity Single, intact cells Nuclear atypia Paucity of myoepithelial cells Background: mucin, necrosis | Numerous histiocytes Large cytoplasmic vacuoles Papillary structures with vessels |
Adenocarcinoma (Breast)
A malignant proliferation of epithelial cells, encompassing ductal and lobular types, both in situ and invasive
Clinical
─ The most common cancer in women, typically seen in women in their 40s and older
─ Can present as a palpable mass, mammographic density, or as microcalcifications
Cytology
Cells
─ Cellularity ranges from paucicellular (eg, lobular carcinoma) to markedly hypercellular
─ Cellular dyshesion is a key feature, manifesting as loosely cohesive clusters and single intact malignant cells
Cytoplasm
─ Scant to moderate amount, often dense
─ Intracytoplasmic lumens (sharply delineated vacuoles with a central mucin dot) are a helpful feature when present
Nuclei
─ Exhibit features of malignancy: irregular nuclear contours, enlargement (often >2x RBC size), pleomorphism, and prominent or irregular nucleoli
─ Cellular crowding and 3D aggregates without myoepithelial cells are common
Background
─ Can be clean, necrotic (especially in high-grade tumors), or mucinous
─ Stripped malignant nuclei may be seen
Absent
─ A significant population of myoepithelial cells, either overlying clusters or as bare bipolar nuclei in the background
─ Benign architectural patterns like true fibromyxoid stroma
Ancillary studies
─ IHC (+): Hormone receptors (ER, PR) and HER2 status are assessed, typically on cell block or subsequent tissue biopsy
─ IHC (+): E-cadherin is positive in ductal carcinoma and negative in lobular carcinoma
DDx
─ Fibroadenoma: Distinguished by the presence of abundant bare bipolar nuclei and fibromyxoid stroma, despite potential hypercellularity and focal atypia
─ Proliferative Fibrocystic Change (eg, Sclerosing Adenosis): Distinguished by the presence of myoepithelial cells or a lack of significant cellular dyshesion and crowding
─ Papillary Neoplasm: Distinguished by a cystic background with numerous histiocytes, true papillary fronds, and/or large degenerative cytoplasmic vacuoles
Note
─ A reliable distinction between in situ and invasive carcinoma cannot be made on cytology alone
─ The report should include a comment on nuclear grade (low vs high)
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Post-therapeutic Changes (Breast)
A spectrum of reactive and reparative changes seen after surgery, radiation, or trauma, including fat necrosis and radiation atypia
Clinical
─ Occurs in patients with a history of breast-conserving therapy or trauma
─ Can clinically and radiographically mimic recurrent carcinoma, presenting as a firm, irregular mass with skin retraction or dystrophic calcifications
Cytology
Cells
─ Smears are often paucicellular
─ Fat Necrosis: Shows lipid-laden histiocytes (lipophages), multinucleated giant cells, and reactive fibroblasts, which can show marked pleomorphism
─ Radiation Atypia: Both epithelial and mesenchymal cells can be markedly enlarged with bizarre, pleomorphic, hyperchromatic nuclei
Cytoplasm
─ Lipophages have abundant, foamy cytoplasm with lipid vacuoles
─ Irradiated cells often have abundant, vacuolated cytoplasm, helping to maintain a low N:C ratio
Nuclei
─ Reactive fibroblasts/histiocytes can have large, pleomorphic nuclei and prominent nucleoli, mimicking malignancy
─ Irradiated cells have large, hyperchromatic, irregular nuclei, but the chromatin is often pale, smudgy, or indistinct due to degeneration
Background
─ Fat necrosis shows a "dirty" background with acellular lipid globules and inflammatory cells
─ Scarring and dense fibrosis from surgery/radiation may yield scant material
Absent
─ A hypercellular aspirate with numerous dyshesive malignant cells
─ True tumor necrosis and numerous single intact malignant cells are infrequent with radiation change alone and raise suspicion for recurrence
Ancillary studies
─ Not applicable
DDx
─ Recurrent Adenocarcinoma: This is the most important differential Recurrence is favored by hypercellularity, numerous single malignant cells with high N:C ratios, and true tumor necrosis, features which are generally absent in pure post-therapeutic change
Note
─ These changes are a major diagnostic pitfall for a false-positive diagnosis of malignancy
─ Clinical history of prior therapy is essential for correct interpretation
─ Radiation changes can persist for many years after treatment
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Granular Cell Tumor
A tumor of Schwann cell origin that can clinically and radiographically mimic carcinoma
Clinical
─ Presents as a firm, spiculated mass, sometimes fixed to skin or chest wall
Cytology
Cells
─ Moderate to high cellularity with a pattern of small discohesive tissue fragments and plentiful dispersed cells
─ Cells are polygonal and arranged in sheets and singly, resembling histiocytes or apocrine cells
Cytoplasm
─ Abundant, distinctly granular cytoplasm with ill-defined borders
─ A faint granular quality may be seen in the background
Nuclei
─ Small, round, centrally located regular nuclei with bland chromatin
─ Nucleoli and mitoses are typically absent
Background
─ Generally clean, but may have a faint granular appearance from disrupted cytoplasm
─ Occasional spindle stromal fragments may be present
Absent
─ True necrosis (its presence suggests a malignant variant)
─ Myoepithelial cells and bare bipolar nuclei
Ancillary studies
─ IHC (+): S100
─ IHC (-): Cytokeratin
DDx
─ Apocrine Carcinoma: Apocrine carcinoma shows more significant nuclear atypia, pleomorphism, and prominent nucleoli
─ Fibrocystic Change with Apocrine Metaplasia: Benign apocrine cells occur in flatter sheets and are often seen with other elements of FCC like foam cells and a proteinaceous background
Note
─ The combination of granular cytoplasm with bland, central nuclei is the key to diagnosis
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Epithelial Hyperplasia (Breast)
A benign proliferation of ductal epithelial and myoepithelial cells within breast ducts and lobules
Clinical
─ A common finding, often seen in the context of fibrocystic change
─ May be associated with palpable lumps, mammographic asymmetry, or calcifications
Cytology
Cells
─ Moderate to high cellularity
─ Large, cohesive, 3D tissue fragments with a chaotic, haphazard arrangement of cells
─ Smaller cohesive ductal epithelial tissue fragments are also present, with few dispersed single cells
Cytoplasm
─ Scant, ill-defined cytoplasm corresponding to ductal-type cells
Nuclei
─ Myoepithelial cells are numerous, seen both overlying the epithelial fragments and as bare bipolar nuclei in the background
─ Ductal cell nuclei are small, mildly pleomorphic, and stream around irregular, slit-like secondary lumina
Background
─ Generally clean, apart from numerous bare bipolar nuclei
─ Collagenous spherulosis (small, rounded magenta/pale green globules) may be present within epithelial fragments
Absent
─ True stromal fragments (as seen in fibroadenoma)
─ Rigid architectural patterns (eg, cribriform, micropapillary) or significant dispersal of atypical cells
Ancillary studies
─ Not applicable on cytology
DDx
─ Low-Grade Ductal Carcinoma In Situ: DCIS lacks the prominent myoepithelial component and shows more rigid architecture (true cribriform holes, micropapillae) and greater nuclear atypia
─ Fibroadenoma: Distinguished by the presence of true fibromyxoid stromal fragments and characteristic "staghorn" epithelial clusters
─ Papilloma: Distinguished by the presence of specific meshwork or stellate papillary tissue fragments with fibroelastotic cores, often in a proteinaceous background with histiocytes
Note
─ This is the stereotypical benign proliferative pattern; identifying the bimodal population of cells (ductal and myoepithelial) and streaming nuclei is key
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Radial Scar / Complex Sclerosing Lesion
A benign proliferative lesion with central sclerosis and entrapped, distorted tubules that can mimic invasive carcinoma on imaging
Clinical
─ Usually a non-palpable, mammographically detected stellate lesion
─ Histologically associated with a range of proliferative changes, including epithelial hyperplasia, adenosis, and sometimes atypia or low-grade carcinoma
Cytology
Cells
─ Moderate to high cellularity, resembling florid fibrocystic change with epithelial hyperplasia
─ Plentiful large, 3D hyperplastic ductal epithelial tissue fragments and monolayered sheets of apocrine cells
─ Smaller epithelial fragments, some tubular, are also present with a minor component of dispersed cells
Cytoplasm
─ Ductal and apocrine types are present
Nuclei
─ Abundant myoepithelial cells are present on tissue fragments
─ Bare bipolar nuclei are present in small numbers in the background
─ Mild nuclear atypia can be seen
Background
─ Foamy macrophages and a proteinaceous background are usually present
─ Small, sclerotic stromal tufts may be seen
Absent
─ The angulated, rigid tubules of tubular carcinoma
─ Lack of a significant myoepithelial component
Ancillary studies
─ Not applicable on cytology
DDx
─ Tubular Carcinoma: A major radiologic and cytologic differential Tubular carcinoma is distinguished by its rigid, angulated tubules, lack of myoepithelial cells, and more frequent dispersed atypical cells
─ Invasive Ductal Carcinoma: Carcinoma lacks the prominent myoepithelial component and shows more significant nuclear atypia and dispersal
─ Epithelial Hyperplasia / FCC: Overlap is significant; radial scars tend to be more cellular with more ragged epithelial fragments and occasional sclerotic stromal tufts
Note
─ It is essential to recognize the benign cytologic features of this entity to avoid a false-positive diagnosis, as it is often presented with a malignant diagnosis on imaging
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Phyllodes Tumors
Biphasic fibroepithelial tumors with a prominent, cellular stromal component, forming a spectrum from benign to borderline to malignant
Clinical
─ Uncommon lesions presenting similarly to fibroadenomas but often with a history of more rapid growth
─ Borderline and malignant variants can recur and metastasize (stromal component)
Cytology
Cells
─ Moderate to high cellularity with a biphasic pattern of epithelial and stromal components
─ Epithelial component shows large, hyperplastic ductal cell fragments, similar to fibroadenoma
─ Stromal component is hypercellular, with plump spindle cells arranged in large fragments
Cytoplasm
─ Stromal cells are spindle-shaped with elongated cytoplasm
Nuclei
─ Stromal fragments show increased cellularity and mild to marked nuclear atypia, depending on grade
─ A key feature is an increased number of single, dispersed spindle stromal cells in the background
─ Bare bipolar nuclei are present
Background
─ Characterized by large, hypercellular stromal fragments
Absent
─ In high-grade (malignant) phyllodes, the epithelial component may be scant or absent, leaving a picture resembling a sarcoma
Ancillary studies
─ Not applicable on cytology; diagnosis is based on morphology
DDx
─ Fibroadenoma: The primary differential, and distinction can be impossible for benign/borderline tumors Features favoring phyllodes are prominent stromal hypercellularity, stromal nuclear atypia, and an increased number of single spindle cells
─ Metaplastic Carcinoma (Sarcomatoid): High-grade phyllodes can mimic sarcomatoid carcinoma Metaplastic carcinoma will have a component that is positive for keratin markers, while the stroma of phyllodes is negative
─ Primary Sarcoma: Very rare High-grade phyllodes without an epithelial component is cytologically indistinguishable from a primary sarcoma
Note
─ A definitive distinction from fibroadenoma is often not possible on FNA; if features are suggestive of phyllodes, surgical excision is recommended
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Low- and Intermediate-Grade Intraductal Carcinoma / DCIS
A non-invasive carcinoma characterized by malignant cells proliferating within ducts, with low to intermediate nuclear grade and characteristic architectural patterns
Clinical
─ Often presents as mammographic calcifications or an indeterminate mass
─ Includes several architectural subtypes (eg, cribriform, micropapillary, solid)
Cytology
Cells
─ Moderate to high cellularity
─ Pattern of large, complex 3D epithelial tissue fragments, smaller discohesive fragments, and a variable number of dispersed single cells
─ Architecture is key: look for rigid arrays of cells, true cribriform patterns (punched-out holes), or micropapillary fragments (bulbous tips, narrow necks)
Cytoplasm
─ Scant to moderate, dense cytoplasm
Nuclei
─ Mild to moderate nuclear atypia, enlargement, and pleomorphism
─ Nuclei in cribriform patterns are often rigidly arranged and oriented toward the lumina
─ Apoptotic debris can be seen within fragments
Background
─ Can be clean or proteinaceous
─ Psammomatous or irregular calcifications may be present
Absent
─ A significant population of myoepithelial cells or bare bipolar nuclei
─ Necrosis (which is a feature of high-grade DCIS)
Ancillary studies
─ IHC (+): ER is uniformly positive (in contrast to patchy staining in hyperplasia)
─ IHC (-): High molecular weight keratins (CK5/6, CK14)
DDx
─ Epithelial Hyperplasia: Distinguished by the presence of myoepithelial cells and a haphazard, streaming arrangement of nuclei around irregular, slit-like spaces, rather than the rigid, punched-out holes of cribriform DCIS
─ Intraductal Papilloma: Distinguished by the presence of specific meshwork or stellate papillary fragments with fibroelastotic cores, and a prominent myoepithelial component
─ Invasive Carcinoma: The distinction may not be possible on cytology alone Invasion is suggested by a greater degree of dispersal, higher nuclear grade, and definitive stromal infiltration
Note
─ The diagnosis relies heavily on recognizing abnormal architectural patterns in the absence of a prominent myoepithelial cell population
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Encysted Papillary Carcinoma
A variant of intraductal carcinoma that grows as papillary fronds within a large, dilated cystic space, often surrounded by a thick fibrous capsule
Clinical
─ Tends to occur in older women
─ Presents as a cystic or complex solid and cystic mass on imaging
Cytology
Cells
─ High cellularity
─ Arborizing, true papillary fragments with thin fibrovascular cores covered in crowded, multilayered epithelium
─ A variable number of dispersed single cells, which may be columnar
Cytoplasm
─ Scant to moderate cytoplasm
Nuclei
─ Mild to moderately atypical, enlarged nuclei
Background
─ A cystic background with numerous macrophages and siderophages is common
Absent
─ Myoepithelial cells on the papillary fronds
─ Bare bipolar nuclei in the background
Ancillary studies
─ Not applicable on cytology
DDx
─ Intraductal Papilloma: This is the main differential Papillomas have a prominent myoepithelial layer on the fronds (though may be hard to see) and often show apocrine metaplasia and other benign changes Papillary carcinoma lacks the myoepithelial layer and shows more cytologic atypia and discohesion
─ Invasive Papillary Carcinoma: Very rare It is generally not possible to distinguish invasive from encysted (in situ) papillary carcinoma on cytology alone
Note
─ Even with features of a papillary neoplasm, a Code 5 "Malignant" diagnosis should be avoided unless unequivocal features of high-grade carcinoma or invasion are present
─ A diagnosis of "Suspicious, consistent with papillary neoplasm" is often appropriate, requiring excision
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High-Grade Intraductal Carcinoma / DCIS
A non-invasive carcinoma with high-grade nuclear features, often associated with central "comedo-type" necrosis and casting calcifications
Clinical
─ Frequently presents as linear, branching, "casting" microcalcifications on mammography
─ May present as a palpable mass, which often indicates an associated invasive component
Cytology
Cells
─ Cellularity is variable but can be high
─ Small to large, irregular, crowded, and discohesive epithelial tissue fragments
─ A variable number of single, pleomorphic malignant cells are present
Cytoplasm
─ Often dense and eosinophilic, sometimes with an apocrine appearance
Nuclei
─ Marked nuclear pleomorphism, enlargement, hyperchromasia, coarse chromatin, and large, irregular nucleoli
─ Mitotic figures may be seen
Background
─ Abundant granular, necrotic debris (comedonecrosis) is the hallmark feature
─ Irregular, granular microcalcifications are often seen within the necrotic background
Absent
─ Myoepithelial cells and bare bipolar nuclei
Ancillary studies
─ Not applicable on cytology for diagnosis
DDx
─ High-Grade Invasive Carcinoma: Often cytologically indistinguishable An invasive component is more likely with higher cellularity and features of stromal invasion A Code 4 "Suspicious" or Code 5 "Malignant" diagnosis is made, with a note about features of high-grade DCIS
─ Fat Necrosis: Can also have a necrotic background, but lacks the high-grade malignant epithelial cells Fat necrosis shows lipophages, multinucleated giant cells, and ghost outlines of adipocytes
─ Infarcted Papilloma: Can have necrosis but the epithelial cells, if preserved, show features of a papillary neoplasm rather than high-grade ductal carcinoma
Note
─ The combination of high-grade malignant cells with extensive comedonecrosis is highly suggestive of high-grade DCIS
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Infiltrating Ductal Carcinoma
The most common type of invasive breast cancer, characterized by malignant ductal cells infiltrating the stroma
Clinical
─ Constitutes about 75% of breast carcinomas
─ Presents usually as a palpable mass or a solid or stellate lesion on imaging
Cytology
Cells
─ High cellularity in most cases
─ A pattern of small discohesive epithelial tissue fragments and plentiful dispersed single cells
─ Tubular tissue fragments may be seen in grade 1 and 2 tumors
Cytoplasm
─ Often dense-staining with a variable number of intracytoplasmic lumina
Nuclei
─ Show a range of atypia from low-grade (mild enlargement, regular contours) to high-grade (marked pleomorphism, coarse chromatin, prominent nucleoli)
─ Cellular crowding and overlapping are prominent within clusters
Background
─ Fragments of sclerotic or myxoid stroma infiltrated by carcinoma cells are diagnostic of invasion when present
─ Tufted fragments of fibroblastic or sclerotic stroma may be seen
Absent
─ Benign components such as bare bipolar nuclei and myoepithelial cells
Ancillary studies
─ IHC (+): E-cadherin
─ Molecular: Hormone receptor (ER, PR) and HER2 status are determined on cell block or tissue biopsy to guide therapy
DDx
─ High-Grade DCIS: Can be cytologically indistinguishable DCIS is favored by prominent comedonecrosis and calcifications in the absence of definite stromal invasion
─ Lobular Carcinoma: Classic lobular carcinoma has a more highly dispersed pattern of smaller, more uniform cells, is E-cadherin negative, and frequently has intracytoplasmic lumina
─ Fibroadenoma with Atypia: A common pitfall Distinguished by the definitive presence of bare bipolar nuclei and fibromyxoid stromal fragments
Note
─ "Microbiopsies" of stromal fragments infiltrated by carcinoma cells are a specific sign of invasion
─ Cytologic grading (low vs high) based on nuclear features correlates well with histologic grade
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Invasive Micropapillary Carcinoma
An aggressive variant of invasive carcinoma with a distinctive histologic pattern and a high propensity for lymphatic invasion
Clinical
─ Uncommon as a pure tumor but seen as a component in up to 7% of breast cancers
─ Associated with a high rate of lymph node metastases and a worse prognosis
Cytology
Cells
─ Moderate to high cellularity
─ A pattern of small, discohesive tissue fragments and plentiful dispersed cells
─ Characterized by rounded, angulated, or micropapillary small, crowded tissue fragments with well-defined edges, sometimes in a loose "jigsaw" pattern
Cytoplasm
─ Moderate amount, can be columnar or apocrine-like
Nuclei
─ Moderate to high-grade nuclear atypia with large, hyperchromatic nuclei and large nucleoli
Background
─ Mucin may be seen rimming the tissue fragments or focally in the background
─ Psammomatous calcifications can be present
Absent
─ A myoepithelial layer or fibrovascular cores within the micropapillary clusters
Ancillary studies
─ IHC: Epithelial membrane antigen (EMA) shows a characteristic "inside-out" staining pattern on the outer surface of cell clusters on cell block
DDx
─ Low-Grade Micropapillary DCIS: Invasive micropapillary carcinoma is distinguished by higher nuclear grade and a greater degree of cellular dispersal
─ Intraductal Papillary Carcinoma: Has true fibrovascular cores and generally a lower nuclear grade
Note
─ The combination of a "jigsaw" pattern of small, rounded, or angulated tissue fragments with high-grade nuclei is highly suggestive
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Carcinoma With Medullary Features
A high-grade carcinoma characterized by syncytial sheets of pleomorphic cells with a prominent lymphoplasmacytic infiltrate
Clinical
─ Classically forms a quick-growing, rounded mass that can mimic a fibroadenoma or cyst on imaging
─ Associated with BRCA1 germline mutations and has a better prognosis than typical high-grade ductal carcinomas
Cytology
Cells
─ High cellularity
─ Small, syncytial sheets of cells and a variable number of large, dispersed single malignant cells
─ A prominent infiltrate of lymphocytes is seen, both in the background and within the epithelial clusters
Cytoplasm
─ Moderate amount of pale, granular cytoplasm with a high N:C ratio
Nuclei
─ Large, pleomorphic, vesicular nuclei with coarse chromatin and prominent macronucleoli
─ Mitoses can be numerous Plentiful stripped, bizarre nuclei are common
Background
─ Dominated by lymphocytes, occasional plasma cells, and lymphoid cell cytoplasmic fragments (lymphoglandular bodies)
Absent
─ Gland formation or stromal infiltration
Ancillary studies
─ IHC (-): Typically "triple-negative" (ER, PR, and HER2 negative)
─ IHC (+): Often shows a "basal-like" phenotype (positive for CK5/6 or CK14)
DDx
─ High-Grade Lymphoma: Can also show a dispersed pattern of large atypical cells, but lymphoma lacks true epithelial syncytial sheets and will be positive for lymphoid markers (eg, CD45) and negative for keratins
─ Metastatic Carcinoma in a Lymph Node: Can be indistinguishable, but medullary features in a breast primary should be considered if no other primary is known
─ Metastatic Melanoma: Can also have large pleomorphic cells and prominent nucleoli, but melanoma cells are often less cohesive and will be S100 positive
Note
─ The triad of syncytial growth, high-grade nuclei, and a prominent lymphoplasmacytic infiltrate is characteristic
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Metaplastic Carcinoma
A rare, heterogeneous group of tumors containing a mixture of adenocarcinoma with squamous and/or mesenchymal (sarcomatous) elements
Clinical
─ Can present as a rapidly growing mass, sometimes with cystic change
─ Prognosis is generally worse than for typical ductal carcinoma; most are "triple-negative"
Cytology
Cells
─ Moderate to high cellularity with a pattern of small discohesive tissue fragments and dispersed cells
─ Shows variable patterns depending on the components present:
─ 1) Poorly differentiated carcinoma with marked dispersal and high nuclear grade
─ 2) Squamous cell carcinoma with keratinization
─ 3) Sarcomatous, plump spindle cells seen singly or in fragments
Cytoplasm
─ Can be glandular, dense and keratinizing (squamous), or spindled
Nuclei
─ Typically high-grade, pleomorphic nuclei are seen in all components
Background
─ Necrosis is present in about 50% of cases
─ Chondroid or myxoid stromal fragments may be seen if there is chondrosarcomatous differentiation
Absent
─ Benign components like bare bipolar nuclei or myoepithelial cells
Ancillary studies
─ IHC (+): The carcinomatous component (including spindle cell carcinoma) is positive for pankeratin and/or p63 is positive in the sarcomatous component
DDx
─ Malignant Phyllodes Tumor: The main differential for biphasic lesions Malignant phyllodes lacks a keratin-positive carcinomatous component and typically has a benign epithelial element (though it can be scant)
─ Primary Sarcoma: Very rare If no keratin-positive component is identified, it cannot be distinguished from a primary sarcoma on cytology alone
─ Squamous Metaplasia (Benign): Benign squamous cells lack the high-grade nuclear atypia of squamous cell carcinoma
Note
─ The key to the diagnosis is identifying a biphasic population of malignant epithelial (carcinoma) and mesenchymal (sarcoma) cells
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Invasive Lobular Carcinoma
An invasive carcinoma characterized by a diffuse, single-file infiltrative growth pattern, which often results in low cellularity on aspiration
Clinical
─ Constitutes around 15% of breast carcinomas
─ Often presents as a non-specific palpable thickening or architectural distortion on imaging, rather than a discrete mass
Cytology
Cells
─ Cellularity is often low to moderate
─ A highly dispersed pattern of single cells is classic, with scattered minute, loosely cohesive tissue fragments and short, single-file "Indian files"
Cytoplasm
─ Scant to moderate amount, often eccentric (plasmacytoid)
─ Intracytoplasmic lumina (vacuoles with a central mucin dot, sometimes indenting the nucleus to form "signet ring" cells) are a very common and helpful feature
Nuclei
─ Typically small to intermediate in size, with mild to moderate pleomorphism
─ Nuclei are often round or slightly angulated with relatively bland chromatin and inconspicuous nucleoli
Background
─ Can be clean or contain fragments of sclerotic stroma infiltrated by single malignant cells
─ Smearing artifact with stripped nuclei is common
Absent
─ Large, cohesive epithelial sheets
─ A significant population of myoepithelial cells or bare bipolar nuclei
Ancillary studies
─ IHC (-): E-cadherin is characteristically negative, which helps distinguish it from ductal carcinoma
─ Molecular: Typically positive for hormone receptors (ER, PR) and negative for HER2
DDx
─ Low-Grade Ductal Carcinoma: Can have overlapping features, but ductal carcinoma is E-cadherin positive and typically forms more cohesive clusters
─ Benign Intramammary Lymph Node/Lymphoma: Both can show a dispersed cell pattern Lymphoma cells have lymphoid features (eg, lymphoglandular bodies), and benign nodes show a mixed lymphoid population
─ Undersampled Fibroadenoma: Smearing can create a dispersed pattern, but careful search will reveal bare bipolar nuclei and stromal fragments
Note
─ The diffuse infiltration can lead to false-negative FNAs due to low cellularity
─ Pleomorphic lobular carcinoma is a variant with high-grade nuclear features, mimicking high-grade ductal carcinoma, but is still E-cadherin negative
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Mucinous Carcinoma (Breast)
A carcinoma characterized by clusters of relatively bland tumor cells floating in abundant extracellular mucin
Clinical
─ Constitutes about 2% of breast carcinomas, typically in older women
─ Tends to have a favorable prognosis
─ Presents as a rounded, well-defined mass on imaging, mimicking a fibroadenoma or cyst
Cytology
Cells
─ Moderate cellularity
─ Discohesive sheets, small rounded tissue fragments, single files, and dispersed epithelial cells are seen
Cytoplasm
─ Scant to moderate, sometimes with intracytoplasmic vacuoles or signet-ring cell features
Nuclei
─ Typically show low to moderate nuclear grade, with mild enlargement and atypia
Background
─ Dominated by abundant, thick, fibrillary mucin (magenta on Giemsa, stringy green/orange on Pap)
─ Branching, anastomosing capillaries may be seen within the mucin
Absent
─ Myoepithelial cells and bare bipolar nuclei
─ High-grade nuclear features (in pure mucinous carcinoma)
Ancillary studies
─ Molecular: Typically strongly positive for ER and PR, and negative for HER2
DDx
─ Myxoid Fibroadenoma: Can have a background that mimics mucin, but is distinguished by the presence of benign branching epithelial clusters, myoepithelial cells, and abundant bare bipolar nuclei
─ Mucocele-like Lesion: Represents extravasated mucin from ruptured ducts and is typically paucicellular with only tiny clusters of bland ductal cells and numerous histiocytes
Note
─ The combination of abundant extracellular mucin with at least some architecturally and cytologically atypical epithelial clusters is diagnostic
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Secretory Carcinoma (Breast)
A rare, low-grade carcinoma with a favorable prognosis, characterized by prominent intra- and extracellular secretions
Clinical
─ Occurs mainly in women younger than 30, but also in older women and men
─ Presents as a well-circumscribed, subareolar mass
Cytology
Cells
─ Moderate cellularity with large, relatively cohesive tissue fragments, smaller discohesive groups, and dispersed cells
Cytoplasm
─ Abundant, granular, or pale and bubbly/vacuolated cytoplasm with a moderate to low N:C ratio
─ Large intracytoplasmic vacuoles containing mucin globules are characteristic and may form signet ring cells
Nuclei
─ Mildly pleomorphic, often round nuclei with fine chromatin and single prominent nucleoli
Background
─ A thin mucinous background is present
Absent
─ High-grade nuclear features
Ancillary studies
─ Molecular: Associated with a characteristic ETV6-NTRK3 gene fusion
─ IHC (-): Typically triple-negative (ER, PR, HER2 negative)
─ IHC (+): S100
DDx
─ Lactational Change: Distinguished by the presence of intact lobular units and a milky background with lipid droplets, rather than true mucin
─ Mucinous Carcinoma: Has abundant extracellular mucin but typically lacks the prominent intracytoplasmic vacuoles of secretory carcinoma
Note
─ The bubbly cytoplasm with prominent intracytoplasmic vacuoles and signet ring cells is a key feature
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Adenoid Cystic Carcinoma (Breast)
A rare carcinoma identical to its salivary gland counterpart, characterized by a dual population of cells and extracellular matrix material
Clinical
─ Uncommon, typically occurring in elderly women
─ Good prognosis with a low incidence of axillary metastases
Cytology
Cells
─ Moderate cellularity with a mixed pattern of large and small tissue fragments
─ Composed of small, basaloid-type cells with scant cytoplasm
Cytoplasm
─ Poorly defined, scant cytoplasm
Nuclei
─ Mildly enlarged and pleomorphic nuclei with bland chromatin
Background
─ Characterized by hyaline globules (magenta on Giemsa, pale green on Pap) surrounded by tumor cells
─ Larger cribriform tissue fragments with spaces filled with hyaline material may be seen
─ Stripped, round to oval nuclei in the background can mimic bare bipolar nuclei
Absent
─ High-grade nuclear features
Ancillary studies
─ IHC: Shows a dual population; ductal cells are CK5/6 positive, while basal/myoepithelial cells are p63 and S100 positive
─ IHC (-): Typically triple-negative (ER, PR, HER2 negative)
DDx
─ Collagenous Spherulosis: The main differential Spherulosis is distinguished by being a component within otherwise benign hyperplastic epithelial fragments that are associated with myoepithelial cells and bare bipolar nuclei
─ Pleomorphic Adenoma: Very rare in the breast; distinguished by its classic myxofibrillary stroma
Note
─ The presence of numerous, often large, hyaline globules surrounded by basaloid cells is the key diagnostic feature
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Neuroendocrine Carcinoma (Breast)
A rare primary breast carcinoma showing morphologic features of neuroendocrine differentiation
Clinical
─ Can be well-differentiated (carcinoid-like) or poorly differentiated (small cell carcinoma)
─ A component of ductal, lobular, or papillary carcinoma is frequently present
Cytology
Cells
─ Dispersed cell pattern with some minute tissue fragments
─ Cells are plasmacytoid or spindled with moderate cytoplasm
Cytoplasm
─ Moderate amount, granular
Nuclei
─ "Salt and pepper" chromatin (finely and coarsely granular)
─ Nuclear molding may be seen in tissue fragments
Background
─ Apoptotic debris and smearing of chromatin are common
Absent
─ Glandular or squamous features (in pure forms)
Ancillary studies
─ IHC (+): Synaptophysin, Chromogranin
─ Molecular: Often positive for ER
DDx
─ Invasive Lobular Carcinoma: Can also have a dispersed, plasmacytoid pattern, but typically lacks the classic "salt and pepper" chromatin
─ Malignant Lymphoma: Also a dispersed cell tumor, but lymphoma cells will have lymphoid features and be positive for lymphoid markers and negative for keratin and neuroendocrine markers
─ Metastatic Neuroendocrine Carcinoma: A primary breast neuroendocrine carcinoma is a diagnosis of exclusion after ruling out a primary elsewhere (eg, lung, GI tract)
Note
─ Up to 30% of breast carcinomas can show focal neuroendocrine marker positivity, so the diagnosis requires both characteristic morphology and IHC confirmation
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Non-Hodgkin Lymphoma (Breast)
A malignant proliferation of lymphoid cells, which can occur as a primary breast tumor or as secondary involvement from systemic disease
Clinical
─ Rare as a primary breast malignancy
─ Often mimics carcinoma clinically and on imaging
Cytology
Cells
─ An almost completely dispersed pattern of atypical lymphoid cells
─ The specific cell morphology depends on the lymphoma type (eg, large cells resembling centroblasts in DLBCL, a mixed population in MALT lymphoma)
Cytoplasm
─ Typically scant and basophilic, with a high N:C ratio
Nuclei
─ Atypical lymphoid nuclei with irregular contours, coarse or vesicular chromatin, and sometimes prominent nucleoli
Background
─ Lymphoid cell cytoplasmic fragments (lymphoglandular bodies) are a characteristic feature
Absent
─ True epithelial cohesion (syncytial sheets or glands)
Ancillary studies
─ Ancillary Studies: Flow cytometry on a fresh sample is essential for diagnosis and classification
─ IHC (+): Lymphoid markers (eg, CD45, CD20 for B-cell, CD3 for T-cell)
─ IHC (-): Keratins
DDx
─ Carcinoma with Medullary Features: Can have a prominent lymphoid infiltrate, but is distinguished by the presence of true syncytial sheets of large, pleomorphic epithelial cells that are keratin-positive
─ High-Grade Ductal Carcinoma: Can be highly discohesive but lacks lymphoglandular bodies and will be keratin-positive
─ Benign Intramammary Lymph Node: Shows a heterogeneous lymphoid population of small lymphocytes, tingible body macrophages, and germinal center fragments, rather than a monotonous atypical population
Note
─ Immediate on-site evaluation is crucial to recognize a lymphoid process so that a fresh sample can be collected for flow cytometry
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Angiosarcoma (Breast)
A rare malignant tumor of endothelial origin, which can be a primary breast sarcoma or arise as a complication of radiation therapy
Clinical
─ Primary angiosarcoma tends to occur in younger women
─ Secondary angiosarcoma occurs in older women, a median of 6 years post-radiation
─ Can present as a mass or a bluish skin discoloration
Cytology
Cells
─ Cellularity is variable, from low to high
─ Shows small, loosely cohesive acinar, pseudorosette, or spindle cell tissue fragments and single malignant cells
Cytoplasm
─ Can be spindled or epithelioid with intracytoplasmic vacuoles or hemosiderin
Nuclei
─ High-grade nuclear atypia with hyperchromasia, nuclear indentations, and one to two nucleoli
Background
─ Typically hemorrhagic
Absent
─ An epithelial component or myoepithelial cells
Ancillary studies
─ IHC (+): Endothelial markers (CD31, CD34, ERG)
─ IHC (-): Keratins, S100
DDx
─ High-Grade Phyllodes Tumor / Sarcoma: Can also present as a spindle cell malignancy, but will be negative for endothelial markers
─ Spindle Cell Metaplastic Carcinoma: Distinguished by positivity for keratin markers
─ Granulation Tissue: Can have reactive, atypical endothelial cells but is set in an inflammatory background and lacks sheets of frankly malignant cells
Note
─ Diagnosis on FNA is difficult and should be confirmed with core biopsy
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Metastases to the Breast
Malignant tumors from other primary sites that have spread to the breast
Clinical
─ Uncommon, accounting for less than 5% of malignant breast FNAs
─ Most common sources are contralateral breast, melanoma, lymphoma, and lung carcinoma
─ Often presents as multiple, rounded, well-circumscribed masses on imaging
Cytology
Cells
─ Pattern is based on the primary tumor (eg, dispersed large pleomorphic cells for melanoma, molding and "salt and pepper" chromatin for small cell lung cancer)
─ The key is a morphology that is unusual for a primary breast carcinoma
Cytoplasm
─ Varies with primary tumor (eg, melanin pigment may be seen in melanoma)
Nuclei
─ Varies with primary tumor
Background
─ Varies with primary tumor
Absent
─ Features of a typical primary breast carcinoma or a benign proliferative lesion
─ An in situ component
Ancillary studies
─ IHC: A panel is crucial for diagnosis (eg, S100/SOX10 for melanoma; TTF-1 for lung; CDX2 for colorectal; PAX8 for gynecologic/renal)
DDx
─ High-Grade Primary Breast Carcinoma: Can have unusual features, but the clinical history and a targeted IHC panel can usually resolve the differential
─ Malignant Lymphoma: Differentiated by lymphoid markers
Note
─ A metastasis should always be considered when the cytologic features do not fit a known primary breast entity, especially if there is a history of a non-breast malignancy
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♀️Cervix
Non-Diagnostic, Unsatisfactory
This section discusses adequacy criteria.
The assessment of specimen adequacy is a critical component of the cervical cytology report, ensuring that the sample is suitable for evaluation of epithelial abnormalities
Clinical
─ Unsatisfactory specimens generally require a repeat Pap test in 2-4 months; hrHPV triage is not recommended for unsatisfactory cytology
─ Specimens negative for intraepithelial lesion or malignancy (NILM) but lacking an endocervical/transformation zone (EC/TZ) component have specific follow-up guidelines based on age and HPV status
Cell patterns
─ Satisfactory: Estimated minimum of 8,000-12,000 well-visualized squamous cells (conventional smears) or 5,000 (liquid-based preparations, LBP); presence or absence of EC/TZ component (at least 10 well-preserved endocervical or squamous metaplastic cells) should be reported
Background
─ Unsatisfactory if >75% of epithelial cells obscured by blood, inflammation, debris, air-drying, or other artifacts; lubricants with carbomers/Carbopol polymers can adversely affect LBP adequacy
Absent
─ Unsatisfactory if insufficient squamous epithelial cells below the minimum estimated numbers (unless atypia present or other specific exceptions for low cellularity are met)
Note
─ Any specimen with ASC-US or a more significant epithelial abnormality is, by definition, satisfactory for evaluation
─ Laboratories should not rigidly apply the 5,000 cell threshold for LBP in vaginal and post-therapy specimens
─ Reporting of EC/TZ component is a quality indicator, though its absence in a negative Pap test does not necessarily mandate early repeat screening
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NILM
(Negative for Intraepithelial Lesion or Malignancy, i.e., Benign)
This category is used for specimens that show no evidence of intraepithelial neoplasia or malignancy, but may include non-neoplastic findings such as normal cellular elements, reactive changes, or organisms
Clinical
─ Management is typically routine age-appropriate screening, unless specific non-neoplastic findings (e,g,, certain organisms, endometrial cells in older women) or clinical history warrant other follow-up
Cell patterns
─ Predominantly mature superficial and intermediate squamous cells; endocervical cells and/or squamous metaplastic cells (EC/TZ component) may be present; endometrial cells may be seen (reported if woman ≥45 years)
Background
─ Generally clean or may show findings consistent with specific non-neoplastic conditions (e,g,, inflammation, cytolysis, atrophy)
Absent
─ Evidence of SIL, AGC, or carcinoma
Note
─ The Bethesda System provides detailed criteria for various normal cellular elements, non-neoplastic cellular variations, reactive changes, and organisms that fall under the NILM category
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Superficial cells (Cervix)
The most mature squamous cells, typically seen in the proliferative phase of the menstrual cycle or with estrogenic stimulation
Cell patterns
─ Large polygonal cells, often isolated or in loose sheets
Cytoplasm
─ Abundant, thin, eosinophilic (pink) or cyanophilic (blue-green); may contain keratohyaline granules
Nuclei
─ Small (~5-6 μm diameter), pyknotic (dense, condensed chromatin), centrally located
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Intermediate cells (IMCs) (Cervix)
Squamous cells from the mid-zone of the epithelium, predominant during the secretory phase, pregnancy, or with progestational agents
Cell patterns
─ Large polygonal cells, often with folded cytoplasm ("boat cells" esp in pregnancy); may show cytolysis (bare nuclei) in the presence of Döderlein bacilli (Lactobacillus)
Cytoplasm
─ Abundant, thin, typically cyanophilic (blue-green); often rich in glycogen (appearing clear or vacuolated)
Nuclei
─ Larger than superficial cell nuclei (~8-10 μm diameter), vesicular (open chromatin), finely granular chromatin, often with a longitudinal groove
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Parabasal cells (Cervix)
Immature squamous cells typically seen in atrophic smears (postmenopausal, postpartum) or from deeper layers if sampled vigorously
Cell patterns
─ Smaller, round to oval cells with a higher N:C ratio than mature squamous cells; often in sheets or isolated
Cytoplasm
─ Denser, thicker, often cyanophilic
Nuclei
─ Larger than intermediate cell nuclei (~10-12 μm diameter), round to oval, finely granular chromatin, smooth nuclear membranes; nucleoli generally inconspicuous
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Glandular cells
Normal glandular epithelial cells found in cervical cytology specimens, originating from the endocervix or endometrium
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Endocervical glandular cells
Cells lining the endocervical canal, characterized by their mucin-producing nature
Cell patterns
─ Arranged in sheets with a "honeycomb" appearance (en face view) or in strips with a "picket fence" arrangement (side view); single cells may also be present; cells larger than intermediate squamous cells, polarized
Cytoplasm
─ Abundant, finely granular or vacuolated (mucin-rich), basophilic or amphophilic; cilia may be present (tubal metaplasia often involves ciliated endocervical-type cells)
Nuclei
─ Round to oval, often basally located in columnar cells, uniform size (similar to or slightly larger than an intermediate cell nucleus); finely granular, evenly distributed chromatin; nucleoli usually small and inconspicuous but can be prominent if reactive
Absent
─ Significant nuclear atypia, hyperchromasia, or architectural disarray beyond reactive changes
Note
─ Reactive endocervical cells can show nuclear enlargement, prominent nucleoli, and some crowding but maintain overall cohesion and polarity
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Endometrial glandular cells (exfoliated)
Cells shed from the endometrium, typically seen during menses (days 1-5) and the proliferative phase (up to day 12); their presence in women ≥45 years old is reported
Clinical
─ Presence in women ≥45 years old requires clinical correlation to exclude endometrial pathology, though most are benign/physiologic
Cell patterns
─ Small, tightly cohesive, three-dimensional clusters ("exodus balls" often seen days 6-10, with central stromal cells rimmed by glandular cells); isolated cells less common and harder to identify; cells smaller than endocervical cells
Cytoplasm
─ Scant, often dense, basophilic, may be vacuolated; cell borders indistinct within clusters
Nuclei
─ Small (similar to or smaller than an intermediate cell nucleus), round to oval, often hyperchromatic and degenerated with smudgy chromatin; nucleoli usually inconspicuous but may be visible in LBP; apoptotic bodies (karyorrhexis) common within clusters
Background
─ Often bloody with inflammatory cells during menses; cleaner background in LBP
Absent
─ Significant nuclear atypia beyond degenerative changes
Note
─ Distinguishing exfoliated endometrial cells from small HSIL cells or AIS can be challenging; endometrial cells are generally smaller, more tightly clustered, and show degenerative nuclear changes rather than true dysplastic features
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Directly sampled endometrial cells (stromal & glandular)
Endometrial tissue fragments obtained by vigorous sampling, esp with endocervical brush or after cervical procedures (LEEP, cone); not considered clinically significant like exfoliated endometrial cells in older women
Cell patterns
─ Larger, more cellular, and often more organized fragments than exfoliated cells; may show glandular-stromal complexes with branching glands and dense stromal components; capillaries may be visible
Cytoplasm
─ Glandular cells: Columnar, scant to moderate; Stromal cells: Spindled, scant
Nuclei
─ Glandular cells: Round to oval, may be crowded and overlapping, variably hyperchromatic, smooth contours, inconspicuous nucleoli; mitoses may be seen in proliferative phase
─ Stromal cells: Oval to spindled, finely granular chromatin, inconspicuous nucleoli
Absent
─ Significant atypia beyond proliferative changes
Note
─ Can mimic atypical glandular cells or even HSIL due to hyperchromatic crowded groups (HCGs); recognition of biphasic (glandular and stromal) pattern and bland cytology helps in correct interpretation
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Benign Reactions
Non-neoplastic cellular responses to various stimuli such as inflammation, trauma, or hormonal changes
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Repair (Typical Repair) (Cervix)
Reactive cellular changes in squamous or glandular epithelium due to tissue injury and subsequent healing processes
Clinical
─ Often associated with inflammation, infection, trauma (e,g,, biopsy, IUD), or radiation
Cell patterns
─ Cohesive, flat sheets of cells, often with a streaming or "school of fish" appearance; cell borders usually well-defined; minimal nuclear overlap in a single plane
Cytoplasm
─ Abundant, often delicate or attenuated; may be eosinophilic or basophilic (polychromatic); vacuolization or perinuclear halos can occur; intracytoplasmic neutrophils common
Nuclei
─ Enlarged (often 1,5-2x normal intermediate or endocervical nucleus), round to oval, smooth nuclear contours; finely granular, evenly distributed chromatin, sometimes vesicular or hypochromatic; prominent, often multiple, smooth, round nucleoli are characteristic; mitoses may be present but are typical
Background
─ Often inflammatory; may contain fibrin or blood
Absent
─ Significant hyperchromasia, coarse or irregular chromatin, marked nuclear membrane irregularities, or significant loss of cohesion (features of "atypical repair" which would be classified as ASC or AGC)
Note
─ Key features are cellular cohesion, smooth nuclear outlines, fine chromatin, and prominent regular nucleoli
─ "Atypical repair" showing more significant atypia should be classified as ASC or AGC
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Metaplastic Squamous cells (Cervix)
Immature squamous cells replacing glandular epithelium, a common physiologic response in the transformation zone
Cell patterns
─ Cohesive sheets or isolated cells; cells vary from small, round/oval (immature) to larger, more polygonal (mature metaplasia); "spider cells" (cells with cytoplasmic projections) more common in conventional smears
Cytoplasm
─ Dense, often cyanophilic in immature cells; becomes more abundant and thinner with maturation
Nuclei
─ Round to oval, often slightly larger than an intermediate cell nucleus (mean area ~50 μm²); finely granular, evenly distributed chromatin; smooth nuclear membranes; nucleoli usually inconspicuous but can be prominent if reactive
Absent
─ Significant nuclear atypia (hyperchromasia, irregular contours, coarse chromatin) beyond mild reactive changes
Note
─ Immature squamous metaplasia with high N:C ratios can be a mimic of HSIL; however, metaplastic cells typically have smoother nuclear contours and finer chromatin
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Tubal metaplasia (Cervix)
Replacement of endocervical epithelium by ciliated and non-ciliated (peg) cells resembling fallopian tube epithelium; a benign finding
Cell patterns
─ Strips or small clusters of columnar cells, often with pseudostratification; cilia and/or terminal bars are diagnostic
Cytoplasm
─ Eosinophilic to amphophilic; apical cilia on ciliated cells; peg cells have scant cytoplasm
Nuclei
─ Round to oval, may be enlarged and mildly hyperchromatic; chromatin finely granular and evenly distributed; nucleoli usually inconspicuous; nuclear crowding and overlap can be prominent
Absent
─ Significant pleomorphism, coarse chromatin, or mitotic activity beyond that seen in reactive endocervical cells
Note
─ Can mimic Atypical Glandular Cells (AGC) or Adenocarcinoma in situ (AIS) due to nuclear crowding, enlargement, and hyperchromasia; identification of cilia/terminal bars is key to benign diagnosis
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Atrophy (Cervix)
Epithelial thinning due to decreased estrogen stimulation, typically seen in postmenopausal women or other low-estrogen states
Clinical
─ Smears may be sparsely cellular; inflammation (atrophic vaginitis) common
Cell patterns
─ Predominantly parabasal cells, often in flat monolayer sheets with preserved polarity or as dispersed single cells; intermediate cells may be present; superficial cells usually absent
Cytoplasm
─ Parabasal cells: Denser, cyanophilic
Nuclei
─ Parabasal cells: Round to oval, slightly larger than intermediate cell nuclei, finely granular chromatin, smooth nuclear membranes; mild hyperchromasia and nuclear enlargement may be seen; autolytic changes (stripped nuclei) can occur
Background
─ May be clean or show granular debris ("blue blobs" - inspissated mucus or degenerated cells), inflammation (atrophic vaginitis); pseudoparakeratosis (degenerated orangeophilic parabasal cells)
Absent
─ True dysplastic changes (though atrophic atypia can mimic SIL)
Note
─ Atrophic changes with atypia (ASC-US or ASC-H) should be reported if nuclear abnormalities exceed those of simple atrophy
─ Estrogen cream application can mature the epithelium and resolve atrophic atypia
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Pregnancy related changes
Navicular cells
Glycogen-rich intermediate squamous cells with a "boat-shaped" appearance, characteristic of pregnancy or progestational effect
Cell patterns
─ Intermediate squamous cells, often with folded cytoplasm imparting a boat shape; may form dense clusters
Cytoplasm
─ Abundant, basophilic to clear (due to glycogen)
Nuclei
─ Vesicular, finely granular chromatin, often eccentric
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Decidua
Hormonally stimulated endocervical or endometrial stromal cells seen during pregnancy or postpartum
Cell patterns
─ Single cells or small loose clusters; large cells
Cytoplasm
─ Abundant, granular or finely vacuolated, may have cytoplasmic processes
Nuclei
─ Large (35–50 μm² area), may be lobulated or multinucleated; finely granular, evenly distributed chromatin, normochromatic to hyperchromatic; smooth nuclear membranes; nucleoli usually prominent and basophilic
Note
─ Can be misinterpreted as LSIL or HSIL if not aware of pregnancy status; smooth nuclear contours and fine chromatin favor decidual cells
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Cytotrophoblast
Placental cells rarely seen in late pregnancy or postpartum
Cell patterns
─ Typically single cells, occasionally small clusters; small cells
Cytoplasm
─ Scant, may have prominent vacuoles
Nuclei
─ Enlarged, high N:C ratio, hyperchromasia; evenly distributed chromatin
Background
─ Often highly inflamed and sometimes bloody
Note
─ Can resemble reactive squamous cells or HSIL/ASC-H; clinical history is key
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Syncytiotrophoblast
Multinucleated placental cells rarely seen in late pregnancy or postpartum
Cell patterns
─ Large, multinucleated cells (up to 50+ nuclei)
Cytoplasm
─ Granular, often tapering at one end
Nuclei
─ Normochromatic with even chromatin distribution, often with irregular nuclear contours
Note
─ Differentiate from herpes (lacks ground-glass inclusions) and other multinucleated cells by history and nuclear features
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Arias Stella reaction
Benign glandular cell changes (endocervical or endometrial) associated with pregnancy or hormonal stimulation
Cell patterns
─ Glandular cells, singly or in clusters
Cytoplasm
─ Variable quantity, may be vacuolated
Nuclei
─ Large, hyperchromatic with contour irregularities (grooves, pseudoinclusions); granular to smudgy chromatin; multiple prominent nucleoli; N:C ratio variable, often high
Background
─ Usually inflammatory, often with leukophagocytosis
Note
─ Can mimic AGC or adenocarcinoma; history of pregnancy or hormonal stimulation is critical
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Intrauterine device (IUD) effect
Reactive glandular cell changes (endocervical or endometrial) associated with IUD use
Cell patterns
─ Glandular cells singly or in small clusters (usually 5–15 cells); signet-ring appearance due to large cytoplasmic vacuoles displacing nucleus; occasional single cells with high N:C
Cytoplasm
─ Variable amount, frequently large vacuoles
Nuclei
─ May be enlarged; degenerative changes ("wrinkled" chromatin, nuclear "cracking") may be present; nucleoli may be prominent
Background
─ Often clean; Actinomyces-like organisms may be present (up to 25% of cases)
Absent
─ True features of malignancy (though can mimic adenocarcinoma or HSIL)
Note
─ Changes may persist for months after IUD removal; if atypia is concerning, recommend repeat Pap after IUD removal or further investigation
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Parakeratosis (Cervix)
Miniature superficial squamous cells with dense orangeophilic/eosinophilic cytoplasm and small pyknotic nuclei; a reactive change
Cell patterns
─ Miniature superficial squamous cells, isolated, in sheets, or whorls; round, oval, polygonal, or spindle-shaped
Cytoplasm
─ Dense, orangeophilic or eosinophilic
Nuclei
─ Small (~10 μm² area), dense (pyknotic)
Absent
─ Significant nuclear atypia (if present, consider ASC or SIL)
Note
─ "Atypical parakeratosis" (with nuclear atypia) is classified as ASC or SIL
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Hyperkeratosis (Cervix)
Anucleate mature polygonal squamous cells, often associated with keratohyaline granules; a reactive change
Cell patterns
─ Anucleate mature polygonal squamous cells, isolated or in plaques
Cytoplasm
─ Mature, polygonal; may show keratohyaline granules
Nuclei
─ Absent; "ghost nuclei" (empty spaces) may be noted
Absent
─ Nuclear atypia in accompanying nucleated cells (if atypia present, consider ASC or SIL)
Note
─ Extensive hyperkeratosis may obscure underlying lesions; vulvar contamination can also introduce anucleate squames
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Lymphocytic (Follicular) Cervicitis
Chronic cervicitis with formation of lymphoid follicles in the subepithelium
Cell patterns
─ Polymorphous population of lymphocytes (small lymphocytes, centrocytes, centroblasts, immunoblasts, plasma cells); tingible body macrophages often present; germinal center fragments may be seen
Background
─ Lymphoglandular bodies
Note
─ In LBP, lymphocytes may be more dispersed or in loose aggregates; in CP, often in clusters or mucus strands
─ DDx includes HSIL (small cell type) and lymphoma; polymorphous population and presence of tingible body macrophages favor benign
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Radiation (Cervix)
Cellular changes due to ionizing radiation, which can persist long-term
Cell patterns
─ Marked cytomegaly with proportional karyomegaly (N:C ratio often preserved); bizarre cell shapes; multinucleation common
Cytoplasm
─ Often abundant, vacuolated, or polychromatic (two-toned); intracytoplasmic neutrophils
Nuclei
─ Variably sized, some very large; mild hyperchromasia; degenerative changes (pallor, wrinkling, smudging of chromatin, vacuolization); nucleoli may be prominent (esp with repair)
Absent
─ True malignant features (though can mimic SIL or carcinoma)
Note
─ Acute changes resolve within ~6 months; chronic changes can persist indefinitely
─ Distinguish from recurrent malignancy (more hyperchromasia, irregular chromatin, higher N:C in malignancy)
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Glandular cells status post hysterectomy
Benign endocervical-like glandular cells in vaginal smears after hysterectomy
Cell patterns
─ Benign-appearing endocervical-type glandular cells; goblet cell or mucinous metaplasia may be seen
Note
─ Origin may be vaginal adenosis, metaplasia, or prolapsed fallopian tube (if supracervical hysterectomy, from cervical stump)
─ If not atypical, no clinical significance; reporting is optional
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Contaminants and miscellaneous (Cervix)
Extraneous elements or non-cervical/vaginal cells sometimes encountered in cervical cytology specimens
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Spermatozoa
Male germ cells, may be seen in cervical cytology specimens
Cell patterns
─ Characteristic oval head with a dense, dark nucleus and a pale anterior acrosomal cap; long, delicate flagellum (tail) often visible
Note
─ Presence is usually of no clinical significance in routine screening; may be noted if relevant to clinical history (e,g,, postcoital sample, fertility assessment, forensic cases)
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Pollen grains (Cervix)
Airborne plant microspores, common environmental contaminants
Cell patterns
─ Variably sized and shaped (round, oval, triangular), often with a thick, refractile, and sometimes sculptured cell wall; may appear yellow, brown, or refractile; internal contents may or may not be visible
Note
─ Can be mistaken for fungal spores or parasite ova if morphology is not carefully assessed; usually larger and more complex than true pathogens
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Lubricant (Cervix)
Material used during speculum insertion, which can contaminate the cytologic sample
Cell patterns
─ Appears as amorphous, stringy, granular, or gel-like material, often basophilic or purple; may obscure epithelial cells or cause cellular distortion
Background
─ Can cause a "streaky" or "clumpy" appearance, esp in LBP
Note
─ Certain lubricants (esp those containing carbomers or Carbopol polymers) can significantly impair LBP adequacy, leading to unsatisfactory specimens due to scant cellularity or obscuration
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Other contaminants (Cervix)
Includes various fibers (e,g,, cotton, synthetic), talc (from gloves, though less common now), starch granules, and other debris
Cell patterns
─ Fibers are elongated, refractile structures; talc appears as small, birefringent crystals under polarized light; starch granules are round to oval with a central hilum, often showing a "Maltese cross" pattern under polarized light
Note
─ Usually easily recognizable and of no clinical significance, but extensive contamination can obscure cellular detail
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Trichomonas vaginalis (Cervix)
A flagellated protozoan parasite, a common cause of vaginitis
Clinical
─ May cause itching, burning, and a malodorous, frothy, yellow-green vaginal discharge; many infections are asymptomatic
─ Sexually transmitted infection
Cell patterns
─ Pear-shaped or oval organisms, typically 15-30 μm long (variable size); pale, eccentrically placed nucleus; reddish cytoplasmic granules (often inconspicuous); flagella usually not visible on Pap stain; often associated with a polymorphous inflammatory infiltrate and "cannonball" clusters of neutrophils on squamous cells ("Trich parties")
Background
─ Often inflammatory, with neutrophils; "leptothrix" (long, filamentous bacteria) frequently coexists; perinuclear halos in squamous cells ("pseudokoilocytosis") may be seen but lack the nuclear atypia of true koilocytes
Absent
─ True hyphae or budding yeast (to distinguish from Candida)
Note
─ Reporting is recommended by Bethesda; treatment of patient and partners is indicated
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Candida (Cervix)
Yeast and pseudohyphae, common cause of vulvovaginal candidiasis ("yeast infection")
Clinical
─ May cause itching, burning, and a thick, white, "cottage cheese-like" vaginal discharge; many colonizations are asymptomatic
Cell patterns
─ Budding yeast forms (3-7 μm diameter) and/or pseudohyphae (chains of elongated budding yeast cells); true hyphae may also be present; typically stain pink/eosinophilic or basophilic; "shish kebab" arrangement (squamous cells skewered by pseudohyphae) may be seen
Background
─ Variable inflammation; squamous cells may show reactive changes
Absent
─ True septate hyphae with acute angle branching (seen in Aspergillus, a rare contaminant/pathogen)
Note
─ Reporting is recommended by Bethesda; treatment usually for symptomatic women
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Bacterial vaginosis (BV) / Gardnerella vaginalis
A polymicrobial clinical syndrome resulting from replacement of normal Lactobacillus-predominant vaginal flora with high concentrations of anaerobic bacteria (e,g,, Gardnerella vaginalis, Prevotella spp, Atopobium vaginae, Mobiluncus spp)
Clinical
─ May cause a thin, homogeneous, malodorous (fishy) vaginal discharge and elevated vaginal pH (>4,5); many cases are asymptomatic
─ Associated with adverse obstetric outcomes (e,g,, preterm labor) and increased risk of acquiring STIs
Cell patterns
─ "Clue cells" (squamous cells coated by a lawn of coccobacilli, obscuring cell borders); marked decrease or absence of normal Lactobacilli; predominance of small, pleomorphic coccobacillary forms
Background
─ Often "filmy" or granular due to numerous bacteria; neutrophils usually sparse or absent (unless co-infection)
Absent
─ Predominance of Lactobacilli; significant numbers of Trichomonas or Candida (though co-infections can occur)
Note
─ Reporting is recommended by Bethesda; diagnosis of BV is clinical (Amsel criteria or Nugent score on Gram stain), but cytology can suggest the diagnosis
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Actinomyces (Cervix)
Anaerobic or microaerophilic Gram-positive filamentous bacteria
Clinical
─ Strongly associated with intrauterine device (IUD) use, esp long-term; most women are asymptomatic carriers
─ Rarely, can cause pelvic actinomycosis (an invasive infection)
Cell patterns
─ Dense, tangled clumps of filamentous bacteria ("cotton balls" or "dust bunnies"), often with a radiating periphery; individual filaments are thin and branching; may be associated with neutrophils
Background
─ Often clean, but can be inflammatory if associated with IUD effect or infection
Absent
─ True fungal hyphae or yeast forms
Note
─ Reporting is recommended by Bethesda; clinical significance in asymptomatic IUD users is controversial, treatment usually not indicated unless symptomatic or pelvic infection suspected
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Herpes Simplex Virus (HSV) (Cervix)
Viral cytopathic effect due to HSV-1 or HSV-2 infection
Clinical
─ Primary infection may cause painful genital vesicles, ulcers, fever, and lymphadenopathy; recurrent episodes are usually milder
─ Viral shedding can occur in the absence of visible lesions
Cell patterns
─ The "3 Ms": Multinucleation, Nuclear molding (nuclei indenting each other), and Margination of chromatin (condensed along nuclear membrane); "ground glass" appearance of nuclei (homogeneous, pale, opaque chromatin); +/- distinct eosinophilic intranuclear inclusions (Cowdry type A)
Background
─ May be inflammatory
Absent
─ Cilia (to distinguish from multinucleated endocervical cells); prominent nucleoli (unless reactive changes superimposed)
Note
─ Reporting is recommended by Bethesda; antiviral treatment can manage outbreaks but does not eradicate latent virus
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Cytomegalovirus (CMV) (Cervix)
Viral cytopathic effect, rare in cervical cytology, usually seen in immunocompromised individuals
Clinical
─ Most infections are asymptomatic in immunocompetent hosts; can cause significant disease in immunocompromised patients or congenital infection
Cell patterns
─ Marked cytomegaly and karyomegaly of single cells (often glandular or stromal); characteristic large, basophilic, intranuclear "owl's eye" inclusion surrounded by a clear halo; smaller granular basophilic cytoplasmic inclusions may also be present
Background
─ Variable
Absent
─ Multinucleation and nuclear molding typical of HSV
Note
─ Reporting is recommended by Bethesda; clinical significance depends on host immune status
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Atypical Squamous Cells of Undetermined Significance (ASC-US)
Cytologic changes suggestive of a Squamous Intraepithelial Lesion (SIL) that are qualitatively or quantitatively insufficient for a definitive interpretation; encompasses atypia that is more marked than reactive changes but falls short of LSIL
Clinical
─ Most common epithelial abnormality reported
─ Risk of underlying HSIL (CIN 2/3) on biopsy is ~10-20%; risk of invasive cancer is low (~0,1-0,2%)
─ Management typically involves HPV testing (reflex or co-testing); if HPV positive, colposcopy is indicated; if HPV negative, co-testing in 3 years is recommended for women ≥25 years
Cell patterns
─ Usually mature superficial or intermediate-type squamous cells, singly or in sheets; atypical parakeratosis or cells with incomplete koilocytic features may be present
Cytoplasm
─ Generally abundant, similar to normal mature squamous cells; may show perinuclear halos or vacuolization suggestive but not diagnostic of koilocytosis; dense orangeophilic cytoplasm in atypical parakeratotic cells
Nuclei
─ Enlarged, approximately 2,5 to 3 times the area of a normal intermediate cell nucleus (or twice the size of a normal squamous metaplastic cell nucleus)
─ N:C ratio slightly increased but generally <50%
─ Mild hyperchromasia; chromatin evenly distributed or slightly granular; nuclear contours may be minimally irregular
─ Binucleation or multinucleation may be present
Background
─ Variable; may be clean or inflammatory
Absent
─ Definitive features of LSIL (esp unequivocal koilocytes with diagnostic nuclear atypia) or HSIL
Note
─ ASC-US is an interpretation of the entire specimen, not just individual cells
─ Criteria for ASC-US may differ subtly among labs due to variations in stains and preparation techniques
─ Common patterns include: Atypical parakeratosis (APK), atypical repair, and atypia in postmenopausal women/atrophy
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Atypical Squamous Cells, cannot exclude HSIL (ASC-H)
Cytologic changes suggestive of HSIL that are qualitatively or quantitatively insufficient for a definitive interpretation; reserved for a minority of ASC cases (<10% of all ASC)
Clinical
─ Higher risk of underlying HSIL (CIN 2/3) on biopsy than ASC-US (~25-50%, can be higher); risk of invasive cancer also higher than ASC-US but still low
─ Management is colposcopy, regardless of HPV status (reflex HPV testing not recommended for ASC-H)
Cell patterns
─ Usually immature squamous metaplastic-type cells, often in small groups (<10-15 cells) or as single cells; may present as "crowded sheet pattern" or atypical repair concerning for HSIL/cancer; cells often smaller than typical ASC-US cells
Cytoplasm
─ Often scant and dense (metaplastic type); N:C ratio is significantly increased, often approximating that of HSIL
Nuclei
─ Enlarged (may be only 1,5-2,5 times larger than normal metaplastic nucleus but N:C ratio is high)
─ Hyperchromasia, often with irregular chromatin distribution or coarse granularity
─ Nuclear contours frequently irregular, with notching or indentations
─ Nucleoli generally absent
Background
─ Variable; may be clean or inflammatory
Absent
─ Unequivocal features of HSIL (esp in terms of quantity of abnormal cells or classic HSIL morphology)
DDx
─ HSIL (esp small cell HSIL or poorly preserved HSIL)
─ Immature squamous metaplasia with reactive changes (can have high N:C ratio but nuclei usually smoother and chromatin finer)
─ Atrophy with degeneration (can show hyperchromasia and some nuclear irregularity, but N:C ratio usually not as high as HSIL)
─ Reactive endocervical cells or tubal metaplasia (beware of "endocervical cells seen on end" mimicking small atypical squamous cells)
─ AIS (if glandular features are subtle and cells appear in crowded groups)
Note
─ ASC-H is intended for cases where HSIL is a significant concern, but the changes are not definitive
─ Common patterns include "atypical immature metaplasia" (small cells with high N:C ratios) and "crowded sheet pattern"
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Low-Grade Squamous Intraepithelial Lesion (LSIL)
Encompasses human papillomavirus (HPV) cytopathic effect (koilocytosis) and what was formerly termed mild dysplasia or Cervical Intraepithelial Neoplasia grade 1 (CIN 1)
Clinical
─ Caused by HPV infection (both low-risk and high-risk types)
─ Most LSILs represent transient HPV infections and regress spontaneously, esp in young women (<25 years)
─ Risk of underlying HSIL (CIN 2/3) on biopsy is ~15-30%
─ Management for women ≥25 years is colposcopy; for women 21-24 years, repeat cytology at 12 months is preferred; HPV co-testing with LSIL cytology is generally not recommended for triage due to high rates of HPV positivity
Cell patterns
─ Cells usually mature superficial or intermediate type, occurring singly, in sheets, or loose clusters; koilocytes (cells with perinuclear cavitation and nuclear atypia) are pathognomonic but not required for diagnosis
Cytoplasm
─ Abundant, mature (superficial or intermediate type); koilocytotic change includes a sharply defined, broad perinuclear clear zone (halo) with a peripheral rim of condensed, often densely stained cytoplasm
Nuclei
─ Enlarged (at least 3 times the area of a normal intermediate nucleus, or ~100-175 μm² area); N:C ratio is low but slightly increased
─ Hyperchromasia is common, chromatin may be smudgy, coarsely granular, or opaque
─ Nuclear contours often irregular (wrinkled, "raisinoid") but can be smooth
─ Binucleation or multinucleation common
─ Nucleoli generally absent or inconspicuous
Background
─ Variable; may be clean or inflammatory
Absent
─ Features of HSIL (esp significantly increased N:C ratio in immature-appearing cells, marked hyperchromasia with very coarse chromatin)
DDx
─ Reactive changes with "pseudokoilocytosis" (e,g,, Trichomonas infection, glycogen effect): Perinuclear halos are usually smaller, less well-defined, and lack significant nuclear atypia (esp hyperchromasia and irregular contours)
─ ASC-US: Nuclear atypia or koilocytic features are suggestive but quantitatively or qualitatively insufficient for LSIL
─ HSIL: Cells usually smaller with higher N:C ratio and more severe nuclear atypia
Note
─ Koilocytosis is the hallmark of HPV infection; to be diagnostic, koilocytes must exhibit both the characteristic cytoplasmic halo and nuclear atypia (enlargement, hyperchromasia, irregular contours)
─ Non-koilocytic LSIL is diagnosed based on nuclear atypia in mature squamous cells that exceeds ASC-US criteria but falls short of HSIL
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High-Grade Squamous Intraepithelial Lesion (HSIL)
Encompasses what was formerly termed moderate and severe dysplasia, carcinoma in situ (CIS), CIN 2, and CIN 3; represents a true precancerous lesion
Clinical
─ Caused by persistent infection with high-risk HPV types (esp HPV 16 and 18)
─ Higher risk of progression to invasive squamous cell carcinoma if untreated compared to LSIL
─ Risk of underlying invasive cancer on biopsy is ~1-2% for cytologic HSIL
─ Management is colposcopy for all non-pregnant women; see-and-treat (excisional procedure) is an acceptable option for women ≥25 years if HSIL is present and colposcopy adequate
Cell patterns
─ Cells usually smaller than LSIL cells, often immature (metaplastic or parabasal-like); occur singly, in sheets, or syncytial-like aggregates (hyperchromatic crowded groups, HCGs)
Cytoplasm
─ Scant and often dense (immature/metaplastic type), but can be delicate or occasionally keratinized; N:C ratio is markedly increased (generally >50-60%)
Nuclei
─ Enlarged (may be similar in size to LSIL nuclei, but N:C ratio is much higher; or nuclei may be smaller than LSIL but still disproportionately large for cell size)
─ Hyperchromasia is usually marked; chromatin often coarsely granular and irregularly distributed, but can be finely granular or even hypochromatic
─ Nuclear contours are very irregular, with notching, indentations, and angulation
─ Nucleoli generally absent or inconspicuous
─ Mitotic figures may be seen, esp in tissue fragments
Background
─ Variable; may be clean, inflammatory, or show tumor diathesis if associated with invasive cancer or extensive necrosis
Absent
─ Features of LSIL (esp koilocytosis with only mild nuclear atypia and low N:C ratio)
─ Unequivocal features of invasive squamous cell carcinoma (e,g,, macronucleoli, definite tumor diathesis, bizarre cell shapes in keratinizing SCC)
DDx
─ LSIL: Larger cells, lower N:C ratio, less severe nuclear atypia
─ ASC-H: Atypical features suggestive of HSIL but quantitatively or qualitatively insufficient
─ Atrophy with reactive atypia or degeneration: Can mimic HSIL due to high N:C ratio and hyperchromasia; atrophic cells typically have smoother nuclear contours, finer chromatin (unless degenerated), and lack the marked irregularity of HSIL
─ Immature squamous metaplasia (reactive): Can have high N:C ratio, but nuclei are usually round/oval with smooth contours and fine, evenly distributed chromatin
─ Endometrial cells or directly sampled lower uterine segment: Can form HCGs; endometrial cells are smaller, often degenerated, and may have associated stroma; directly sampled LUS has biphasic pattern
─ AIS/AGC: Glandular features (columnar shape, feathering, rosettes, true glandular lumina) distinguish from HSIL, though HSIL involving glands can be a pitfall
Note
─ HSIL is a spectrum; "small cell HSIL" (CIN3-like) has very high N:C ratios and scant cytoplasm; "large cell HSIL" (CIN2-like) has slightly more cytoplasm but still high N:C and significant nuclear atypia
─ Keratinizing HSIL shows dense, orangeophilic cytoplasm with marked nuclear atypia; may mimic invasive keratinizing SCC
─ p16 immunohistochemistry is often diffusely positive (block positivity) in HSIL and can be helpful in biopsy correlation but is not typically used on cytology specimens for primary diagnosis
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Atypical Glandular Cells (AGC)
Glandular cells (endocervical, endometrial, or not otherwise specified) that display nuclear atypia exceeding obvious reactive or reparative changes but lacking unequivocal features of endocervical adenocarcinoma in situ (AIS), invasive adenocarcinoma, or endometrial carcinoma
Clinical
─ AGC is an uncommon interpretation (0,1-0,5% of Pap tests)
─ Associated with a higher risk of significant underlying pathology (SIL, esp HSIL; AIS; adenocarcinoma; endometrial carcinoma) compared to ASC-US
─ Risk of CIN 2/3+ is ~10-40%; risk of AIS or invasive adenocarcinoma is ~3-10%; risk of endometrial cancer (esp with atypical endometrial cells) varies by age and symptoms
─ Management for all AGC categories (except atypical endometrial cells) is colposcopy with endocervical sampling; endometrial sampling is also indicated for women ≥35 years or those <35 with risk factors for endometrial cancer (e,g,, abnormal bleeding, obesity, anovulation)
─ For atypical endometrial cells, endometrial and endocervical sampling is indicated; colposcopy may be deferred if endometrial pathology is identified
─ HPV testing may be useful in risk stratification for some AGC categories
Note
─ The Bethesda System recommends qualifying AGC as to endocervical or endometrial origin if possible; if not, "AGC, Not Otherwise Specified (NOS)" is used
─ "Atypical Endocervical Cells, NOS" and "Atypical Glandular Cells, NOS" may be further qualified as "favor neoplastic" if features are more worrisome
─ "Atypical Endometrial Cells" are not further qualified as "favor neoplastic"
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Atypical Endocervical Cells, Not Otherwise Specified
Endocervical-type cells displaying nuclear atypia that exceeds obvious reactive or reparative changes but lacks unequivocal features of endocervical adenocarcinoma in situ (AIS) or invasive adenocarcinoma
Cell patterns
─ Sheets or strips of endocervical-type cells with some cell crowding, nuclear overlap, and/or pseudostratification; cells usually maintain some polarity
Cytoplasm
─ May be fairly abundant, but N:C ratio is increased compared to normal endocervical cells; cell borders often discernible
Nuclei
─ Enlarged (up to 3-5 times normal endocervical nucleus area); some variation in nuclear size and shape; mild hyperchromasia; mild chromatin irregularity; occasional small nucleoli; mitotic figures rare
Background
─ Variable, may be clean or inflammatory
Absent
─ Unequivocal features of AIS or invasive adenocarcinoma (e,g,, numerous complex groups with feathering/rosettes, marked hyperchromasia, coarse chromatin, prominent irregular nucleoli, frequent mitoses/apoptosis)
DDx
─ Reactive endocervical cells (less crowding, smoother nuclei, finer chromatin, prominent but regular nucleoli)
─ Tubal metaplasia (cilia or terminal bars, often more nuclear elongation and finer chromatin)
─ Directly sampled lower uterine segment (LUS) or endometrium (often larger fragments, biphasic pattern with stroma, less atypia)
─ AIS or adenocarcinoma (more severe atypia, more complex architecture, more discohesion)
─ HSIL involving glands (squamous features in some cells, more irregular chromatin, lack of true glandular architecture)
Note
─ This is a heterogeneous category; includes changes that may be reactive mimics or true glandular neoplasia
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Atypical Endocervical Cells, Favor Neoplastic
Endocervical-type cells with cytologic and architectural features quantitatively or qualitatively borderline for, but highly suspicious of, endocervical adenocarcinoma in situ (AIS) or invasive adenocarcinoma
Cell patterns
─ Sheets, strips, or three-dimensional clusters with nuclear crowding, overlap, and pseudostratification; rare cell groups with rosettes or feathering may be present
Cytoplasm
─ Scant to moderate; N:C ratio increased
Nuclei
─ Enlarged, often elongated or irregular; hyperchromasia common; chromatin may be coarse and irregularly distributed; nucleoli may be prominent; occasional mitoses or apoptotic bodies
Background
─ Variable, may be clean or contain some debris
Absent
─ Unequivocal features of AIS or invasive adenocarcinoma (often a quantitative issue – too few abnormal groups)
DDx
─ AIS or invasive adenocarcinoma (distinction may be based on quantity of abnormal cells or subtlety of features)
─ Reactive endocervical changes or tubal metaplasia (less atypia, cilia in tubal metaplasia)
─ HSIL involving glands (squamous features, different chromatin pattern)
Note
─ This category carries a higher risk of significant glandular neoplasia than AGC-EC, NOS
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Atypical Endometrial Cells
Cells interpreted as endometrial in origin that display nuclear atypia beyond that of benign exfoliated or directly sampled endometrial cells, but lacking unequivocal features of endometrial adenocarcinoma
Clinical
─ Esp concerning in postmenopausal women or those with abnormal bleeding
─ Management involves endometrial and endocervical sampling
Cell patterns
─ Small groups (usually 5-10 cells) or isolated cells; cells often small and degenerated
Cytoplasm
─ Scant, often basophilic, may be vacuolated; cell borders poorly defined
Nuclei
─ Slightly enlarged compared to normal endometrial cells (may be only 1,5-2x intermediate nucleus); mild to moderate hyperchromasia; chromatin heterogeneity; nucleoli may be small but visible (esp in LBP)
Background
─ Variable; may be bloody or contain inflammatory cells or diathesis (esp if adenocarcinoma present)
Absent
─ Unequivocal features of endometrial adenocarcinoma (e,g,, numerous atypical cells, prominent nucleoli, definite tumor diathesis)
DDx
─ Benign exfoliated endometrial cells (smaller nuclei, more degenerative changes, less atypia)
─ Directly sampled LUS/endometrium (larger fragments, biphasic pattern, less atypia)
─ Endometrial adenocarcinoma (more severe atypia, often more cellular, tumor diathesis)
─ HSIL (can mimic small endometrial cells but usually has coarser chromatin, more irregular nuclear contours, and lacks glandular features)
─ IUD effect (vacuolated cytoplasm, but nuclear changes usually degenerative or reactive)
Note
─ This category is not further qualified as "favor neoplastic" due to difficulty in reliable subclassification
─ Watery diathesis (granular proteinaceous background) is suggestive of endometrial adenocarcinoma
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Squamous cell carcinoma (SCC) (Cervix)
An invasive malignancy composed of squamous cells, which may be keratinizing or non-keratinizing; most arise from pre-existing HSIL
Clinical
─ Symptoms may include abnormal vaginal bleeding (esp postcoital), vaginal discharge, or pain; many early SCCs are asymptomatic and detected by screening
─ Most SCCs are associated with high-risk HPV infection (esp HPV 16 and 18)
─ Management depends on stage and includes surgery, radiation, and/or chemotherapy
Cell patterns
─ Variable, depending on differentiation; may present as single cells, cohesive sheets, or syncytial-like aggregates; bizarre cell shapes (tadpole, spindle cells) common in keratinizing type
Cytoplasm
─ Keratinizing SCC: Often dense, orangeophilic or eosinophilic ("hard" cytoplasm); bizarre shapes
─ Non-keratinizing SCC: Usually less abundant, cyanophilic or amphophilic, more delicate; cell borders less distinct
Nuclei
─ Markedly atypical: Enlarged, pleomorphic, hyperchromatic (often with irregular, coarsely clumped chromatin); irregular nuclear contours are prominent; macronucleoli common in non-keratinizing SCC, often pyknotic/obscured in keratinizing SCC
Background
─ Often contains tumor diathesis (granular proteinaceous debris, old blood, necrotic tumor cells); acute inflammation common
Absent
─ Features of a benign process or lower-grade SIL (unless co-existing)
Ancillary studies
─ p16 IHC is usually diffusely positive (block-like staining) but is not specific for invasion
─ HPV testing is usually positive for high-risk types
DDx
─ HSIL (esp keratinizing HSIL): Lacks definite tumor diathesis and often has less pleomorphism and less prominent macronucleoli than invasive SCC
─ Repair/Reactive changes: Can show prominent nucleoli and some atypia but lack the marked hyperchromasia, coarse chromatin, and significant pleomorphism of SCC; diathesis absent
─ Adenocarcinoma: Glandular features (acini, columnar shape, mucin) distinguish from SCC, though poorly differentiated tumors can overlap
─ Metastatic SCC from other sites: Clinical history is key
Note
─ Cytologic grading (well, moderately, poorly differentiated) is not typically reported in Pap tests as it has limited clinical utility and reproducibility
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Non-keratinizing SCC (including basaloid) (Cervix)
A subtype of squamous cell carcinoma characterized by malignant cells lacking significant keratinization
Cell patterns
─ Syncytial aggregates and single cells; cells often smaller than keratinizing SCC, may have a basaloid appearance with scant cytoplasm
Cytoplasm
─ Scant to moderate, typically cyanophilic or amphophilic, indistinct cell borders
Nuclei
─ Hyperchromatic, with coarsely clumped, irregularly distributed chromatin; parachromatin clearing often evident; nuclear contours irregular; prominent nucleoli and/or macronucleoli are characteristic
Background
─ Tumor diathesis (necrotic debris, old blood) often prominent
Absent
─ Significant cytoplasmic keratinization (orangeophilia, dense "hard" cytoplasm, bizarre cell shapes like tadpoles or fiber cells)
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Keratinizing SCC (Cervix)
A subtype of squamous cell carcinoma characterized by malignant cells showing obvious keratinization
Cell patterns
─ Predominantly isolated single cells, less commonly in aggregates; marked variation in cell size and shape, with caudate (tadpole) and spindle cells often present
Cytoplasm
─ Dense, "hard", orangeophilic or eosinophilic; keratin pearls may be seen (rarely in smears)
Nuclei
─ Often pyknotic and hyperchromatic, obscuring chromatin detail; when discernible, chromatin is coarse and irregularly distributed; nuclear contours markedly irregular; macronucleoli less common or obscured by pyknosis compared to non-keratinizing SCC
Background
─ Tumor diathesis may be present but can be less prominent or different in quality (more keratin debris) than in non-keratinizing SCC
Absent
─ Predominance of non-keratinized malignant cells
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Adenocarcinoma (Cervix)
Malignant glandular neoplasms of the female genital tract that can be detected by cervical cytology include endocervical adenocarcinoma, endometrial adenocarcinoma, and, rarely, extrauterine adenocarcinomas (e,g,, ovarian, fallopian tube, metastatic from other sites)
Clinical
─ Endocervical adenocarcinoma is increasing in incidence, esp in younger women; most are HPV-related (esp HPV 18 and 16)
─ Endometrial adenocarcinoma is primarily a disease of postmenopausal women; symptoms include abnormal bleeding
─ Cytologic detection of adenocarcinoma can be challenging due to overlapping features with benign reactive changes, AGC, and AIS
Cell patterns
─ Variable, depending on origin and differentiation; generally show crowded groups, sheets, strips, rosettes, or papillae; single malignant cells often present
Cytoplasm
─ Variable, from scant to abundant; may be mucinous, clear, or eosinophilic; N:C ratio usually high
Nuclei
─ Enlarged, pleomorphic, often with irregular contours; hyperchromasia with coarse, irregularly distributed chromatin; macronucleoli common
Background
─ May be clean or show tumor diathesis (granular debris, old blood, necrosis), esp with invasive lesions
Absent
─ Definitive squamous differentiation (unless adenosquamous carcinoma)
Ancillary studies
─ IHC for p16 (diffuse block-like staining often seen in HPV-related endocervical adenocarcinomas/AIS), CEA, ER/PR, vimentin, and HPV DNA testing can aid in distinguishing endocervical from endometrial origin and from benign mimics
DDx
─ Reactive endocervical/endometrial cells; tubal metaplasia; Arias-Stella reaction; IUD effect; AIS; HSIL involving glands; metastatic adenocarcinoma
Note
─ The Bethesda System specifies reporting adenocarcinoma by probable site of origin if possible (endocervical, endometrial, extrauterine) or as Adenocarcinoma, Not Otherwise Specified (NOS)
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Endocervical Adenocarcinoma in situ (AIS)
A precursor to invasive endocervical adenocarcinoma, characterized by replacement of normal endocervical epithelium by cytologically malignant glandular cells confined to the native glandular structures
Clinical
─ Often associated with concurrent HSIL or invasive SCC; most are HPV-related (esp HPV 18)
─ Management typically involves excisional procedure (cone biopsy) to exclude invasion and assess margins
Cell patterns
─ Crowded sheets, strips, rosettes, or "feathered" groups of columnar cells; loss of normal honeycomb architecture; pseudostratification common; single atypical cells rare
Cytoplasm
─ Scant to moderate, often basophilic or amphophilic; mucin depletion common in usual type; N:C ratio increased
Nuclei
─ Enlarged (2-3x normal endocervical nucleus), oval to elongated, often cigar-shaped; hyperchromatic with coarsely granular, evenly distributed chromatin; nuclear membrane irregularities usually subtle; nucleoli generally inconspicuous or small; mitotic figures and apoptotic bodies common
Background
─ Usually clean; tumor diathesis absent (by definition, as it's an in situ lesion)
Absent
─ Stromal invasion; features of squamous differentiation (unless co-existing SIL)
Ancillary studies
─ IHC: (+) p16 (strong, diffuse block-like staining), CEA (cytoplasmic); (-) ER, PR, vimentin (usually)
─ HPV DNA testing usually positive for high-risk types (esp HPV 18)
DDx
─ Reactive endocervical cells/repair (less crowding, smoother nuclei, prominent but regular nucleoli, no feathering/rosettes usually)
─ Tubal metaplasia (cilia, less nuclear atypia, more nuclear elongation)
─ Directly sampled LUS/endometrium (biphasic pattern, less atypia)
─ Invasive endocervical adenocarcinoma (may show macronucleoli, tumor diathesis, more discohesion)
─ HSIL involving glands (squamous features, more irregular chromatin, p16+ but different cell morphology)
Note
─ Cytologic features can overlap with invasive endocervical adenocarcinoma; biopsy is required for definitive diagnosis and to rule out invasion
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Endocervical Adenocarcinoma
An invasive malignancy arising from the endocervical glands
Clinical
─ May present with abnormal bleeding, discharge, or be detected by screening
─ Most are HPV-related (esp HPV 18 and 16); non-HPV related types (e,g,, gastric-type, clear cell) exist and have different morphology/prognosis
Cell patterns
─ Highly cellular; crowded sheets, strips, clusters, papillae, or acinar structures; single malignant cells common; loss of polarity and architectural disarray
Cytoplasm
─ Variable: mucinous (usual type, intestinal, signet-ring), clear (clear cell type), eosinophilic (serous type); N:C ratio usually markedly increased
Nuclei
─ Enlarged, pleomorphic, irregular contours; hyperchromatic with coarse, irregularly distributed chromatin; parachromatin clearing often seen; macronucleoli common and often irregular; mitotic figures, including atypical forms, may be frequent
Background
─ Tumor diathesis (necrotic debris, old blood) often present, esp in LBP as "clinging diathesis"
Absent
─ Ovarian-type stroma; definitive squamous differentiation (unless adenosquamous)
Ancillary studies
─ IHC: (+) p16 (diffuse, HPV-related), CEA, CK7; (-) ER, PR, vimentin (usual endocervical type); specific markers for variants (e,g,, HNF1B for clear cell; Napsin A, MUC6 for gastric type)
─ HPV DNA testing usually positive for high-risk types (usual type)
DDx
─ AIS (lacks diathesis, often less pleomorphism and fewer macronucleoli)
─ Endometrial adenocarcinoma (often ER/PR/vimentin (+), p16 patchy, CEA (-); different morphology)
─ Metastatic adenocarcinoma (clinical history, IHC panel)
─ HSIL involving glands (squamous features, different chromatin)
─ Reactive changes/repair (less atypia, no diathesis)
Note
─ Subtyping (e,g,, usual endocervical, mucinous gastric-type, endometrioid, clear cell, serous, mesonephric) is important for prognosis and management but often requires histology
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Endometrial Adenocarcinoma
An invasive malignancy arising from the endometrial glands, occasionally detected in cervical cytology
Clinical
─ Most common gynecologic malignancy in developed countries; typically affects postmenopausal women; presents with abnormal uterine bleeding
─ Risk factors include unopposed estrogen, obesity, nulliparity, tamoxifen use, Lynch syndrome
Cell patterns
─ Often scant cellularity unless high-grade or advanced stage; small, tight clusters (esp low-grade endometrioid) or more dispersed, pleomorphic cells (high-grade, serous); single cells may be present
Cytoplasm
─ Scant to moderate, often basophilic or vacuolated; intracytoplasmic neutrophils ("bag of polys") can be seen, esp in endometrioid type
Nuclei
─ Enlarged (may be only slightly in low-grade), round to irregular; hyperchromasia variable; chromatin fine to coarse; nucleoli often prominent, esp in serous and clear cell types; macronucleoli in high-grade tumors
Background
─ Often bloody, esp if symptomatic bleeding; tumor diathesis (watery, granular debris) may be present, esp with higher-grade/stage tumors
Absent
─ Definitive endocervical features (e,g,, tall columnar cells in picket-fence or honeycomb, abundant apical mucin unless mucinous endometrial variant)
Ancillary studies
─ IHC: (+) ER, PR, vimentin (esp endometrioid type); (-) CEA, p16 (or patchy); specific markers for subtypes (e,g,, p53 aberrant in serous, Napsin A in clear cell)
DDx
─ Benign endometrial cells (smaller, more degenerated, less atypia)
─ Atypical endometrial cells (lesser degree of atypia)
─ Endocervical adenocarcinoma (often ER/PR/vimentin (-), p16 diffuse block (+), CEA (+))
─ Metastatic adenocarcinoma (clinical history, IHC)
─ HSIL (can mimic small cell endometrial carcinoma; look for squamous features)
Note
─ Cytologic detection of endometrial cancer is insensitive, esp for low-grade tumors; Pap test is not a screening tool for endometrial cancer
─ "Atypical endometrial cells" should be reported if criteria for adenocarcinoma are not met
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Other Malignant Neoplasms
This category includes rare malignant tumors of the cervix and uterus, such as small cell neuroendocrine carcinoma and certain uncommon adenocarcinoma variants
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Small cell carcinoma (Cervix)
A high-grade neuroendocrine carcinoma, often associated with HPV 16/18, characterized by small, relatively uniform cells with scant cytoplasm and neuroendocrine features
Clinical
─ Rare, aggressive tumor, often presenting at an advanced stage with early metastases
─ May be associated with paraneoplastic syndromes (e,g,, Cushing syndrome due to ACTH production)
─ Prognosis is generally poor
Cell patterns
─ Small, relatively uniform cells, often in loosely cohesive clusters, sheets, or singly dispersed; nuclear molding and crush artifact common
Cytoplasm
─ Very scant, often imperceptible, cyanophilic
Nuclei
─ Round to oval or angulated, hyperchromatic; chromatin finely granular or stippled ("salt-and-pepper"), sometimes smudged; nucleoli inconspicuous or absent
Background
─ Often shows extensive necrosis, apoptotic bodies, and mitotic figures; crush artifact prominent
Absent
─ Features of squamous or typical glandular differentiation (unless a mixed tumor)
Ancillary studies
─ IHC: (+) Neuroendocrine markers (Synaptophysin, Chromogranin A, CD56, INSM1); (+) Cytokeratins (often dot-like perinuclear)
─ IHC: (+) p16 (usually diffuse block-like if HPV-related)
─ HPV DNA testing often positive for high-risk types
DDx
─ HSIL (small cell type): HSIL cells usually larger, more pleomorphic, coarser chromatin, no prominent molding or neuroendocrine marker positivity
─ Endometrial cells (exfoliated or stromal): Smaller, more degenerated, lack prominent molding and neuroendocrine markers
─ Lymphoma: Dispersed pattern, lymphoglandular bodies, (+) lymphoid markers, (-) cytokeratin
─ Embryonal rhabdomyosarcoma: Rare in adults, strap cells, (+) desmin/myogenin
Note
─ Cytologic features are identical to small cell carcinoma of other sites (e,g,, lung)
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Mucinous Carcinoma, Gastric Type (includes Minimal Deviation Adenocarcinoma/Adenoma Malignum)
A rare subtype of endocervical adenocarcinoma characterized by gastric-type mucinous differentiation, often with bland cytologic features in its well-differentiated form (Minimal Deviation Adenocarcinoma/Adenoma Malignum); typically not HPV-related
Clinical
─ May present with profuse watery or mucoid vaginal discharge
─ Minimal Deviation Adenocarcinoma (MDA) is an extremely well-differentiated variant that can be very difficult to diagnose due to its bland cytology, often requiring deep cone biopsy
─ Associated with Peutz-Jeghers syndrome in some cases
─ Prognosis variable; MDA can be aggressive despite bland morphology
Cell patterns
─ Abundant glandular cells, often in large sheets, clusters, or isolated; cells columnar with copious apical mucin or goblet cell morphology
Cytoplasm
─ Abundant, pale, foamy, or clear (gastric-type mucin); may have a yellowish tinge; goblet cells common
Nuclei
─ Minimal Deviation Adenocarcinoma: Often bland, round to oval, basally located, with smooth contours and inconspicuous nucleoli, mimicking benign endocervical cells; subtle atypia (enlargement, mild hyperchromasia, slight irregularity) may be the only clue
─ Higher-grade gastric-type mucinous carcinoma: More overt nuclear atypia, pleomorphism, hyperchromasia, and prominent nucleoli
Background
─ Abundant extracellular mucin, often thick and viscous
Absent
─ Features of usual HPV-related endocervical adenocarcinoma (e,g,, feathering, rosettes, prominent apoptosis, p16 block positivity)
─ Definitive squamous differentiation
Ancillary studies
─ IHC: (+) CK7, CEA, MUC6, HIK1083 (gastric mucin markers)
─ IHC: (-) p16 (or only patchy/focal), ER, PR, vimentin
─ HPV DNA testing usually negative
DDx
─ Benign endocervical cells/reactive changes (esp in MDA: look for subtle atypia, architectural disarray, abnormal configuration of cell groups, clinical context)
─ Usual-type endocervical adenocarcinoma/AIS (HPV-related, p16 block (+), different mucin profile)
─ Metastatic mucinous adenocarcinoma (esp from GI tract or pancreas: clinical history, IHC for site-specific markers like CDX2, CK20)
Note
─ Diagnosis of MDA on cytology is extremely challenging and often missed; high index of suspicion needed in cases with abundant bland mucinous epithelium, esp with watery discharge
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🫘Kidney
Mixed Small Tissue Fragments in Clean Background With or Without Glomeruli (Kidney Pattern 1)
Cystic Proteinaceous Background With Variable Number of Macrophages (Kidney Pattern 2)
Predominantly Dispersed Inflammatory Cells (Kidney Pattern 3)
Loosely Cohesive Tissue Fragments of Polygonal Cells With Thin Fibrovascular Strands and Dispersed Cells With Eosinophilic or Clear Cytoplasm With or Without a Hemorrhagic and/or Necrotic Background (Kidney Pattern 4)
Loosely Cohesive Papillary Tissue Fragments and Dispersed Cells With or Without a Hemorrhagic and/or Necrotic Background (Kidney Pattern 5)
Loosely Cohesive Tissue Fragments With Dispersed Atypical Cells, With or Without Necrosis and Hemorrhage (Kidney Pattern 6)
Dispersed Atypical Small Round Cells With Variable Mix of Discohesive Tissue Fragments of Epithelial or Spindle Cells With Hemorrhage and Necrosis (Kidney Pattern 7)
Mixed Cohesive Tissue Fragments of Spindle Cells and Vessels, With Fatty Globules and Spindle Cells in Bloody Background (Kidney Pattern 8)
💊Liver
Background Predominant (Liver Pattern 1)
Mildly Cellular With Small Tissue Fragments (Liver Pattern 2)
Moderately to Markedly Cellular With Tissue Fragments Ranging From Small to Large Without Dispersal (Liver Pattern 3)
Moderately to Markedly Cellular With Tissue Fragments Ranging From Small to Large and Dispersed Cells (Liver Pattern 4)
Moderately to Markedly Cellular With Dispersed Cells (Liver Pattern 5)
🛡️Lymph Node
Dispersed Hypercellular (Lymph Node Pattern 1)
Cytology
─ High cellularity
─ Predominantly dispersed, single cells with minimal cohesion
─ Clear or granular background with lymphoglandular bodies
─ Diffusely basophilic smear at low power
DDx
─ Reactive / Inflammatory
─ ─ Reactive Lymphoid Hyperplasia
─ ─ ─ Polymorphous population, tingible-body macrophages, germinal center fragments
─ ─ Infectious Mononucleosis
─ ─ ─ Polymorphous population with numerous immunoblasts and plasmacytoid cells
─ ─ Toxoplasmic Lymphadenitis
─ ─ ─ Polymorphous population with syncytial microgranulomas
─ ─ Langerhans Cell Histiocytosis
─ ─ ─ Mixed with eosinophils and characteristic Langerhans cells (nuclear grooves)
─ ─ Rosai-Dorfman Disease
─ ─ ─ Numerous large histiocytes with emperipolesis
─ Low-Grade B-Cell Lymphoma
─ ─ Small Lymphocytic Lymphoma (SLL/CLL)
─ ─ ─ Monotonous small, round lymphocytes with "block-like" chromatin; smudge cells
─ ─ Mantle Cell Lymphoma
─ ─ ─ Monotonous small, irregular/indented lymphocytes
─ ─ Follicular Lymphoma
─ ─ ─ Mix of centrocytes (cleaved) and centroblasts (large, non-cleaved)
─ High-Grade B-Cell Lymphoma
─ ─ Diffuse Large B-Cell Lymphoma (DLBCL)
─ ─ ─ Monomorphous large lymphoid cells with prominent nucleoli
─ ─ Burkitt Lymphoma
─ ─ ─ Intermediate cells with deep blue cytoplasm, lipid vacuoles, "starry sky" pattern
─ T-Cell Lymphoma
─ ─ Peripheral T-Cell Lymphoma, NOS
─ ─ ─ Heterogeneous population with highly irregular/convoluted nuclei
─ ─ Anaplastic Large Cell Lymphoma
─ ─ ─ Pleomorphic large cells with "hallmark" (reniform) nuclei
─ Precursor Lymphoid Neoplasm
─ ─ Lymphoblastic Lymphoma
─ ─ ─ Monomorphous lymphoblasts with fine chromatin, scant cytoplasm, high mitotic rate
─ Non-Lymphoid Malignancies
─ ─ Metastatic Melanoma
─ ─ ─ Pleomorphic cells, macronucleoli, intranuclear pseudoinclusions, +/- pigment
─ ─ Metastatic Seminoma
─ ─ ─ Large uniform cells, prominent nucleoli, "tigroid" background, stripped nuclei
─ ─ Metastatic Signet Ring Cell Carcinoma
─ ─ ─ Dispersed monomorphic cells with large, eccentric mucin vacuoles
Note
─ The presence of lymphoglandular bodies confirms a lymphoid aspirate but does not distinguish benign from malignant
─ The key distinction is between a polymorphous (reactive) and monomorphous (neoplastic) population
─ Flow cytometry and IHC are essential for definitive diagnosis and classification of lymphomas
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Dispersed Hypocellular (Lymph Node Pattern 2)
Cytology
─ Low cellularity
─ Predominantly dispersed, single cells
─ Background may show prominent necrosis or granular debris
DDx
─ Hodgkin Lymphoma (esp. Nodular Sclerosis)
─ ─ Look for scattered diagnostic Reed-Sternberg cells in a mixed inflammatory background
─ Granulomatous Lymphadenitis (paucicellular)
─ ─ Scattered epithelioid granulomas, +/- necrosis (e.g., caseous in TB)
─ Extensive Necrosis / Infarction
─ ─ Abundant necrotic debris with ghost cells; requires careful search for viable tumor or organisms
─ Treatment Effect / Lymphocyte Depletion
─ ─ Paucity of lymphoid cells; clinical history is essential
─ Undersampled Lesion
─ ─ Any hypercellular lesion can appear hypocellular due to sampling error
Note
─ This is a paucicellular pattern that requires a careful search for diagnostic elements
─ Extensive necrosis can be the cause of hypocellularity; the underlying etiology (infection, malignancy) must be sought
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Hypercellular Mixed Dispersed and Tissue Fragment (Lymph Node Pattern 3)
Cytology
─ High cellularity
─ Mix of dispersed single cells and cohesive tissue fragments
─ Dispersed component is typically lymphoid; cohesive component is variable (epithelial, germinal centers, granulomas)
DDx
─ Metastatic Carcinoma
─ ─ Stereotypical lesion for this pattern (partial replacement of the node)
─ Reactive Follicular Hyperplasia
─ ─ Cohesive fragments are reactive germinal centers in a polymorphous lymphoid background
─ Granulomatous Lymphadenitis
─ ─ Cohesive fragments are epithelioid granulomas
─ Hodgkin Lymphoma (Syncytial Variant)
─ ─ Cohesive fragments are syncytial aggregates of Reed-Sternberg cells
─ Metastatic Melanoma / Seminoma
─ ─ Cohesive fragments of non-epithelial malignant cells
─ Benign Nodal Inclusions
─ ─ Cohesive fragments of benign glandular or nevus cells
Note
─ This pattern is highly suspicious for metastatic carcinoma partially replacing a lymph node
─ The key to diagnosis is identifying the nature of the cohesive fragments (malignant vs. reactive)
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Hypocellular Mixed Dispersed and Tissue Fragment Pattern (Lymph Node Pattern 4)
Cytology
─ Low cellularity
─ Mix of dispersed single cells and cohesive tissue fragments
─ Background may show prominent necrosis or sclerosis
DDx
─ Metastatic Carcinoma with Sclerosis/Necrosis
─ ─ Can be treatment-related or a feature of the tumor (e.g., colorectal, squamous)
─ Necrotizing Granulomatous Lymphadenitis
─ ─ Paucicellular smear with scattered granulomas and extensive necrosis (e.g., TB)
─ Cat Scratch Disease
─ ─ Suppurative granulomas with necrotic background; can be paucicellular
Note
─ This pattern often reflects an underlying process causing cell death or fibrosis (e.g., treatment, necrosis, sclerosis)
─ A careful search for viable tumor cells or organisms in the necrotic debris is critical
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Tissue Fragment (Lymph Node Pattern 5)
Cytology
─ Smear is dominated by cohesive tissue fragments
─ Paucity of dispersed single cells
─ Background lymphoid tissue may be scant or absent
DDx
─ Metastatic Carcinoma
─ ─ Stereotypical lesion for this pattern (near-total replacement of the node)
─ Malignant Mesothelioma
─ ─ Cohesive fragments of malignant mesothelial cells, often with necrosis
─ Benign Nodal Inclusions
─ ─ Cohesive fragments of benign glandular or nevus cells without a significant lymphoid background
Note
─ This pattern strongly suggests near-complete replacement of the lymph node by a metastatic process
─ Distinguishing metastatic carcinoma from benign inclusions is the key diagnostic challenge
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Spindle Cell (Lymph Node Pattern 6)
Cytology
─ Variable cellularity
─ Predominantly composed of spindle-shaped cells
─ Cells can be single or in syncytial aggregates
DDx
─ Malignant
─ ─ Metastatic Sarcoma (e.g., Angiosarcoma, Synovial Sarcoma)
─ ─ ─ Malignant spindle cells with features of the primary sarcoma
─ ─ Follicular Dendritic Cell Sarcoma
─ ─ ─ Plump spindle cells in syncytial aggregates
─ ─ Metastatic Spindle Cell Melanoma / Carcinoma
─ ─ ─ Look for specific features (pigment, keratinization) and confirm with IHC
─ ─ Kaposi Sarcoma
─ ─ ─ Spindle cells in a lymphoid background
─ Benign / Reactive
─ ─ Sclerosing Granulomatous Disease (e.g., TB, Sarcoid)
─ ─ ─ Bland spindle cells (fibroblasts) admixed with epithelioid histiocytes
─ ─ Other Benign Spindle Cell Lesions
─ ─ ─ Includes myofibroblastoma, inflammatory pseudotumor, etc.
Note
─ This pattern has a broad differential, including reactive, benign, and malignant entities
─ IHC is essential to differentiate between mesenchymal, melanocytic, and epithelial origins
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Insufficient/Inadequate/Non-diagnostic (Lymph Node, Spleen, and Thymus WHO)
This category is for a specimen that, for qualitative or quantitative reasons, lacks sufficient material for a reliable diagnosis.
Criteria
─ The specimen is quantitatively insufficient due to low cellularity, containing only blood, or being acellular.
─ The specimen is qualitatively insufficient because cellular material is obscured by excessive blood or preparation artifacts (e.g., air-drying, poor fixation, contamination with ultrasound gel).
─ A specific number of lymphoid cells is not required for adequacy; any sample that demonstrates a pathological process consistent with the clinical and imaging findings is considered adequate.
─ If a sample from a clinically or radiologically suspicious lesion contains only benign lymphoid material, it may be categorized as non-diagnostic because it may not be representative. Alternatively, it can be called "Benign" with a clear statement that the findings may not correlate with the suspicious lesion. Institutions should be consistent in their approach.
Clinical
─ The risk of malignancy (ROM) for this category is highly variable, with studies reporting a wide range from 17% to 67% (pooled ROM ~34%). The high ROM is often because features leading to an inadequate sample (e.g., necrosis, hemorrhage) can be associated with malignancy.
─ By definition, if a specimen is truly unsuitable for interpretation, the ROM is undefined. These cases should never be reported as "Negative for malignancy".
─ Management requires correlation with clinical and imaging findings. If there is a high suspicion of malignancy, repeat sampling (e.g., FNAB with ROSE, core needle biopsy, or excisional biopsy) is recommended. If suspicion is low, clinical follow-up may be appropriate.
Note
─ Before a final "Non-diagnostic" categorization, all prepared material, including cell blocks or residual fluid, should be examined.
─ The presence of any atypical, suspicious, or malignant cells, regardless of how scant, precludes a non-diagnostic categorization.
─ The presence of non-lymphoid material like mucin or specific organisms in a necrotic background implies a pathological process and should be categorized accordingly, not as non-diagnostic.
─ The reason for the inadequacy should be documented in the report to guide future procedures. For example, a report of "Necrotic material only" is more informative than simply "Insufficient," as it raises suspicion for a neoplastic process.
─ Laboratories should audit their inadequacy rates as part of a quality management program.
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Benign (Lymph Node, Spleen, and Thymus WHO)
This category is for a specimen that demonstrates unequivocal benign cytopathological features. The findings may be diagnostic of a specific benign process (e.g., reactive hyperplasia, infection) or benign neoplasm.
Criteria
─ The sample contains features diagnostic of a specific benign entity or consists of a polymorphous lymphoid population consistent with a reactive process.
─ In reactive lymphoid hyperplasia, there is a mixed population of lymphocytes at various stages of maturation, including small lymphocytes, centrocytes, centroblasts, and immunoblasts. Tingible-body macrophages within germinal center fragments are often present.
─ Specific infectious or inflammatory patterns may be identified, such as:
─ Suppurative inflammation: A background of numerous neutrophils and necrotic debris, suggestive of an abscess.
─ Granulomatous inflammation: The presence of well-formed or poorly formed granulomas (collections of epithelioid histiocytes), with or without necrosis or giant cells.
─ Dermatopathic lymphadenopathy: A mixed lymphoid population with numerous melanin-laden histiocytes.
─ Viral-associated changes (e.g., infectious mononucleosis): A florid, mixed population of lymphoid cells including numerous, singly dispersed immunoblasts.
─ The absence of features suggestive of a lymphoproliferative disorder or metastatic malignancy.
Clinical
─ The risk of malignancy (ROM) for this category is low, generally reported between 2% and 16% (pooled ROM ~5%). False negatives are typically due to sampling error.
─ Management is generally conservative. If the benign diagnosis aligns with the clinical context, clinical follow-up is appropriate.
─ If the benign cytological findings conflict with suspicious clinical or imaging findings (e.g., a rapidly enlarging hard mass, B symptoms), further investigation such as repeat FNAB with flow cytometry, core needle biopsy, or excisional biopsy is recommended.
Note
─ The report should provide a specific diagnosis whenever possible (e.g., "Granulomatous inflammation consistent with sarcoid," "Reactive lymphoid hyperplasia").
─ A systematic, pattern-based approach is crucial for diagnosis, evaluating the background, predominant cell type, and overall heterogeneity of the population.
─ Ancillary tests are used selectively. Flow cytometry is valuable to exclude a low-grade lymphoma when a monotonous population of small lymphocytes is present. Special stains (e.g., Ziehl-Neelsen) and microbiological cultures are essential when an infectious etiology is suspected.
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Atypical (Lymph Node, Spleen, and Thymus WHO)
This category is for a specimen that demonstrates features predominantly seen in benign lesions but also has minimal features that raise the possibility of a malignant lesion, where the evidence is insufficient, either in quantity or quality, to make a definitive diagnosis.
Criteria
─ The category is used for cases with diagnostic uncertainty, most commonly when cytological features overlap between a florid reactive process and a low-grade lymphoproliferative disorder.
─ A common scenario is a highly cellular smear with a monotonous population of small lymphocytes or a follicular pattern with a relative lack of tingible-body macrophages, raising the differential of reactive hyperplasia versus follicular lymphoma or small lymphocytic lymphoma.
─ It can also be used for cases with a mixed population of lymphoid cells that includes scattered large, atypical cells, where a high-grade process like Hodgkin lymphoma cannot be excluded but definitive diagnostic cells are not identified.
─ The specimen may be technically limited (e.g., scant cellularity, poor preservation), but the presence of any atypical cells, no matter how few, moves the case from the "Insufficient" to the "Atypical" category.
─ The presence of unexpected cell types, such as scant keratinizing squamous cells where the differential is between a benign process (e.g., branchial cleft cyst) and a metastatic carcinoma.
Clinical
─ The risk of malignancy (ROM) is intermediate but significant, with studies reporting a wide range of 29% to 77% and a pooled ROM of approximately 65%.
─ Management requires close correlation with clinical and imaging findings. The first step is often a multidisciplinary discussion.
─ Further investigation is almost always required. This may include repeat FNAB (ideally with ROSE and triage for ancillary studies), core needle biopsy, or excisional biopsy, depending on the level of clinical suspicion and the differential diagnosis.
Note
─ This category should be used sparingly, and its use should be audited by the laboratory.
─ The report should clearly describe the atypical features and state the differential diagnosis.
─ Ancillary studies, particularly flow cytometry for lymphoid populations, are crucial. If ancillary tests resolve the diagnosis, the case should be re-categorized as "Benign" or "Malignant". The "Atypical" category is often a provisional diagnosis pending these results or is used when ancillary testing is not possible or inconclusive.
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Suspicious for Malignancy (Lymph Node, Spleen, and Thymus WHO)
This category is for a specimen that demonstrates cytopathological features suggestive of malignancy but with features insufficient, either in number or in quality, to make an unequivocal diagnosis. It is used when the cytopathologist is close to a definitive malignant diagnosis but is hesitant due to some degree of uncertainty.
Criteria
─ The cytomorphological features are highly suggestive but not diagnostic of malignancy. This can apply to both haematolymphoid and metastatic neoplasms.
─ The uncertainty is often due to a paucity of diagnostic cells (quantitative insufficiency) or suboptimal preservation.
─ Common scenarios include:
─ A monomorphic population of small or intermediate-sized lymphoid cells suspicious for a low-grade lymphoma, but definitive cytological features are subtle and flow cytometry is unavailable or inconclusive.
─ Occasional large, atypical cells in a mixed inflammatory background, raising the possibility of Hodgkin lymphoma, but definitive Reed-Sternberg cells are not identified or immunophenotyping is equivocal.
─ Scant atypical non-lymphoid cells suspicious for metastasis, but insufficient material for confirmatory ancillary studies like immunocytochemistry.
─ The clinical context is crucial; the same cytomorphology might be categorized as "Atypical" in a low-suspicion setting but "Suspicious" when clinical and imaging findings are highly concerning for malignancy.
Clinical
─ This category carries a very high risk of malignancy (ROM), with studies reporting a range of 88% to 100% and a pooled ROM of approximately 93%. The ROM is at the higher end of this range when ancillary tests like flow cytometry are utilized.
─ A "Suspicious" report necessitates further action to obtain a definitive diagnosis. Management options include repeat FNAB with triage for ancillary studies, core needle biopsy, or excisional biopsy, depending on the clinical scenario and suspected diagnosis.
Note
─ This category should be used sparingly to maintain the high positive predictive value of the "Malignant" category.
─ The report should always describe the features that are suspicious and, whenever possible, state the type of malignancy suspected or provide a differential diagnosis (e.g., "Suspicious for metastatic carcinoma," "Suspicious for lymphoma").
─ If ancillary testing clarifies the diagnosis, the case should be re-categorized into "Benign" or "Malignant" in an integrated final report.
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Malignant (Lymph Node, Spleen, and Thymus WHO)
This category is for a specimen that demonstrates unequivocal cytopathological features of malignancy.
Criteria
─ The cytomorphological features are diagnostic of a malignant neoplasm, which can be either a haematolymphoid malignancy or a metastatic disease.
─ For haematolymphoid neoplasms, features may include a monotonous population of lymphoid cells (small, intermediate, or large), often with nuclear atypia, and architectural disruption (e.g., loss of a polymorphous background). Diagnosis of aggressive lymphomas is often possible on morphology, while indolent lymphomas may have deceptively bland cells.
─ For metastatic disease, there is a population of non-lymphoid cells with malignant features, which may form cohesive clusters, glands, or be present as single cells.
─ The background may show features suggestive of malignancy, such as necrosis or apoptotic debris ("lymphoglandular bodies" in high-grade lymphomas).
Clinical
─ The risk of malignancy (ROM) for this category is extremely high, with studies reporting a range of 98% to 100% and a pooled ROM of 100%.
─ A definitive "Malignant" diagnosis is sufficient for clinical management, including staging and therapy.
─ While FNAB with ancillary studies is sufficient for diagnosing many lymphomas and most metastases, excisional biopsy may still be recommended for the initial classification of certain lymphomas (e.g., Hodgkin lymphoma, T-cell lymphomas) or for grading follicular lymphomas.
Note
─ A comprehensive report should describe the cytomorphological features, provide a specific diagnosis whenever possible (e.g., "Diffuse large B-cell lymphoma," "Metastatic adenocarcinoma"), and integrate all ancillary test results.
─ Ancillary studies are crucial. Flow cytometry is essential for definitively diagnosing and subtyping most B-cell lymphomas. Immunocytochemistry on cell blocks is vital for diagnosing Hodgkin lymphoma and for identifying the origin of metastatic tumors. Molecular studies (e.g., FISH, NGS) can provide further diagnostic and prognostic information.
─ Clinical correlation is fundamental. In some cases, such as a recurrent indolent lymphoma in a patient with a known history, a malignant diagnosis can be made on morphology alone. For a de novo diagnosis of lymphoma, ancillary confirmation is the standard of care.
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🧠Neuro
Perivascular Gradient Pattern (Neuro Pattern 1a)
Angiocentric and Diffuse Pattern (Neuro Pattern 1b)
Randomized Tissue Fragment With or Without Vascular Affinity Pattern (Neuro Pattern 1c)
Thin-Walled Blood Vessels Without Endothelial Cell Proliferation (Nonproliferative) (Neuro Pattern 2a)
Blood Vessels With Endothelial Cell Proliferation (Proliferative) (Neuro Pattern 2b)
Billiard Table/Feltlike or Granular Background (Neuro Pattern 3a)
Fibrillary or Threadlike Background (Neuro Pattern 3b)
Vascular Coronal Pattern (Neuro Pattern 4)
Randomized Loose Tissue Fragment and Dispersed Single Cell Pattern (Neuro Pattern 5)
Randomized Loose Tissue Fragment and Dispersed Small Cell Pattern (Neuro Pattern 6)
Syncytial Tissue Fragments With or Without Whorls (Neuro Pattern 7)
Anastomosing Blood Vessels Associated With Epithelioid Cells With Indistinct or Foamy Cytoplasm (Neuro Pattern 8)
"Old Fishnet/Twisted Rope" Pattern (Neuro Pattern 9)
🍤Pancreas
Inflammatory Cells Predominating With or Without Epithelial Tissue Fragments (Pancreas Pattern 1)
Cytology
— Mixed inflammatory infiltrate (neutrophils, lymphocytes, histiocytes, plasma cells)
— May be admixed with granulation tissue or fibrous stromal fragments
— Pancreatic epithelial cells (ductal, acinar) may be present or absent
DDx
— Acute Pancreatitis
— -Neutrophils and histiocytes with extensive fat necrosis and coagulative necrosis
— Chronic Pancreatitis
— -Paucicellular with lymphocytes/histiocytes, fibrous stromal fragments, and calcifications
— Autoimmune Pancreatitis
— -Cellular stromal fragments with a lymphoplasmacytic infiltrate and eosinophils
— Abscess
— -Predominantly neutrophils with degeneration
— Ectopic Spleen
— -Mixed lymphoplasmacytic infiltrate with sinusoidal vessels and capillaries of red/white pulp
— Lymphoma
— -Monomorphous population of atypical lymphoid cells
— Malignancy with Inflammation
— -Underlying carcinoma (e.g., Ductal, Medullary) can be obscured by inflammation
Note
— Inflammation can be secondary to an underlying neoplasm or cyst
— A thorough search for atypical epithelial cells is mandatory in a dense inflammatory background
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Mucinous Background (Pancreas Pattern 2)
Cytology
— Mucinous background
— Cellularity is variable (can be paucicellular to hypercellular)
— Mucin quality is variable: thin and watery to thick and viscous ("ferning")
— Background may contain histiocytes and degenerated "oncotic" cells
DDx
— Benign / Contaminant
— —GI Tract Contamination
— — -Thin, watery mucin with well-formed honeycomb sheets (gastric) or villiform fragments with goblet cells (duodenal)
— —Ciliated Foregut Cyst
— — -Viscous mucin with ciliated columnar cells and needle-like crystals
— —Squamoid Cyst of Pancreatic Ducts
— — -Thick mucin with both benign squamous and benign mucinous columnar cells
— Neoplastic / Malignant
— —IPMN / MCN
— — -Thick, viscous mucin ("ferning") with mucinous columnar cells showing variable dysplasia
— —Colloid (Mucinous Noncystic) Carcinoma
— — -Malignant ductal cells floating in abundant, thick background mucin
— —Signet Ring Cell Carcinoma
— — -Predominantly single, dispersed signet ring cells
Note
— Distinguishing GI contaminant from a true mucinous neoplasm is a key challenge
— Viscous fluid and high CEA levels are characteristic of mucinous neoplasms (MCN/IPMN)
— GNAS mutations are specific for IPMN (not seen in MCN)
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Dirty or Necrotic Background Predominating (Pancreas Pattern 3)
Cytology
— Predominantly dirty, granular, and/or necrotic background
— Fat necrosis may be present
— Often contains a mixed inflammatory infiltrate (neutrophils, histiocytes)
— Epithelial component, if present, may be scant and obscured by necrosis
DDx
— Benign
— —Acute Pancreatitis
— — -Mixed inflammation, fat necrosis, and degenerate cellular debris
— —Pseudocyst
— — -Hemosiderin-laden macrophages, bile pigment, and debris
— —Abscess
— — -Almost exclusively neutrophils with degeneration
— Malignant
— —High-Grade Ductal Adenocarcinoma
— — -Disorganized ductal groups with marked nuclear atypia; may be scant
— —Undifferentiated (Anaplastic) Carcinoma
— — -Bizarre, pleomorphic, and giant tumor cells; may show cytophagocytosis
— —Undifferentiated Carcinoma with Osteoclast-like Giant Cells
— — -Dual population of malignant mononuclear cells and benign osteoclast-like giant cells
— —Adenosquamous Carcinoma
— — -Shows both malignant glandular and squamous components; keratinous debris
— —Metastatic Carcinoma (e.g., Colorectal)
— — -"Dirty necrosis" with features of the primary tumor (e.g., columnar cells for colorectal)
Note
— Abundant inflammation or necrosis can obscure an underlying malignancy
— A thorough search for atypical epithelial cells is mandatory in a necrotic/inflammatory background
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Predominantly Cohesive Epithelial or Ductal-Type Tissue Fragments (Pancreas Pattern 4)
Cytology
— Predominantly cohesive, tight epithelial/ductal fragments
— Large, flat sheets with honeycomb or "picket fence" architecture
— Few dispersed single cells
— Background is typically clean
DDx
— Benign
— —Benign Ductal Cells (including Reactive Atypia)
— — -Flat honeycomb sheets with minimal atypia and low N:C ratio; may have infiltrating neutrophils
— —GI Contamination (Gastric/Duodenal)
— — -Look for specific cell types (foveolar, goblet) and architecture (villi)
— —Normal Pancreas
— — -Mix of both ductal sheets and "grapelike" acinar clusters
— Neoplastic (Benign/Precursor)
— —Pancreatic Intraepithelial Neoplasia (PanIN)
— — -Tightly cohesive groups with nuclear crowding, grooves, and pale chromatin (thyroid-like nuclei)
— —Serous Cystadenoma
— — -Scant, flat sheets of cuboidal cells with clear cytoplasm and uniform, round nuclei
— Malignant
— —Well-Differentiated Ductal Adenocarcinoma
— — -Stereotypical lesion for this pattern; disorganized "drunken honeycomb," nuclear irregularities, and anisonucleosis (>4:1)
— —Medullary Carcinoma
— — -Syncytial groups of cells with eosinophilic cytoplasm and prominent nucleoli; prominent lymphoid infiltrate
— —Pancreatoblastoma
— — -Primitive small blue cells with acinar, endocrine, and/or squamoid differentiation
— —Metastatic Adenocarcinoma
— — -Morphology "foreign" to pancreas; requires clinical history and IHC
Note
— The key diagnostic challenge is distinguishing reactive atypia from well-differentiated adenocarcinoma
— Architectural disorganization ("drunken honeycomb") and significant nuclear atypia favor adenocarcinoma
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Loosely Cohesive Tissue Fragments With Predominantly Dispersed Single Cells (Pancreas Pattern 5)
Cytology
— Predominantly dispersed single cells with some loosely cohesive groups
— Typically high cellularity
— Background is variable (clean, necrotic, or mucinous)
— Cell morphology is highly variable depending on the underlying entity
DDx
— Neuroendocrine Neoplasms
— —Pancreatic Neuroendocrine Tumor (PanNET)
— — -Monomorphic plasmacytoid cells, "salt-and-pepper" chromatin, +/- rosettes
— —Poorly Differentiated Neuroendocrine Carcinoma
— — -Small or large cell types with high N:C ratio, necrosis, crush, and high mitotic rate
— Acinar Neoplasms
— —Acinar Cell Carcinoma
— — -Organoid/acinar groups, granular cytoplasm, prominent single nucleoli
— Ductal and Related Neoplasms
— —Pancreatic Ductal Adenocarcinoma (High-Grade)
— — -Marked pleomorphism, irregular nuclei, "drunken honeycomb," necrotic background
— —Undifferentiated (Anaplastic) Carcinoma
— — -Bizarre, pleomorphic, and giant tumor cells; marked necrosis and inflammation
— —Signet Ring Cell Carcinoma
— — -Predominantly single signet ring cells
— —Oncocytic Carcinoma
— — -Cohesive groups and single cells with dense, granular oncocytic cytoplasm; prominent nucleoli
— Other Primaries
— —Pancreatoblastoma
— — -Primitive small blue cells with acinar, endocrine, and/or squamoid differentiation
— Metastatic Neoplasms
— —Metastatic Melanoma
— — -Pleomorphic cells, prominent macronucleoli, intranuclear pseudoinclusions, +/- pigment
— —Metastatic Renal Cell Carcinoma
— — -Clear cells on fibrovascular strands, prominent nucleoli
— —Other Metastases (e.g., Breast)
— — -Requires clinical history; morphology mimics primary site
— Benign / Contaminant
— —Benign Hepatocytes
— — -Polygonal cells with granular cytoplasm and prominent central nucleoli
Note
— Pattern has a very broad DDx, from benign contaminants to high-grade malignancies
— IHC is essential to differentiate between the many possibilities in this pattern
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Epithelial Proliferations With Fibrovascular Stroma or Cores Within Epithelial Tissue Fragments (Pancreas Pattern 6)
Cytology
— Epithelial groups arranged on fibrovascular cores
— Fibrovascular stroma is variable in quantity and size
— Epithelial component is variable (monomorphic, clear cell, granular, etc.)
DDx
— Solid Pseudopapillary Neoplasm (SPN)
— —Monomorphic cells with nuclear grooves on branching papillae with myxoid stroma
— —Pathognomonic myxoid globules
— Pancreatic Neuroendocrine Tumor (PanNET)
— —Monomorphic plasmacytoid cells loosely attached to capillaries; "salt-and-pepper" chromatin
— Acinar Cell Carcinoma
— —Acinar cells with granular cytoplasm and prominent nucleoli arranged on vessels
— Intraductal Papillary Mucinous Neoplasm (IPMN)
— —Mucinous columnar epithelium forming papillae
— Metastatic Renal Cell Carcinoma (RCC)
— —Clear cells with prominent nucleoli arranged on prominent vasculature
— Metastatic Hepatocellular Carcinoma (HCC)
— —Polygonal cells with granular eosinophilic cytoplasm on trabecular vessels
— Benign Hepatocytes (Contaminant)
— —Can be seen in reactive fragments with fibrovascular cores
Note
— This pattern has a broad DDx, often requiring IHC for definitive diagnosis
— Nuclear beta-catenin is diagnostic for SPN
— Key IHC: Neuroendocrine markers (PanNET), Trypsin/Bcl-10 (ACC), PAX8/CD10 (RCC), HepPar1 (HCC)
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Squamous Cells Predominating (Pancreas Pattern 7)
Cytology
— Predominantly squamous cells
— Can show a spectrum from benign anucleated squames to malignant keratinizing cells
— Background is variable: can be clean, inflammatory, keratinous, or mucinous
DDx
— Benign
— —Lymphoepithelial Cyst (LECP)
— — -Abundant anucleated squames, keratinous debris, lymphocytes, and cholesterol crystals
— —Squamoid Cyst of Pancreatic Ducts (SCOPD)
— — -Biphasic population of benign squamous and mucinous columnar cells
— —Dermoid Cyst
— — -Similar to LECP; may have adnexal structures (if sampled)
— Malignant
— —Adenosquamous Carcinoma
— — -Dual population of malignant glandular and malignant squamous cells
— —Metastatic Squamous Cell Carcinoma
— — -Malignant squamous cells only; requires clinical history to exclude primary
— —Pancreatoblastoma
— — -Primitive small blue cells with characteristic squamoid corpuscles
Note
— Benign squamous cysts (LECP, SCOPD) can have high CEA levels, mimicking a mucinous neoplasm
— The key to diagnosis is assessing the nuclear features of the squamous cells (benign vs. malignant)
— IHC (p40, CK5/6) can confirm a squamous component
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Stromal Fragments With or Without Epithelial Tissue Fragments (Pancreas Pattern 8)
Cytology
— Stromal fragments with or without an epithelial component
— Cellularity is variable
— Stroma can be fibrous or myxoid; epithelial component is variable (ductal, acinar, squamoid)
DDx
— Benign
— —Chronic Pancreatitis
— — -Paucicellular with fibrous (not cellular) stromal fragments and mixed inflammation
— —Acute Pancreatitis
— — -Dirty, necrotic background with fat necrosis and acute inflammation
— Malignant
— —Pancreatoblastoma
— — -Cellular smears with epithelial and mesenchymal components; squamoid corpuscles are characteristic
— —Mesenchymal Neoplasm (e.g., GIST)
— — -Spindle cell proliferation; diagnosis confirmed with IHC
Note
— Chronic pancreatitis typically has fibrous, acellular stroma
— Squamoid corpuscles are a key feature differentiating pancreatoblastoma from other entities
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Non-Diagnostic (Pancreas WHO)
This category is used for specimens that are unsatisfactory for evaluation. This may be due to an insufficient quantity of well-preserved epithelial cells, the presence of obscuring elements, or other qualitative limitations.
Criteria
─ Insufficient number of interpretable pancreaticobiliary epithelial cells. For solid lesions, some guidelines suggest at least a few clusters of well-visualized epithelial cells are needed.
─ Acellular specimen, or a sample containing only blood, acellular mucin, or clear cyst fluid without an epithelial component.
─ Presence of only gastrointestinal contaminants (e.g., gastric or duodenal mucosa) without accompanying pancreatic elements.
─ Specimen is markedly obscured by excessive blood, thick mucus, extensive inflammation, or widespread necrosis, preventing adequate evaluation of epithelial cells.
─ Significant preparation artifacts (e.g., extensive air-drying, crush artifact, poor fixation or staining) that preclude interpretation.
─ For a targeted solid mass, the presence of only normal pancreatic elements (acinar and ductal cells) is considered non-diagnostic as it likely represents a sampling miss.
Clinical
─ This category carries a risk of malignancy (ROM) that can range from approximately 5% to over 25%. A non-diagnostic result does not exclude malignancy.
─ Management typically involves repeat sampling, preferably with EUS-FNA and the use of rapid on-site evaluation (ROSE) to ensure adequacy.
Note
─ The presence of any atypical cells, regardless of how few, generally precludes a non-diagnostic interpretation; such cases are classified as "Atypical" or higher.
─ The reason for the non-diagnostic interpretation (e.g., scant cellularity, obscuring blood) should be stated in the report to guide subsequent procedures.
─ Correlation with clinical and imaging findings is essential. For example, a specimen with only inflammatory cells and debris might be considered diagnostic of an abscess if that is the clinical and radiological impression, but non-diagnostic if a solid mass was targeted.
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Benign / Negative (for Malignancy) (Pancreas WHO)
This category is for specimens with adequate cellularity and unequivocally benign cytological features. The findings may be diagnostic of a specific benign entity or may represent normal tissue.
Criteria
─ Presence of well-preserved, benign pancreaticobiliary elements, including ductal cells, acinar cells, and potentially islet cells.
─ Ductal cells typically form cohesive, flat, honeycomb-like sheets with round to oval, uniformly spaced nuclei, fine chromatin, and inconspicuous nucleoli.
─ Acinar cells are often in grape-like clusters, with abundant granular cytoplasm and round, eccentric nuclei.
─ For cystic lesions, specific benign findings may be present, such as the glycogen-rich cuboidal cells of a serous cystadenoma, or histiocytes and inflammatory debris consistent with a pseudocyst in the proper clinical context.
─ The background may be clean or contain evidence of inflammation (neutrophils, lymphocytes, histiocytes), fat necrosis, or calcific debris, as seen in chronic pancreatitis.
Clinical
─ The risk of malignancy (ROM) in this category is low, generally reported as 0-10%, with false negatives usually attributed to sampling error.
─ Management typically involves clinical and radiological follow-up. However, if the benign finding does not explain a suspicious mass lesion on imaging, repeat sampling should be considered.
Note
─ A specific benign diagnosis should be provided whenever possible (e.g., chronic pancreatitis, lymphoepithelial cyst, serous cystadenoma).
─ The presence of normal pancreatic elements alone in a sample from a targeted solid mass may be considered non-diagnostic, as it could represent a sampling miss. The report should clarify this discrepancy.
─ Significant cytologic atypia, features suspicious for malignancy, or evidence of a high-grade neoplasm are absent.
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Atypical (Pancreas WHO)
This category is for specimens with cytologic atypia that exceeds definite reactive changes but falls short of being suspicious for malignancy. The findings are quantitatively or qualitatively insufficient for a more definitive diagnosis.
Criteria
─ Presence of epithelial cells (usually ductal) with features that are concerning but not diagnostic of a neoplasm.
─ Architectural atypia may be present, such as minor crowding, some loss of the classic honeycomb sheet arrangement, and slight nuclear overlapping.
─ Nuclear atypia is mild to moderate and may include nuclear enlargement (e.g., 2–3 times the size of a red blood cell), some variation in nuclear size and shape (anisonucleosis), and minor nuclear membrane irregularities.
─ Chromatin may be finely granular but is not coarsely clumped or cleared. Nucleoli, if present, are generally small and not prominent.
─ This category is often used when there is an overlap between significant reactive/reparative changes (e.g., due to pancreatitis or an indwelling stent) and a low-grade neoplasm (like PanIN or well-differentiated adenocarcinoma).
Clinical
─ The risk of malignancy (ROM) for this category is intermediate, often reported in the range of 35–60%. It signifies a substantial risk that requires further action.
─ Management typically involves close clinical and radiological correlation. Repeat FNA, often with core biopsy, or close imaging surveillance is usually recommended.
Note
─ The "Atypical" category should be used sparingly to maintain its clinical utility.
─ The report should describe the atypical features and, if possible, suggest a differential diagnosis (e.g., "atypia favored to be reactive" vs. "atypia cannot rule out a low-grade neoplasm").
─ This category acts as a crucial intermediate step between "Benign" and "Neoplastic/Suspicious," acknowledging diagnostic uncertainty while highlighting the need for further investigation.
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Suspicious for Malignancy (Pancreas WHO)
A specimen that contains cells with cytological features highly worrisome for, but not diagnostic of, malignancy. This category is used when the evidence is qualitatively or quantitatively insufficient for an unequivocal diagnosis.
Criteria
─ The specimen contains a limited number of cells exhibiting high-grade cytological features, or the features are partially obscured.
─ Architectural features may include disorganized three-dimensional clusters, loss of polarity, and single atypical cells.
─ Nuclear features are highly abnormal and may include significant nuclear enlargement (often >4 times the size of a red blood cell), marked pleomorphism, irregular nuclear contours, and coarsely clumped or cleared chromatin.
─ Nucleoli are often prominent and irregular.
─ These features are strongly suggestive of malignancy but fall short of a definitive diagnosis due to low cellularity or other technical limitations.
Clinical
─ This interpretation carries a very high risk of malignancy (ROM), often reported as >80-90%, most commonly for pancreatic ductal adenocarcinoma (PDAC).
─ Clinical and imaging correlation is crucial. Further investigation, such as repeat FNA with core biopsy, or surgical exploration based on multidisciplinary discussion, is nearly always warranted.
Note
─ This category should be used sparingly to maintain a high positive predictive value for a "Malignant" diagnosis.
─ A common reason for this interpretation is scant sampling of a malignancy, especially a well-differentiated one.
─ While severe reactive changes (e.g., from stents or pancreatitis) can mimic malignancy, the "Suspicious" category is reserved for cases where the features strongly favor a neoplastic process over a reactive one, even if definitive criteria are not met.
─ The report should ideally state what malignancy is suspected (e.g., "Suspicious for adenocarcinoma").
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Malignant (Pancreas WHO)
This category is for specimens with unequivocal cytological features of malignancy. A specific tumor type should be provided whenever possible.
Criteria (General, for Pancreatic Ductal Adenocarcinoma) ─
─ Architectural disarray, including loss of the normal honeycomb structure, disorganized three-dimensional clusters, and single malignant cells.
─ Marked nuclear abnormalities, including a high nuclear-to-cytoplasmic (N:C) ratio, significant variation in nuclear size and shape (pleomorphism), and irregular nuclear contours with notches and indentations.
─ Coarsely clumped or cleared ("powdery") chromatin.
─ Prominent, irregular nucleoli or macronucleoli.
─ A necrotic or inflammatory background (tumor diathesis) is often present.
─ Mitotic figures, including atypical forms, may be seen.
Clinical
─ This diagnosis carries a very high risk of malignancy (ROM), approaching 100%.
─ A definitive "Malignant" diagnosis, especially when correlated with clinical and imaging findings, is sufficient for planning definitive management, such as surgery or neoadjuvant therapy.
Note
─ This category is used only when there is sufficient qualitative and quantitative evidence for a definitive diagnosis.
─ An effort should always be made to classify the malignancy (e.g., ductal adenocarcinoma, acinar cell carcinoma, neuroendocrine carcinoma, lymphoma, metastasis).
─ Ancillary studies, such as immunohistochemistry on a cell block, are often crucial for accurate classification and to guide therapy. Material should be preserved for potential molecular testing.
─ The report should clearly state the diagnosis of malignancy and the specific tumor type.
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Normal Pancreatic Acinar Cells
Cells derived from the exocrine acini of the pancreas.
Cells
─ Cellularity often high, few single cells
─ Cohesive, grape-like (acinar) clusters, often attached to fibrovascular stroma
Cytoplasm
─ Abundant, granular (zymogen granules), often bichromatic (basophilic at base, eosinophilic at apex)
─ Cell borders indistinct within clusters
Nuclei
─ Round to oval, typically eccentric
─ Finely granular, evenly distributed chromatin
─ Single, small, but often distinct/prominent nucleolus (can be larger if reactive)
─ Some naked nuclei may be present
Absent
─ Significant pleomorphism, hyperchromasia, or nuclear membrane irregularity
─ Mucinous features
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Normal Pancreatic Ductal Cells
Cells lining the pancreatic ductal system.
Cells
─ Cohesive flat sheets, often in a honeycomb arrangement
─ May form small tubules or clusters
Cytoplasm
─ Scant to moderate, pale, non-mucinous, or finely vacuolated
─ Well-defined cell borders
Nuclei
─ Round to oval, relatively uniform in size and shape, evenly spaced
─ Finely granular, evenly distributed chromatin
─ Inconspicuous nucleoli
─ Smooth nuclear membranes
Absent
─ Significant crowding, stratification, or loss of polarity (unless reactive)
─ Prominent atypia
Note
─ Unlike larger mesothelial cells, typically lack prominent intercellular "windows"
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Duodenal Epithelium (Contaminant)
Epithelial cells from the duodenum, a common contaminant in EUS-FNA of the pancreatic head.
Cells
─ Cohesive flat sheets (honeycomb) or papillary-like groups (representing villi)
─ Biphasic population: enterocytes and goblet cells
Cytoplasm
─ Enterocytes: columnar, non-mucinous, with an apical brush border (cilia-like, but shorter, denser)
─ Goblet cells: distended with mucin, "fried egg" appearance in sheets, nucleus pushed to base
Nuclei
─ Enterocytes: oval, basally located, uniform
─ Goblet cells: small, compressed, basal
─ Intraepithelial lymphocytes ("sesame seeds") often scattered within the epithelium
Background
─ May see detached brush borders, mucin
Absent
─ True pancreatic acinar or islet cells (unless mixed sample)
Note
─ Presence of brush border and goblet cells are key diagnostic features
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Gastric Epithelium (Contaminant)
Epithelial cells from the stomach, a common contaminant in EUS-FNA.
Cells
─ Small sheets, strips, or isolated cells; may see intact gastric pits/crypts
─ Predominantly foveolar (surface mucous) cells; chief and parietal cells less common on FNA
Cytoplasm
─ Foveolar cells: columnar, with distinct apical mucin caps (neutral mucin)
─ Chief cells (if present): granular, basophilic
─ Parietal cells (if present): larger, eosinophilic, often fried-egg appearance
Nuclei
─ Foveolar cells: small, round to oval, basal, often bland; may see nuclear grooves in naked foveolar nuclei
─ Chief/Parietal cells: round, central
Absent
─ Brush border, goblet cells (helps distinguish from duodenal)
─ True pancreatic acinar or islet cells (unless mixed sample)
Note
─ Apical mucin caps are characteristic of foveolar cells
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Mesothelium (Contaminant/Rare Primary)
Cells lining serosal surfaces, may be sampled if the lesion abuts the peritoneum or during transephrenic approaches.
Cells
─ Flat sheets, clusters, or single cells
─ Characteristic intercellular "windows" or clefts between cells in sheets
Cytoplasm
─ Moderate amount, dense or somewhat pale, may be "two-toned"
─ Well-defined cell borders
Nuclei
─ Round to oval, often centrally located
─ Smooth nuclear contours
─ Finely granular chromatin
─ Nucleoli can be small to prominent, especially if reactive
─ Binucleation or multinucleation can be seen, especially in reactive states
Absent
─ True glandular formation, mucin production (vacuoles can be present)
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Hepatocytes (Contaminant)
Liver cells, may be sampled if the lesion is near or involves the liver, or during transhepatic FNA.
Cells
─ Large, polygonal cells; may be in small groups, trabeculae, or single
Cytoplasm
─ Abundant, granular, eosinophilic
─ May contain lipofuscin (brown pigment) or bile pigment
Nuclei
─ Round to oval, often centrally located
─ Prominent, single, centrally located nucleolus is characteristic
─ Binucleation common
─ Chromatin can be vesicular
Absent
─ Ductal structures with honeycomb pattern (unless bile ductules are sampled)
─ Acinar formations
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Acute Pancreatitis
Acute inflammatory condition, often associated with gallstones or alcohol abuse.
Cells
─ Mostly neutrophils
─ Scant reactive/reparative ductal cells may be present
─ Foamy histiocytes
─ Fat necrosis (ghost-like outlines of adipocytes, saponification)
Cytoplasm
─ Ductal cells (if present): May show reactive changes, vacuolization
Nuclei
─ Ductal cell nuclei (if present): May be enlarged, have irregular nuclear membranes, and conspicuous nucleoli (reactive atypia)
Background
─ "Dirty" background with abundant inflammatory debris, necrotic material
─ Fibrin strands
─ Hemorrhage
─ Calcifications may be present, especially in necrotizing pancreatitis
Absent
─ Significant number of lymphocytes or plasma cells (unless evolving to chronic)
─ Granulomas (unless specific etiology like TB)
─ Malignant cells
Note
─ Cytologic findings reflect the acute inflammatory process and tissue damage
─ Reactive atypia in ductal cells should not be overinterpreted as malignancy in this context
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Chronic Pancreatitis
Progressive inflammatory condition leading to irreversible pancreatic damage, fibrosis, and loss of exocrine/endocrine function.
Cells
─ Often a hypocellular smear
─ Atrophic acinar cells (may be sparse or absent)
─ Ductal epithelial cells, often showing reactive atypia
─ Fibroblasts and myofibroblasts (spindle cells), may be in cellular stromal fragments
─ Chronic inflammatory cells: Lymphocytes, plasma cells, histiocytes
─ +/- Islet cells (may appear relatively prominent due to acinar atrophy)
Cytoplasm
─ Ductal cells: May show reactive changes, vacuolization, squamous metaplasia
─ Acinar cells (if present): Often atrophic, cytoplasm may be pale or vacuolated
Nuclei
─ Ductal cells: May be enlarged, show variable size, irregular contours, and prominent nucleoli (reactive atypia)
─ Acinar cells (if present): May be small and pyknotic, or show reactive enlargement
─ Fibroblasts/Myofibroblasts: Elongated, bland nuclei
Background
─ Fibrous stromal fragments, sometimes cellular
─ Calcifications (may be grossly gritty during FNA)
─ Fat necrosis
─ Inspissated proteinaceous material (protein plugs in ducts)
Absent
─ Unequivocal features of malignancy (though reactive atypia can be a significant pitfall)
─ Abundant neutrophils (unless there is an acute exacerbation)
Note
─ Reactive atypia in ductal cells can be marked and mimic adenocarcinoma
─ Cellular stromal fragments with spindle cells may mimic a mesenchymal neoplasm but typically lack significant atypia or mitoses
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Autoimmune and IgG4-related Pancreatitis
An inflammatory condition of the pancreas, often part of systemic IgG4-related disease, characterized by a dense lymphoplasmacytic infiltrate and often storiform fibrosis.
Clinical
─ May present as a discrete pancreatic mass (mimicking carcinoma) or diffuse pancreatic enlargement
─ Can cause obstructive jaundice
─ Often associated with elevated serum IgG4 levels
─ May involve other organs (e.g., bile ducts, salivary glands, kidneys, retroperitoneum)
─ Typically responds well to steroid therapy
Cells
─ Often hypocellular on FNA
─ Lymphocytes and plasma cells, sometimes numerous and forming aggregates
─ +/- Eosinophils
─ Ductal cells, may show reactive atypia
─ Acinar cells, often atrophic or absent
─ Spindle cells (fibroblasts from stroma)
Cytoplasm
─ Ductal cells: May show reactive changes
─ Plasma cells: Typically show eccentric nuclei, basophilic cytoplasm, and a perinuclear hof
Nuclei
─ Ductal cells: May show reactive atypia (enlargement, prominent nucleoli)
─ Lymphocytes: Mostly small, round, with dark, condensed chromatin
─ Plasma cells: Eccentric, with characteristic clock-face chromatin
─ Fibroblasts: Bland, elongated
Background
─ Cellular stromal fragments composed of fibroblasts, lymphocytes, and plasma cells
─ Storiform fibrosis (a swirling, "cartwheel" pattern of fibrosis) is a key histologic feature but often not apparent on FNA
─ +/- Obliterative phlebitis (inflammation and fibrosis of veins) is another histologic feature rarely seen on FNA
Absent
─ Unequivocal features of malignancy
─ Granulomas
─ Abundant neutrophils (unless there is a secondary acute pancreatitis component)
Ancillary studies
─ Serum IgG4 levels are often elevated (but can be normal)
─ IgG4 immunostaining (on cell block or biopsy, if sufficient material) can show an increased number of IgG4-positive plasma cells (e.g., >10/HPF or IgG4/IgG ratio >40% are common thresholds, but vary); sensitivity on FNA material is limited
DDx
─ Pancreatic ductal adenocarcinoma (especially when reactive ductal atypia is prominent)
─ Other forms of chronic pancreatitis (the lymphoplasmacytic infiltrate can be nonspecific)
─ Lymphoma (especially if the lymphoid infiltrate is very dense and appears monotonous)
Note
─ FNA findings are often nonspecific, resembling chronic pancreatitis with a prominent lymphoplasmacytic component
─ Diagnosis usually relies on a combination of clinical presentation, serologic findings (IgG4 levels), imaging characteristics, cytologic/histologic features, and response to steroid therapy
─ Key histologic features like storiform fibrosis and obliterative phlebitis are difficult to assess reliably on FNA alone
─ Reactive ductal atypia can be a significant diagnostic pitfall for adenocarcinoma
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Lymphoepithelial Cyst (Pancreas)
Benign cyst, unilocular or multilocular; squamous lining plus lymphoid tissue in the cyst wall.
Clinical
─ Can occur in peripancreatic lymph nodes or intrapancreatic
─ May be associated with HIV infection or other causes of lymphoid proliferation
Cells
─ Mature squamous cells, often anucleated (squames) or with small pyknotic nuclei
─ Lymphocytes (small, mature, in aggregates or germinal centers)
─ Histiocytes, including multinucleated forms
Background
─ Proteinaceous fluid, often thick
─ Abundant keratinous debris
─ +/- Cholesterol crystals
Absent
─ Significant atypia
─ Mucin-producing cells
─ Features of malignancy
Ancillary studies
─ Cyst fluid CEA very low (unlike mucinous cysts)
Note
─ Cytologic diagnosis is usually straightforward with the characteristic triad of squamous cells, lymphocytes, and keratin debris
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Pseudocyst (Pancreas)
A localized collection of fluid, rich in pancreatic enzymes, lacks true epithelial lining; arises after acute pancreatitis, trauma, or in setting of chronic pancreatitis.
Clinical
─ Most common cystic lesion of pancreas
Cells
─ Predominantly inflammatory cells: Neutrophils (especially if acute/infected), lymphocytes, histiocytes (often numerous and foamy)
─ Epithelial cells absent
Background
─ "Dirty" proteinaceous debris; necrotic material
Absent
─ True epithelial lining (by definition); malignant cells
─ Thick, viscous mucin (characteristic of mucinous neoplasm)
Ancillary studies
─ Cyst fluid amylase high ( >1000 U/L) and CEA low (<192 ng/mL, often <5 ng/mL)
DDx
─ Mucinous cyst (mucin in the background)
─ Serous cystadenoma (clear fluid and bland cuboidal cells)
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Splenule (Accessory Spleen)
Ectopic splenic tissue; an incidental finding; mimics pancreatic neoplasm on imaging.
Cells
─ Polymorphous lymphoid cells, endothelial cells (lining sinusoids), histiocytes/macrophages
Background
─ Bloody with lymphoglandular bodies (cytoplasmic fragments of lymphocytes)
Ancillary studies
─ IHC: CD8 highlights sinusoidal lining cells; CD20/CD3 for B/T lymphocytes; CD68 for histiocytes
Note
─ Key is recognizing the mixed lymphoid population and characteristic vascular structures (sinusoids) if visible
─ Can be confused with intrapancreatic lymph node or lymphoma
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Serous Cystadenoma (Pancreas)
Benign cystic neoplasm of small, uniform, glycogen-rich cuboidal cells forming microcysts.
Clinical
─ More common in women, body or tail of pancreas
─ Microcystic variant has "spongy" appearance on imaging; central stellate scar is classic
Cells
─ Often hypocellular or acellular (cyst fluid aspirate)
─ If cellular: Bland, cuboidal epithelial cells arranged in flat sheets or loose clusters
Cytoplasm
─ Scant to moderate, clear, pale, or finely vacuolated/granular (due to glycogen)
Nuclei
─ Small, round to oval, centrally or eccentrically located, monomorphic
─ Smooth nuclear contours, even chromatin, nucleoli inconspicuous, minimal to no atypia
Background
─ Colloid-like material (proteinaceous) may be present, not prominent or thick like mucin
─ Hemosiderin-laden macrophages
Absent
─ Significant atypia, pleomorphism, or mitotic activity
─ Thick, viscous mucin (distinguishes from mucinous cysts)
─ Lymphoid component (distinguishes from lymphoepithelial cyst)
─ Squamous cells or keratin debris
Ancillary studies
─ Cyst fluid: Low CEA (<5 ng/mL) & low amylase (variable)
─ PAS-D will show cytoplasmic glycogen (PAS positive, diastase sensitive)
─ IHC: (+) inhibin & GLUT-1 (membranous); (-) CEA, MUC1, MUC5AC
─ Molecular: VHL mutations
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Lymphangioma (Pancreas)
A benign congenital malformation of lymphatic channels, rare in the pancreas.
Clinical
─ More common in females, wide age range; often distal pancreas
─ Imaging: Well-circumscribed, thin-walled, uni- or multilocular cystic lesion
Cells
─ Often hypocellular
─ Predominantly small, mature lymphocytes
─ +/- Endothelial cells (flat, bland, lining lymphatic spaces – often difficult to identify)
─ +/- Histiocytes
Cytoplasm
─ Lymphocytes: Scant
─ Endothelial cells: Attenuated, difficult to see
Nuclei
─ Lymphocytes: Small, round, dark, mature-appearing
─ Endothelial cells: Flat, elongated, bland
Background
─ Clear, watery, chylous (milky), or serosanguinous fluid (proteinaceous)
─ +/- Fat globules
─ +/- Cholesterol crystals
Absent
─ Significant epithelial component (unless contaminant)
─ Atypia in lymphoid or endothelial cells
─ Mucin
─ Features of malignancy
Ancillary studies
─ Cyst fluid: Typically low CEA and low amylase; triglycerides may be elevated if chylous
─ IHC: Endothelial cells (+) D2-40, CD31, CD34
Note
─ MRI can be useful to exclude ductal communication (seen in some other cystic lesions)
─ Cytologic diagnosis can be challenging due to paucicellularity; main finding is often proteinaceous fluid with lymphocytes
─ DDx includes other paucicellular cysts like simple cysts, pseudocysts (if inflammation is scant), or cystic degeneration in other neoplasms. Lymphoid component can mimic lymphoepithelial cyst, but lymphangiomas lack squamous cells and keratin.
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Pancreaticobiliary Neoplasm (Low-Grade and High-Grade)
Per Papanicolaou Society encompasses neoplasms with features of ductal or biliary differentiation that are cytologically low-grade or high-grade but lack definitive features of invasion on FNA; includes precursor lesions (PanIN & BilIN) as well as some intraductal and cystic neoplasms
Note
─ This is a broad cytologic category, specific entities within it (like IPMN, MCN) have distinct clinicopathologic features and are detailed below; The distinction between low-grade and high-grade is based on the degree of cytologic and architectural atypia
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Pancreatic Intraepithelial Neoplasia (PanIN)
A microscopic, flat or micropapillary, non-invasive epithelial proliferation confined to pancreatic ducts; Graded low-grade (PanIN-1A, -1B, -2) to high-grade (PanIN-3)
Clinical
─ Incidental finding in resected specimens
Cells
─ Rarely specifically identified on FNA unless high-grade and exfoliating
─ Low-Grade PanIN: Small, crowded groups of ductal cells; columnar or cuboidal; minimal atypia
─ High-Grade PanIN: Crowded, disorganized groups; increased nuclear atypia, pleomorphism, hyperchromasia, prominent nucleoli; loss of polarity; may show micropapillary tufts
Cytoplasm
─ Low-Grade PanIN: May be mucinous or non-mucinous
─ High-Grade PanIN: Often scant, N:C ratio increased
Nuclei
─ Low-Grade PanIN: Round to oval, uniform or mildly enlarged, smooth contours, inconspicuous nucleoli
─ High-Grade PanIN: Enlarged, pleomorphic, irregular contours, hyperchromatic, coarse chromatin, prominent nucleoli; mitoses may be seen
Background
─ Clean (unless associated with pancreatitis or obstruction)
Absent
─ Stromal invasion
─ Features of other specific neoplasms (e.g., abundant extracellular mucin of IPMN, ovarian stroma of MCN)
Ancillary studies
─ Not typically performed on FNA for PanIN specifically due to diagnostic difficulty
─ Molecular: KRAS mutations common and early; TP53, CDKN2A/p16, SMAD4 mutations accumulate with progression to high-grade PanIN and invasive cancer
DDx
─ Reactive ductal atypia
─ IPMN (especially main duct or branch duct with minimal cystic change)
─ Invasive ductal adenocarcinoma (high-grade PanIN can be difficult to distinguish from well-differentiated adenocarcinoma on cytology alone if invasion isn't seen)
Note
─ Cytologic diagnosis of PanIN, especially low-grade, is very challenging and often not possible on FNA
─ High-grade PanIN cells may be indistinguishable from invasive adenocarcinoma cells
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Biliary Intraepithelial Neoplasia (BilIN)
A preinvasive neoplastic lesion of the biliary tract epithelium, analogous to PanIN in the pancreas, considered a precursor to cholangiocarcinoma; Graded from low-grade (BilIN-1, -2) to high-grade (BilIN-3)
Clinical
─ Incidental microscopic finding
Cells
─ Rarely specifically identified on FNA unless high-grade and exfoliating
─ Cells would likely be categorized as "Atypical" or "Pancreaticobiliary Neoplasm"
─ Low-Grade BilIN: Crowded groups of biliary-type cells; columnar; minimal atypia
─ High-Grade BilIN: More disorganized, increased nuclear atypia, pleomorphism, hyperchromasia; loss of polarity
Cytoplasm
─ Low-Grade BilIN: May be scant or slightly mucinous
─ High-Grade BilIN: Scant, increased N:C ratio
Nuclei
─ Low-Grade BilIN: Mildly enlarged, slightly irregular, inconspicuous nucleoli
─ High-Grade BilIN: Enlarged, pleomorphic, hyperchromatic, prominent nucleoli
Absent
─ Stromal invasion
Note
─ Cytologic diagnosis is very challenging on FNA
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Pancreatic Intraductal Papillary Mucinous Neoplasm (IPMN)
Intraductal, grossly visible ( >1 cm) mucin-producing epithelial neoplasm arising in the main pancreatic duct or its branches, characterized by papillary proliferation of mucinous cells
Clinical
─ Symptoms depend on location and duct involvement
─ Main duct IPMN (MD-IPMN) and mixed-type have higher risk of malignancy than branch duct IPMN (BD-IPMN)
─ Sendai and Fukuoka guidelines are used for risk stratification and management
Cells
─ Variable cellularity
─ Cohesive groups, sheets, clusters, and true papillary fronds with fibrovascular cores
─ Columnar mucinous cells characteristic
─ Single cells may be present, esp in higher-grade lesions
Cytoplasm
─ Abundant, clear to pale, foamy or finely vacuolated (mucin-rich)
─ Apical mucin caps may be seen
─ Oncocytic, intestinal, or pancreatobiliary epithelial types can occur, influencing cytoplasmic appearance
Nuclei
─ Low-Grade (esp gastric-type): Round, basally located, uniform, smooth contours, inconspicuous nucleoli
─ High-Grade (intestinal, pancreatobiliary, or oncocytic): Enlarged, pleomorphic, irregular contours, hyperchromatic, coarse chromatin, prominent/irregular nucleoli, loss of polarity, stratification, mitoses
Background
─ Abundant, thick, viscous, colloid-like extracellular mucin is a hallmark feature ("string sign" on aspiration)
─ Inflammatory cells, histiocytes
Absent
─ Ovarian-type stroma (unlike MCN)
─ Stromal invasion (if present, categorized as IPMN with an associated invasive carcinoma)
Ancillary studies
─ Cyst fluid: CEA elevated (>192 ng/mL, often >800 ng/mL); Amylase variable (high if duct communication, low if obstructed)
─ Molecular: KRAS and GNAS mutations common; RNF43, TP53, SMAD4 mutations with progression
DDx
─ Mucinous Cystic Neoplasm (MCN): Lacks ductal communication, has ovarian-type stroma (not seen on FNA), almost exclusively in women
─ Pancreatic Ductal Adenocarcinoma (PDAC): More discohesion, single malignant cells, and infiltrative pattern
─ Chronic pancreatitis with mucinous metaplasia/hyperplasia: Less architectural complexity, less atypia, background of chronic pancreatitis
─ Simple mucinous cyst/retention cyst: Thin mucin, bland flat lining, low CEA
Note
─ Grading (low vs high) is crucial for management
─ Type of epithelium (gastric, intestinal, pancreatobiliary, oncocytic) influences morphology and risk
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Intraductal Papillary Neoplasm of the Bile Duct (IPNB)
Intraductal growth of biliary epithelium with papillary or villous architecture; a rare papillary neoplasm arising in the intrahepatic or extrahepatic bile ducts, considered a precursor to invasive cholangiocarcinoma
Clinical
─ Can cause biliary obstruction, cholangitis, or be an incidental finding
Cells
─ Similar to pancreatic IPMN but arising in bile ducts
─ Papillary clusters, sheets of columnar cells
─ Four epithelial subtypes described: Pancreatobiliary, intestinal, gastric, oncocytic
Cytoplasm
─ Variable depending on subtype; may be mucinous or eosinophilic (oncocytic)
Nuclei
─ Range from low-grade to high-grade atypia, similar to IPMN
Background
─ May see mucin (less consistently thick or abundant as in IPMN)
─ Inflammatory cells
Absent
─ Features of invasion into stroma (on cytology sample)
Note
─ Analogous to pancreatic IPMN
─ Cytologic features depend on the grade and histologic subtype
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Mucinous Cystic Neoplasm (MCN) (Pancreas)
Mucin-producing cystic epithelial neoplasm of the pancreas that does not connect with the pancreatic duct system and is characterized by an ovarian-type stroma beneath the epithelium
Clinical
─ Almost exclusively occurs in women in the body or tail; large, unilocular or multilocular cysts
Cells
─ Variable cellularity; paucicellular if only cyst fluid aspirated
─ Columnar mucinous epithelial cells in flat sheets, strips, clusters, or papillae
─ Ovarian-type stromal cells (spindle cells) are diagnostic but rarely sampled by FNA
Cytoplasm
─ Epithelial cells: Abundant, clear to pale, foamy or vacuolated (mucin-rich)
Nuclei
─ Epithelial cells: Range from bland (low-grade) to markedly atypical (high-grade)
─ Low-Grade: Small, round to oval, basally located, uniform, smooth contours
─ High-Grade: Enlarged, pleomorphic, irregular contours, hyperchromatic, prominent nucleoli, mitoses
Background
─ Thick, viscous, extracellular mucin
─ Inflammatory cells, histiocytes, debris
Absent
─ Communication with the pancreatic duct system
─ Stromal invasion (if present, categorized as MCN with an associated invasive carcinoma)
Ancillary studies
─ Cyst fluid analysis: CEA elevated (>192 ng/mL); Amylase low
─ Molecular: KRAS mutations; RNF43 mutations also seen; TP53 mutations with progression
DDx
─ Intraductal Papillary Mucinous Neoplasm (IPMN): Connects with duct system, lacks ovarian stroma
─ Pseudocyst: Inflammatory background, high amylase, low CEA, no true epithelial lining
─ Serous Cystadenoma: Clear fluid, glycogen-rich cells, low CEA, low amylase
─ Simple cyst/retention cyst: Thin mucin, bland flat lining, low CEA
Note
─ Presence of ovarian-type stroma is pathognomonic but rarely seen on FNA; Diagnosis often presumptive based on clinical (female, body/tail cyst), imaging, and cyst fluid (high CEA, low amylase) with mucinous epithelium
─ All MCNs are considered to have malignant potential and are usually recommended for resection
Intraductal Oncocytic Papillary Neoplasm (IOPN)
Intraductal papillary neoplasm with complex arborizing papillae lined by oncocytic cells with eosinophilic cytoplasm and prominent nucleoli, involves main pancreatic duct or major branch ducts
Cells
─ Hypercellular smears
─ Large, complex papillary fronds, often with delicate fibrovascular cores
─ Sheets and clusters of oncocytic cells
─ Cells are typically large, polygonal to columnar
Cytoplasm
─ Abundant, dense, granular, eosinophilic (oncocytic)
─ Intracytoplasmic lumina or vacuoles may be present
Nuclei
─ Round to oval, eccentrically placed, enlarged, with vesicular or finely granular chromatin
─ Prominent, centrally located, eosinophilic macronucleoli are characteristic
─ Mild to moderate anisonucleosis; high-grade atypia can be seen
Absent
─ Significant extracellular mucin
─ Ovarian-type stroma
Ancillary studies
─ Molecular: Rearrangement of PRKACA or PRKACB; KRAS & GNAS mutations absent
DDx
─ IPMN subtypes (gastric, intestinal, pancreatobiliary): Lack diffuse oncocytic change and prominent macronucleoli; often have more extracellular mucin
─ Solid-pseudopapillary neoplasm: Lacks true oncocytic features; characteristic nuclear grooves, fine chromatin, and β-catenin nuclear positivity
─ Acinar cell carcinoma: More discohesive, prominent acinar formations, different nuclear features (zymogen granules)
─ Pancreatic neuroendocrine tumor: Different chromatin (salt-and-pepper), less prominent nucleoli, positive neuroendocrine markers
─ Serous cystadenoma: If oncocytic change is focal in an SCA, but SCA lacks true papillae and has clear, glycogen-rich cells predominantly
Note
─ Cytologically appears high-grade, but behavior can be relatively indolent if non-invasive
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Intraductal Tubulopapillary Neoplasm (ITPN)
Intraductal neoplasm with tubular and tubulopapillary growth, cuboidal to columnar cells with minimal or no overt mucin production
Clinical
─ Rare, distinct from IPMN and MCN, can occur in main or branch ducts
─ May cause duct obstruction, pancreatitis, or be an incidental finding
Cells
─ Cellular smears
─ Cohesive, complex, 3D groups, back-to-back tubular structures or short/stubby papillae
─ Cells cuboidal to low columnar
Cytoplasm
─ Scant to moderate, eosinophilic or amphophilic, non-mucinous (or only focal apical mucin)
Nuclei
─ Round to oval, uniform, with smooth contours; chromatin granular to moderately coarse
─ Nucleoli usually conspicuous, no macronucleoli
─ High-grade atypia common
Background
─ Clean; some necrotic debris in higher-grade lesions
Absent
─ Abundant extracellular mucin (unlike IPMN)
─ Ovarian-type stroma (unlike MCN)
─ Prominent oncocytic features (unlike IOPN)
Ancillary studies
─ Molecular: KRAS, GNAS, and RNF43 mutations are absent
DDx
─ Pancreatic ductal adenocarcinoma (PDAC): ITPN is intraductal; PDAC is invasive with desmoplasia; ITPN cells often more uniform with less pleomorphism than typical PDAC, though high-grade ITPN can mimic PDAC
─ IPMN, particularly pancreatobiliary subtype: IPMN usually has more overt mucin production and often cystic change; ITPN is more solid/tubular
─ PanIN: PanIN is a microscopic flat lesion, ITPN is grossly visible and forms complex structures
Note
─ High-risk precursor lesion, frequently associated with high-grade dysplasia and invasive carcinoma
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Cholangiocarcinoma (Intrahepatic, Hilar, Extrahepatic)
Adenocarcinoma arising from biliary epithelium lining the intra or extrahepatic bile ducts
Clinical
─ Risk factors include primary sclerosing cholangitis, choledochal cysts, liver flukes (Clonorchis, Opisthorchis), hepatolithiasis, and chronic biliary inflammation
─ Intrahepatic cholangiocarcinoma may present as liver mass
─ Hilar (Klatskin tumor) and extrahepatic cholangiocarcinoma presents with obstructive jaundice
─ Serum CA 19-9 and CEA elevated
Cell patterns
─ Malignant glandular cells in sheets, clusters, acini, or papillae, often single cells; cuboidal to columnar, pleomorphic; moderate to high cellularity
Cytoplasm
─ Scant to moderate, basophilic, pale, or vacuolated (mucin-containing)
─ Signet-ring cells may be present
Nuclei
─ Enlarged, irregular contours, notching, and grooves
─ Hyperchromatic, coarse or clumped chromatin; parachromatin clearing may be seen
─ Nucleoli prominent and irregular; macronucleoli can be seen
─ Anisonucleosis and pleomorphism apparent
─ Mitotic figures may be present
Background
─ "Dirty" with necrotic debris and inflammation; bile pigment if obstructed; desmoplastic stromal fragments
Absent
─ Features specific to HCC (endothelial wrapping, tumor cell bile production, HepPar-1); features specific to other pancreatic neoplasms
Ancillary studies
─ IHC: (+) CK7, CK19, CEA, MUC1, MUC5AC; CK20 variable
─ IHC: (-) Hepatocellular markers (HepPar-1, Arginase-1, Glypican-3), neuroendocrine markers (synaptophysin, chromogranin), often TTF-1 (hilar cholangiocarcinomas can be (+) TTF-1)
─ SMAD4/DPC4 loss common, similar to PDAC
─ FISH for polysomy of chromosomes 3, 7, 17 and 9p21 (CDKN2A/p16) deletion can be helpful in biliary brushings, esp in PSC patients
DDx
─ Pancreatic ductal adenocarcinoma: Similar or identical; distinction based on location
─ Metastatic adenocarcinoma
─ Reactive biliary atypia: Can be very difficult, esp in the setting of stents or PSC; reactive cells usually show less architectural disarray, smoother nuclear contours, finer chromatin, and lack numerous atypical single cells
─ Hepatocellular carcinoma: esp poorly differentiated variants; HCC typically shows trabecular patterns, sinusoidal capillarization, and positive hepatocellular markers
Note
─ Cytologic diagnosis challenging, particularly in well-differentiated tumors or with reactive changes
─ Bile duct brushings high specificity but variable sensitivity; FNA higher sensitivity for mass lesions
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Solid Pseudopapillary Neoplasm (SPN)
A low-grade malignant epithelial neoplasm with solid and pseudopapillary architecture, composed of relatively uniform cells with round to oval nuclei, often with nuclear grooves, and eosinophilic or clear cytoplasm
Clinical
─ young women (mean age 20s-30s)
─ large, well-circumscribed, encapsulated mass, frequently in the tail
─ many are incidental findings
─ Excellent prognosis after complete surgical resection, even with invasion or metastases (primarily to liver or peritoneum)
Cell patterns
─ Highly cellular; monomorphic cells in branching papillary-like fronds with fibrovascular cores, solid sheets, loose clusters, or single; round to polygonal/plasmacytoid
Cytoplasm
─ Moderate, finely granular, eosinophilic, or clear/vacuolated
─ Cytoplasmic hyaline globules (PAS-D positive) may be present
─ Indistinct cell borders
Nuclei
─ Round to oval, eccentrically placed; Finely granular, "powdery" or "salt-and-pepper"
─ Longitudinal nuclear grooves characteristic
─ Nucleoli inconspicuous or small
─ Mitotic figures sparse
Background
─ Often hemorrhagic; myxoid or hyalinized material (stroma of fibrovascular stalks); cholesterol crystals, foamy macrophages, necrotic debris (esp if cystic degeneration)
Absent
─ Significant pleomorphism; overt glandular or acinar differentiation; abundant extracellular mucin
Ancillary studies
─ IHC: (+) β-catenin (nuclear and cytoplasmic), CD10 (membranous), CD56, vimentin, α1-antitrypsin, progesterone receptor
─ IHC: (-) Chromogranin (or only focal), trypsin, CK7 (usually)
─ Molecular: CTNNB1 (gene encoding β-catenin) mutations
DDx
─ Pancreatic neuroendocrine tumor (PanNET): Can have plasmacytoid cells and granular cytoplasm; PanNETs more salt-and-pepper chromatin, lack nuclear grooves, and (+) chromogranin/synaptophysin, (-) nuclear β-catenin
─ Acinar cell carcinoma: granular cytoplasm (zymogen granules), prominent nucleoli, (+) trypsin/BCL10
─ Pancreatoblastoma: Occurs in children, squamous morules, may show acinar or neuroendocrine differentiation
─ Serous cystadenoma: If SPN is predominantly cystic; serous cystadenoma has clear, glycogen-rich cells and lacks the nuclear features or IHC profile of SPN
Note
─ combination of delicate papillary fronds, monomorphic cells with nuclear grooves, and characteristic IHC (nuclear β-catenin) is diagnostic
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Pancreatoblastoma
rare malignant epithelial neoplasm of childhood, acinar differentiation and squamous morules
Clinical
─ Most common pancreatic neoplasm in children ( <10 years old); very rare in adults
─ associated with Beckwith-Wiedemann syndrome or familial adenomatous polyposis (FAP)
─ presents as a large abdominal mass; serum AFP may be elevated
Cell patterns
─ Highly cellular; dual population (primitive cells in clusters/sheets/rosettes; larger cells with acinar differentiation); characteristic squamous morules
Cytoplasm
─ Primitive cells: Scant, basophilic
─ Acinar cells: Moderate, granular (zymogen granules), eosinophilic or basophilic
─ Squamous cells: Dense, eosinophilic/orangeophilic
Nuclei
─ Primitive cells: Round to oval, hyperchromatic, coarse chromatin, inconspicuous nucleoli
─ Acinar cells: Round, eccentric, vesicular chromatin, prominent nucleolus
─ Squamous cells: Bland, often pyknotic
Background
─ May be clean or contain blood, necrotic debris
Absent
─ Significant extracellular mucin; ovarian-type stroma; prominent neuroendocrine features (focal neuroendocrine differentiation can occur)
Ancillary studies
─ IHC: (+) Trypsin, chymotrypsin, BCL10 (acinar component); Keratins (squamoid corpuscles); β-catenin (nuclear, often)
─ IHC: (+) Synaptophysin, chromogranin (focally in some cases)
─ AFP can be positive
DDx
─ Pancreatic neuroendocrine tumor (PanNET): Lacks squamoid corpuscles and true acinar differentiation; diffusely (+) neuroendocrine markers
─ Acinar cell carcinoma: Predominantly acinar differentiation, lacks squamoid corpuscles and primitive component ( some overlap exists, esp in adults)
─ Solid pseudopapillary neoplasm (SPN): Lacks squamoid corpuscles and acinar differentiation; characteristic nuclear grooves and nuclear β-catenin
─ Hepatoblastoma (metastatic): Can have squamoid morules and AFP production; clinical context and liver imaging important
Note
─ Squamoid corpuscles are the most distinctive cytologic feature
─ Prognosis better in children than in rare adult cases
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Pancreatic Ductal Adenocarcinoma (PDAC)
An invasive malignant epithelial neoplasm showing glandular (ductal) differentiation, accounts for majority of pancreatic cancers
Clinical
─ older adults ( 60s-70s), presents late with painless jaundice (head lesions), abdominal/back pain, weight loss, anorexia
─ Most common in head of pancreas
─ Serum CA 19-9 often elevated but not specific
─ Poor prognosis, high rate of local invasion and distant metastases
Cell patterns
─ Variable cellularity; malignant ductal cells in disorganized crowded 3D clusters, poorly formed glands, sheets, chains, or single; cell-in-cell arrangements; marked anisonucleosis
Cytoplasm
─ Variable, scant to moderate, pale, basophilic, or vacuolated (mucin)
─ N:C is high
Nuclei
─ Enlarged, pleomorphic (variable size and shape), with irregular nuclear contours (notching, angulation, membrane thickening)
─ Hyperchromasia, coarsely granular, clumped, or irregularly distributed chromatin
─ Parachromatin clearing prominent
─ Nucleoli enlarged, irregular, and multiple; macronucleoli can be present
─ Mitotic figures, including atypical forms, may be seen but are not always numerous
Background
─ Often "dirty"; fragments of desmoplastic stroma; extracellular mucin may be seen
Absent
─ Features of specific differentiation (e.g., neuroendocrine, acinar, squamous, unless a variant); ovarian-type stroma
Ancillary studies
─ IHC: (+) CK7, CK19, CEA (often strong cytoplasmic/luminal), CA19-9, MUC1, MUC5AC; p53 (aberrant expression - strong diffuse positivity or complete absence often)
─ IHC: (-) SMAD4/DPC4 (loss in ~55% of cases, highly specific)
─ Molecular: KRAS mutations in >90%; TP53, CDKN2A/p16, SMAD4 mutations also common
DDx
─ Reactive ductal atypia (pancreatitis, stents): Can be very challenging; reactive changes usually show less architectural disarray, smoother nuclear contours, finer chromatin, less prominent nucleoli, and lack numerous single atypical cells
─ Cholangiocarcinoma: Morphologically and immunophenotypically very similar/identical; distinction based on primary site
─ High-grade PanIN or dysplasia in IPMN/MCN: Lack stromal invasion (though this is hard to assess on FNA alone)
─ Other adenocarcinomas (metastatic or other primary pancreatic types): Clinical history and IHC panel crucial
Note
─ Diagnosis relies on a combination of architectural disarray and high-grade nuclear atypia
─ Well-differentiated PDAC can be particularly difficult to distinguish from reactive changes
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Pancreatic Neuroendocrine Tumor (PanNET)
Neoplasm showing neuroendocrine differentiation, arising from islet cells or ductal pluripotent stem cells; graded by WHO as G1, G2, or G3 based on mitotic rate and Ki-67 index
Clinical
─ functional (hormone-secreting) or non-functional (most common)
─ Non-functional tumors often present due to mass effect or incidentally
─ May be part of MEN1 syndrome
─ Prognosis varies widely depending on grade, stage, and functionality
Cell patterns
─ Highly cellular; dispersed single cells, loose clusters, trabeculae, rosettes, or acinar-like arrangements; monomorphic round, oval, or plasmacytoid cells
Cytoplasm
─ Moderate amount, finely granular ("salt-and-pepper" on Romanowsky stains, eosinophilic to amphophilic on Pap), or clear
Nuclei
─ Round to oval, often eccentric (plasmacytoid appearance)
─ Finely stippled, "salt-and-pepper" or "powdery" chromatin characteristic
─ Nucleoli inconspicuous or small; can be more prominent in higher-grade lesions
─ Nuclear molding may be seen in cohesive groups
─ Minimal anisonucleosis in low-grade tumors; more pleomorphism in higher grades
─ Mitoses rare in G1, frequent in G2/G3
Background
─ Often bloody (high vascularity); lymphoglandular bodies (stripped cytoplasm); amyloid (in some types e.g., insulinoma)
Absent
─ Significant extracellular mucin; true glandular lumina or well-formed acini (unless mixed tumor); squamoid corpuscles
Ancillary studies
─ IHC: (+) Synaptophysin, Chromogranin A (Chromogranin may be focal or negative in poorly differentiated NETs/NECs), CD56, INSM1; Specific hormones (insulin, glucagon, gastrin, etc, if functional)
─ Ki-67 index: G1: <3%; G2: 3-20%; G3 PanNET: >20%
DDx
─ Acinar cell carcinoma: More cohesive, true acinar structures, coarser chromatin, prominent nucleoli, (+) trypsin/BCL10
─ Solid pseudopapillary neoplasm (SPN): Papillary structures, nuclear grooves, (+) nuclear β-catenin, CD10
─ Pancreatoblastoma: Squamoid corpuscles, acinar differentiation, typically in children
─ Well-differentiated PDAC: Glandular structures, mucin, different IHC
─ Lymphoma: Usually more pleomorphic lymphoid cells, (+) lymphoid markers
Note
─ "Salt-and-pepper" chromatin is a key feature
─ Grading (G1, G2, G3 PanNET) is essential for prognosis and management and relies on mitotic count and Ki-67 index, ideally assessed on histologic material or cell block
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Pancreatic Neuroendocrine Carcinoma (PanNEC)
high-grade, poorly differentiated neuroendocrine neoplasm, morphologically similar to small cell carcinoma or large cell neuroendocrine carcinoma of the lung
Clinical
─ Rare, aggressive tumors with poor prognosis; large at presentation, early metastases
─ May or may not be associated with a well-differentiated PanNET component
Cell patterns
─ Highly cellular; Small cell type (sheets/clusters/dispersed small cells, scant cytoplasm, molding, crush, mitoses/apoptosis) or Large cell type (sheets/clusters larger cells, more cytoplasm, vesicular nuclei, prominent nucleoli, mitoses/necrosis)
Cytoplasm
─ Small cell type: Very scant, often indistinct
─ Large cell type: Moderate, eosinophilic or amphophilic
Nuclei
─ Small cell type: Round to oval or spindled, hyperchromatic, finely granular to smudged chromatin, inconspicuous nucleoli, marked nuclear molding
─ Large cell type: Large, round to oval, vesicular or coarse chromatin, prominent nucleoli
─ High mitotic rate and extensive necrosis/apoptosis are characteristic of both
Background
─ Often necrotic, bloody, extensive crush artifact (esp small cell type)
Absent
─ Features of well-differentiated PanNET (e.g., plasmacytoid cells, salt-and-pepper chromatin throughout); glandular or acinar differentiation (unless combined tumor)
Ancillary studies
─ IHC: (+) Synaptophysin (often strong), CD56, INSM1, Cytokeratins (dot-like pattern can be seen); Chromogranin A (may be focal or negative)
─ Ki-67 index is very high (typically >50-60%, WHO defines NEC as >20% but most are much higher)
─ TP53 and RB alterations are common
DDx
─ Poorly differentiated pancreatic ductal adenocarcinoma: May show some neuroendocrine marker expression but usually has glandular features and different cytomorphology
─ Metastatic small cell or large cell neuroendocrine carcinoma (esp from lung): Clinically indistinguishable; IHC (TTF-1 may be positive in lung origin) and clinical history essential
─ Lymphoma/Leukemia: Dispersed atypical cells; (+) lymphoid markers
─ Acinar cell carcinoma: Can be poorly differentiated but usually shows some acinar features/markers
Note
─ Diagnosis requires neuroendocrine marker expression and high-grade morphology (high mitotic rate, necrosis)
─ Distinction from G3 PanNET can be challenging; PanNECs are generally more poorly differentiated with small cell or large cell neuroendocrine morphology, while G3 PanNETs still resemble their lower-grade counterparts but have higher proliferation
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Acinar Cell Carcinoma (Pancreas)
A malignant epithelial neoplasm showing predominantly acinar differentiation
Clinical
─ Rare, accounting for ~1-2% of exocrine pancreatic neoplasms
─ Can occur at any age, slight male predominance
─ May present with nonspecific abdominal symptoms, mass effect, or paraneoplastic syndromes (e.g., panniculitis due to lipase hypersecretion - Schmid's triad: subcutaneous fat necrosis, polyarthritis, eosinophilia)
─ Serum lipase may be elevated
─ Generally aggressive with poor prognosis, though better than PDAC for localized disease
Cell patterns
─ Highly cellular; cohesive clusters, acinar structures, sheets, or dispersed single cells; medium to large polygonal cells
Cytoplasm
─ Abundant, finely granular to coarsely granular (zymogen granules), eosinophilic or basophilic
─ Apical cytoplasmic granularity may be prominent in well-formed acini
─ Cell borders often distinct
Nuclei
─ Round to oval, often eccentric
─ Vesicular or coarsely granular chromatin
─ Single, prominent, centrally located nucleolus is characteristic
─ Anisonucleosis and pleomorphism can be variable; some tumors are quite monomorphic, others more pleomorphic
─ Mitotic figures may be present
Background
─ May be clean, hemorrhagic, or show necrosis; stripped nuclei with intact cytoplasm (acinar "ghosts") can be seen
Absent
─ Significant extracellular mucin; neuroendocrine features (unless mixed acinar-neuroendocrine carcinoma); ovarian-type stroma or squamoid corpuscles
Ancillary studies
─ IHC: (+) Trypsin, Chymotrypsin, BCL10 (nuclear and cytoplasmic), Pancreatic lipase, Cytokeratins (CK8/18, CAM5,2)
─ IHC: (-) Chromogranin, Synaptophysin (unless mixed tumor), nuclear β-catenin
DDx
─ Pancreatic neuroendocrine tumor (PanNET): Plasmacytoid cells, salt-and-pepper chromatin, (+) neuroendocrine markers
─ Solid pseudopapillary neoplasm (SPN): Papillary structures, nuclear grooves, (+) nuclear β-catenin
─ Pancreatoblastoma: Squamoid corpuscles, primitive component, typically in children
─ Well-differentiated PDAC with oncocytic or clear cell features: Lacks true acinar differentiation and zymogen granules; different IHC
─ Islet cell hyperplasia or normal acinar tissue: Less cellularity, no atypia, no discohesion
Note
─ Prominent nucleoli and granular cytoplasm are key features
─ Cytologic features can overlap with PanNET, requiring IHC for definitive classification
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🫁Respiratory
Inflammatory Cells Predominate (Lung Pattern 1)
Cytology
— Suppurative (Pneumonia): Numerous neutrophils, fibrinous/proteinaceous background, +/- organisms
— Histiocytic (Organizing Pneumonia): Predominantly histiocytes, thickened septal fragments, +/- pigment
— Granulomatous (Infection/Sarcoid): Epithelioid granulomas, +/- necrosis, +/- giant cells
DDx
— Squamous Cell Carcinoma
— —Can cavitate and be associated with suppuration or a granulomatous reaction to keratin
— Reactive Pneumocytes
— —Can show significant atypia and mimic adenocarcinoma
— Squamous Metaplasia
— —Can show significant atypia, mimicking squamous cell carcinoma
— Lymphoma / Seminoma
— —Can be associated with a granulomatous reaction
Note
— Cultures and special stains (GMS, ZN) are mandatory for suspected infection
— Non-infectious granulomatous disease (Sarcoid, Wegener) must be excluded
— The specific diagnosis depends on identifying the predominant inflammatory cell type and excluding malignancy
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Dispersed Lymphoid Cells (Lung Pattern 2)
Cytology
— Predominantly dispersed lymphoid cells
— High cellularity
— Population can be polymorphous (reactive) or monomorphous (neoplastic)
— Lymphoglandular bodies (cytoplasmic fragments) in background
DDx
— Reactive Lymphoid Hyperplasia
— —Polymorphous population with tangible body macrophages and germinal center fragments
— Non-Hodgkin Lymphoma (e.g., DLBCL, MALT)
— —Monomorphous population of atypical lymphoid cells
— Hodgkin Lymphoma
— —Diagnostic Reed-Sternberg cells in a mixed inflammatory background
— Thymoma
— —Bland epithelial cells (spindle or polygonal) admixed with mature lymphocytes
— Small Cell Carcinoma
— —Shows nuclear molding, crush artifact, and "salt-and-pepper" chromatin; lacks lymphoglandular bodies
Note
— Flow cytometry is essential to assess for clonality in non-Hodgkin lymphomas
— IHC is crucial for subtyping (e.g., CD30 for Hodgkin, CD20 for B-cell, TdT for lymphoblastic)
— Secondary involvement of the lung/mediastinum by lymphoma is more common than primary disease
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Epithelial Tissue Fragments With or Without Glandular Differentiation and With a Variable Number of Dispersed Cells, and With or Without Necrosis or Mucinous Background (Lung Pattern 3)
Cytology
— High cellularity
— Cohesive sheets, 3D groups with glandular, acinar, or papillary architecture
— Round/oval nuclei with fine chromatin and prominent, single central nucleoli
— Eccentric, pale, vacuolated cytoplasm
— Variable dispersed cells; may resemble histiocytes in mucinous type
— Necrosis or a mucinous background may be present
DDx
— Adenocarcinoma (Primary Lung)
— —Stereotypical lesion for this pattern; TTF1 and Napsin A positive
— Squamous Cell Carcinoma (Poorly Differentiated)
— —Differentiated by IHC (P40, CK5/6 positive)
— Metastatic Adenocarcinoma
— —Requires clinical history and IHC panel (e.g., CDX2 for colon, GATA3/ER for breast)
— Malignant Mesothelioma
— —Dense cytoplasm, intercellular "windows"; positive for calretinin, WT1
— Reactive Pneumocytes / Bronchial Cells
— —Less cellular, less architectural complexity, ciliation may be present
Note
— IHC is mandatory to differentiate adenocarcinoma from squamous cell carcinoma
— ROSE is crucial to ensure adequate material is triaged for molecular studies
— All adenocarcinomas require molecular testing (EGFR, ALK, etc.) for targeted therapy
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Epithelial Tissue Fragments and Plentiful Dispersed Cells Showing Varying Degrees of Squamous Differentiation With or Without Keratinous Debris and Necrosis (Lung Pattern 4)
Cytology
— Variable to high cellularity
— Cohesive sheets and dispersed single cells
— Squamous differentiation (keratinization, dense cytoplasm, tadpole/spindle cells)
— Hyperchromatic, irregular nuclei; pyknotic in well-differentiated forms
— Necrotic and/or keratinous background
DDx
— Squamous Cell Carcinoma (Primary vs. Metastatic)
— —Stereotypical lesion for this pattern
— —Cannot distinguish primary from metastatic on cytology alone
— Adenocarcinoma (Poorly Differentiated)
— —Lacks true keratinization; typically has eccentric nuclei, prominent nucleoli, and mucin
— Basaloid Carcinoma
— —Smaller basaloid cells, peripheral palisading, scant cytoplasm, high N:C ratio
— Squamous Metaplasia (Reactive)
— —Less cellular and less atypical than carcinoma; often in an inflammatory background
— Thymoma
— —Admixed with a significant benign lymphoid population
Note
— IHC is essential for confirmation (P40 and CK5/6 positive)
— p16 / HPV ISH can help identify metastatic origin from GYN or head and neck sites
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Predominantly Dispersed Cells With Discohesive Epithelial Tissue Fragments With or Without Chromatin Smearing and Karyorrhectic Debris (Lung Pattern 5)
Cytology
— High cellularity
— Dispersed cells and small, discohesive groups
— Scant cytoplasm, high N:C ratio
— "Salt-and-pepper" chromatin, inconspicuous nucleoli
— Prominent nuclear molding
— Crush artifact (chromatin smearing) and karyorrhectic debris
DDx
— Small Cell Carcinoma
— —Stereotypical lesion for this pattern
— Lymphoma
— —Lacks molding and crush; has lymphoglandular bodies in background
— Carcinoid Tumor
— —More cohesive, organoid pattern; more cytoplasm, lacks significant crush/necrosis
— Large Cell Neuroendocrine Carcinoma (LCNEC)
— —Larger cells with prominent nucleoli and more cytoplasm
— Basaloid Squamous Carcinoma
— —More cohesive, peripheral palisading, may have focal keratinization
— Poorly Differentiated Non-Small Cell Carcinoma
— —May show evidence of glandular (mucin) or squamous (dense cytoplasm) differentiation
Note
— IHC is essential for diagnosis (Synaptophysin, Chromogranin, CD56, TTF1 positive)
— Ki67 proliferation index is very high (>75%)
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Small Loosely Cohesive Epithelial Tissue Fragments and Dispersed Cells and Scattered Thin Capillary Meshworks (Lung Pattern 6)
Cytology
— High cellularity
— Loosely cohesive groups, dispersed cells, and thin capillary meshworks
— Monotonous round/oval cells with granular, plasmacytoid cytoplasm
— "Salt-and-pepper" chromatin, inconspicuous nucleoli
— Organoid architecture (rosettes, ribbons, trabeculae)
DDx
— Typical Carcinoid
— —Stereotypical lesion for this pattern
— Atypical Carcinoid
— —Features of typical carcinoid plus necrosis and/or increased mitoses
— Small Cell Carcinoma
— —Lacks significant molding, crush, and necrosis; has more cytoplasm
— Well-Differentiated Adenocarcinoma
— —Lacks true glandular formation; nuclei are stippled without prominent macronucleoli
— Metastatic Neuroendocrine Tumor
— —Cannot be distinguished from primary carcinoid on morphology alone; requires clinical history
Note
— IHC is essential for diagnosis (Synaptophysin, Chromogranin, CD56 positive)
— Ki67 proliferation index is low (<10%)
— A definitive diagnosis of 'atypical carcinoid' is difficult on FNA alone
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Stromal and Epithelial Components (Lung Pattern 7)
Cytology
— Variable cellularity
— Biphasic population of stromal and epithelial cells
— Key feature is the mix of mesenchymal elements: fibromyxoid stroma, cartilage, and fat
— Benign bronchial epithelium, sometimes with mild reactive atypia
DDx
— Pulmonary Hamartoma
— —Stereotypical lesion for this pattern
— Carcinosarcoma / Pleomorphic Carcinoma
— —Both epithelial and stromal components are frankly malignant
— Pulmonary Blastoma
— —Primitive epithelial (fetal adenocarcinoma) and mesenchymal (sarcomatous) components
— Sclerosing Pneumocytoma
— —Dual population of surface cuboidal cells and round stromal cells; prominent vascular meshwork
— Salivary Gland-Type Tumors (e.g., Adenoid Cystic)
— —Shows characteristic features of salivary gland tumors (e.g., "gum balls" in AdCC)
— Organizing Pneumonia
— —Fragments of thickened alveolar septa with histiocytes (lacks true cartilage/fat)
Note
— The diagnosis of hamartoma relies on identifying the classic triad of cartilage, fibromyxoid stroma, and benign epithelium
— Myxoid stroma is metachromatic (magenta) on Giemsa but can be missed on Pap stain
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Stromal Components Without Epithelium (Lung Pattern 8)
Cytology
— High cellularity
— Plump spindle cells, singly and in groups
— Atypical features: bizarre cells, large/hyperchromatic nuclei, prominent nucleoli
— Lacks a definitive epithelial component
DDx
— Metastatic Sarcoma
— —Most common entity in this pattern; requires clinical history
— Primary Sarcoma (e.g., Synovial Sarcoma)
— —Diagnosis often relies on IHC and molecular (e.g., t(X;18) for synovial)
— Sarcomatoid Mesothelioma
— —Spindle cell proliferation; confirmed by positive mesothelial IHC markers (Calretinin, WT1, etc.)
— Solitary Fibrous Tumor
— —Spindle cells with fibrovascular material; confirmed by IHC (CD34, STAT6 positive)
— Inflammatory Myofibroblastic Tumor
— —Mildly pleomorphic spindle cells with a prominent inflammatory background
Note
— IHC is essential to differentiate sarcoma from sarcomatoid carcinoma
— A broad IHC panel (pankeratin, vimentin, S100, actin, desmin) is recommended for initial workup
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Insufficient, Inadequate, or Non-diagnostic (Lung WHO)
This category indicates that the specimen is unsatisfactory for a diagnostic interpretation because it lacks sufficient material in quantity or quality for a reliable diagnosis, or that the findings do not explain the targeted lesion or clinical symptoms.
Criteria
─ Paucity of cellular material, extensive necrosis, or poor preparation (e.g., extensive air-drying, crush, poor staining) that precludes evaluation
─ Excessive blood, inflammatory cells, or mucus that obscures cellular material
─ Sputum samples that lack a sufficient number of alveolar macrophages, suggesting the sample is from the upper airway rather than a deep-cough specimen
─ Targeted FNAB of a discrete mass/lesion that yields only normal cellular elements (e.g., bronchial cells) that do not explain the lesion
─ EBUS-TBNA of a lymph node target that lacks adequate lymphoid material (e.g., <40 lymphocytes per high-power field) and contains only benign bronchial cells or blood
─ Bronchial brushing (BB) specimens that lack abundant bronchial epithelial cells
Clinical
─ Provides no useful diagnostic information about the targeted lesion. The overall risk of malignancy (ROM) for this category is approximately 40–60%, varying by the sampling method: ~40% for EBUS-TBFNAB, up to 60% for transthoracic FNAB, and >60% for exfoliative samples. Management requires a review of clinical and imaging findings, often in a multidisciplinary setting, to decide whether to repeat the procedure or use a more invasive test. The reason for the inadequacy should be stated in the report to help guide subsequent procedures.
Note
─ Any degree of cellular atypia, however scant, generally precludes this category; such cases are categorized as "Atypical".
─ The entire specimen should be processed and examined before designating it as nondiagnostic.
─ Correlation with clinical and imaging findings is essential. If a specimen contains adequate, benign cellular material that does not explain a suspicious mass lesion, it is recommended to report it as "Benign" with a comment that the material may not be representative and that further sampling is recommended, rather than classifying it as "Non-diagnostic".
Benign or Negative for Malignancy (Lung WHO)
This category is used for specimens that demonstrate unequivocal benign cytopathological features, which may or may not be diagnostic of a specific benign process or neoplasm.
Criteria
─ The sample contains unequivocally benign features, which may be diagnostic of a specific inflammatory process (e.g., granulomas) or a benign neoplasm (e.g., hamartoma), or may consist of normal lung components (bronchial cells, alveolar macrophages, alveolar septa).
─ The cytopathological findings must be correlated with clinical and imaging findings to ensure they adequately explain the targeted lesion.
─ Cells exhibit features of benignity, such as cilia on columnar cells, orderly cell groups, low nuclear-to-cytoplasmic ratios, smooth nuclear contours, and fine chromatin.
─ For exfoliative specimens like sputum or BAL, the presence of adequate alveolar macrophages is a key feature of sample adequacy.
Note
─ The risk of malignancy (ROM) for this category is highly variable, generally reported to be between 24% and 42%, due to the possibility of sampling error.
─ Correlation with imaging is critical. If an FNA of a nodule suspicious for malignancy yields only benign components, the case can be categorized as "Benign," but the report must include a caveat stating that "the material may not represent the lesion seen on imaging" and that further evaluation may be required.
─ Management depends on the clinical context. If the benign diagnosis correlates with imaging, routine follow-up is typically recommended. If there is a discrepancy, further investigation (e.g., repeat sampling, core biopsy) is necessary.
Inflammatory
─ Acute inflammation (e.g., bacterial pneumonia, abscess); characterized by a predominance of neutrophils.
─ Granulomatous inflammation (e.g., sarcoidosis, mycobacterial or fungal infection); features epithelioid histiocytes, giant cells, and lymphocytes. Necrosis may be present. Samples should be triaged for special stains and microbiological cultures.
─ Other inflammatory patterns include histiocytic, lymphocytic, or eosinophilic inflammation. Specific diagnoses like lipid pneumonia or foreign body aspiration should be made when possible.
Neoplasm
─ Pulmonary hamartoma (a mix of cartilage, fibromyxoid stroma, benign epithelium, and fat).
─ Sclerosing pneumocytoma (shows a dual population of surface cuboidal cells and stromal round cells).
─ Other benign neoplasms include granular cell tumor, bronchial papillomas, and schwannoma.
─ Treatment for benign neoplasms depends on symptoms. Symptomatic or endobronchial lesions are often treated with limited surgical resection, while asymptomatic tumors may be clinically followed.
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Atypical (Lung WHO)
This category is for specimens that show features predominantly seen in benign lesions but also have minimal features that raise the possibility of malignancy, with insufficient evidence in quantity or quality to make a definitive benign or malignant diagnosis.
Criteria
─ Cytomorphologic features (architectural or nuclear) exceed those of benign reactive conditions but fall short of a "Suspicious for Malignancy" or "Malignant" diagnosis. The atypia may be qualitative or quantitative.
─ Extreme reactive and reparative cellular changes that mimic malignancy, often occurring in the context of inflammation, infection, radiation, or chemotherapy.
─ Squamous or other metaplastic changes (e.g., goblet cell hyperplasia) that cannot be definitively distinguished from a neoplastic process.
─ Scant cellularity, with only a few cells showing cytomorphological features suggestive of malignancy.
─ Background elements are suggestive of a neoplasm (e.g., necrotic or keratinous debris, thick mucin), but definitive malignant cells are absent or poorly preserved.
─ Bland-appearing spindle cell lesions where ancillary testing is needed for a specific diagnosis.
Note
─ This category helps maintain a high negative predictive value for the "Benign" category and a high positive predictive value for the "Malignant" category. It should be used sparingly.
─ Clinical and radiologic correlation is critical. A key feature favoring neoplasia is a distinct population of atypical cells, whereas a continuum from normal to atypical cells suggests a reactive process.
─ The term "inflammatory atypia" should be avoided. If changes are confidently reactive, the "Benign" category is preferred.
─ If additional laboratory studies resolve the diagnostic dilemma, the case may be upgraded to "Suspicious" or "Malignant" or downgraded to "Benign."
Risk of Malignancy (ROM)
─ The reported ROM for the "Atypical" category varies widely, from 22% to 62%.
─ More recent studies distinguish it from the "Suspicious" category and report a ROM of 50–60%.
Management
─ The initial step is correlation with clinical and imaging findings.
─ If imaging is atypical or concerning for malignancy, further investigation is required, such as a repeat cytologic study or a more invasive procedure (e.g., core needle biopsy).
─ If clinical and imaging features are benign, a period of clinical observation may be appropriate.
─ Ancillary tests on specimens with scant atypical cells are generally not recommended, but for adequately cellular samples (e.g., atypical lymphoid cells), further studies like flow cytometry can be useful.
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Suspicious for Malignancy (SM) (Lung WHO)
This category is for specimens that demonstrate some cytopathological features suggestive of malignancy but have insufficient features, either in number or quality, to make an unequivocal diagnosis of malignancy. It is used for cases the cytopathologist assesses as most likely malignant but where there is a degree of uncertainty.
Criteria
─ The category is applied in cases with significant cytopathological atypia, including nuclear enlargement, anisonucleosis, irregular nuclear membranes, coarse or hyperchromatic chromatin, and prominent or irregular nucleoli.
─ Architectural features are concerning, such as loss of polarity, nuclear crowding, and molding.
─ The uncertainty is due to either a small number of cells showing these features (quantitative) or because the qualitative features are not definitive for malignancy.
─ This category may be used in specific scenarios:
─ Necrotic tumors yielding limited intact cells.
─ Dense, obscuring inflammatory or granulomatous backgrounds.
─ Tumors with a prominent fibrotic component.
─ Well-differentiated adenocarcinoma where subtle atypia overlaps with inflamed reactive epithelium.
─ Significant atypia in a low-cellularity sample following radiation or chemotherapy.
Note
─ This category is applicable to any suspected malignant tumor type (e.g., non-small cell carcinoma, neuroendocrine tumors, lymphoma, metastasis), and the suspected tumor type or differential diagnosis should be stated in the report.
─ The use of this category has a high rate of interobserver variability; consultation with experienced colleagues is recommended.
─ Ancillary techniques like immunohistochemistry can assist but may be limited by the quantity or quality of the suspicious cells. Markers like TTF1 and p40 do not definitively separate benign from malignant cells.
─ This diagnosis should not be used as the sole basis for definitive therapy but is meant to convey a high degree of concern to the clinical team.
Risk of Malignancy (ROM)
─ The risk of malignancy is high, estimated to be 75–100% for exfoliative samples and 75–88% for FNAB. The overall ROM is approximately 82%.
Management
─ It is mandatory to review the clinical presentation and imaging findings, ideally in a multidisciplinary setting.
─ Further diagnostic steps are typically required to establish a definitive diagnosis.
─ This may include repeating the cytologic procedure (preferably with rapid onsite evaluation), obtaining a core needle biopsy, or proceeding to a surgical biopsy.
─ While not a final diagnosis of malignancy, in cases with correlating suspicious clinical and imaging findings, a multidisciplinary team may decide to proceed to specific treatment.
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Malignant (Lung WHO)
This category is used when the specimen demonstrates unequivocal cytopathological features of malignancy. A diagnosis should be rendered only in specimens with adequate cellularity demonstrating definitive key diagnostic criteria.
General Criteria for Malignancy (Non-Small Cell Carcinoma)
─ Cytomorphology showing features of either adenocarcinoma (distinct glandular morphology with or without mucin production) or squamous cell carcinoma (keratinization).
─ Increased cellularity with dyscohesion or abnormal architectural arrangements.
─ High nuclear-to-cytoplasmic (N:C) ratio.
─ Nuclear pleomorphism (variation in size and shape).
─ Irregular nuclear membranes.
─ Hyperchromasia and irregular chromatin clumping.
─ Macronucleoli or irregular nucleoli.
─ Necrotic background (tumor diathesis) may be present.
Note
─ Subtyping and Ancillary Studies: Precise characterization is essential for targeted therapy.
─ Good accuracy (>70%) can be achieved in differentiating non-small cell carcinoma from small cell neuroendocrine carcinoma based on morphology alone.
─ However, the current standard of care requires specific classification of non-small cell carcinoma as adenocarcinoma or squamous cell carcinoma, which can be achieved with a limited immunohistochemistry (ICC) panel (e.g., TTF1, p40, napsin A).
─ The designation "Non-small cell carcinoma, NOS" is appropriate for poorly differentiated carcinomas lacking clear differentiation by both morphology and ICC.
─ It is critical to conserve tissue for molecular biomarker testing (e.g., EGFR, ALK, ROS1), which can be successfully performed on cytology samples.
─ Reporting: The report should include the "Malignant" category, a specific diagnosis according to the WHO classification if possible, and a brief differential diagnosis if not. Any ancillary test results (ICC, molecular) should be incorporated into a final, integrated report.
─ Other Malignancies: This category also includes salivary gland–type carcinomas, neuroendocrine tumors (NETs), lymphoproliferative malignancies, mesenchymal tumors, mesothelioma, and metastatic malignancies. The cytopathologist should provide as specific a diagnosis as possible.
Risk of Malignancy (ROM)
─ The risk of malignancy for this category is very high.
─ Sputum: 100%
─ Exfoliative (Bronchial Wash/Brush): 94–100%
─ FNAB: 87–100%
Management
─ Management is determined after correlation with clinical and imaging findings, ideally in a multidisciplinary setting.
─ A diagnosis of malignancy on a cytology specimen, when correlated with clinical and imaging findings, is often sufficient to proceed to definitive treatment.
─ Sputum: If a sputum sample is malignant, the next step is typically bronchoscopy and/or imaging to localize the lesion for biopsy and staging.
─ Bronchial Wash/Brush: For a peripheral non-small cell lung cancer without metastasis, management depends on imaging. Small tumors may proceed directly to surgical resection. Larger tumors or those with suspicious lymph nodes on imaging require mediastinal staging, usually via endobronchial ultrasound–guided FNAB.
─ FNAB: If the FNAB is malignant and correlates with findings, treatment decisions can be made. If there is insufficient material for necessary ancillary testing, a repeat FNAB with or without a core needle biopsy should be considered.
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Granular cell tumor (Lung)
An uncommon benign neoplasm, thought to be of Schwann cell origin, that can occur in the tracheobronchial tree and is composed of cells with abundant eosinophilic granular cytoplasm
Clinical
─ Typically occurs in middle-aged adults (4th-6th decades), but wide age range
─ Slight female predominance noted in some series, others report male predominance or no sex predilection for pulmonary lesions
─ Most are endobronchial, arising in larger airways; less commonly parenchymal
─ Patients may be asymptomatic (incidental finding on bronchoscopy or imaging) or present with cough, wheezing, dyspnea, or hemoptysis if the tumor causes obstruction
─ Often solitary, but multiple tumors can occur, especially in the tracheobronchial tree
Cytology
─ Cells are polygonal to round, arranged in cohesive clusters, syncytial groups, or as isolated cells; cellularity can be variable
─ Cytoplasm is abundant, dense, and strikingly granular (eosinophilic with Pap stain, can be basophilic with Giemsa); granules are fine and uniform; cell borders are often distinct but can be ill-defined in groups
─ Nuclei show small, round to oval features, often eccentrically placed; chromatin is finely granular and evenly distributed; nucleoli are typically inconspicuous or absent
─ Background shows may contain numerous stripped, bare nuclei and granular cytoplasmic debris due to cell fragility; generally clean otherwise, without significant inflammation or necrosis unless ulcerated
─ Absence of significant nuclear pleomorphism, hyperchromasia, mitotic activity, or true necrosis (in benign cases); absence of keratinization or glandular features
Ancillary studies
─ IHC (+): S100 protein (strong and diffuse); SOX10; CD68 (lysosomal marker, highlights granules); PAS-D (Periodic Acid-Schiff with diastase, highlights granules); Inhibin-alpha; TFE3
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2); Neuroendocrine markers (Chromogranin, Synaptophysin); TTF-1; Desmin; Myogenin
DDx
─ Macrophages/Histiocytes (less cohesive, more variable nuclei, cytoplasm often foamy or vacuolated rather than densely granular, CD68 positive but S100/SOX10 negative)
─ Oncocytic cells / Oncocytoma (more prominent nucleoli, mitochondria-rich cytoplasm but not as distinctly granular, S100 negative or focal)
─ Carcinoid tumor (neuroendocrine nuclear features – salt-and-pepper chromatin, more cohesive, synaptophysin/chromogranin positive)
─ Squamous metaplasia (more cohesive sheets, denser cytoplasm, intercellular bridges if visible, keratin positive)
─ Alveolar soft part sarcoma (rare in lung, different clinical context, prominent nucleoli, characteristic crystals, TFE3 positive but S100 negative)
─ Rhabdomyoma (extremely rare in lung, may show cross-striations, desmin/myogenin positive)
─ Melanoma (can have granular cells, but usually more pleomorphism, prominent nucleoli, other melanoma markers like Melan-A/HMB45 positive)
Prognosis
─ Almost always benign; malignant granular cell tumors are exceedingly rare, especially in the lung
─ Local recurrence is possible if incompletely excised
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Pulmonary Hamartomas (Lung)
A benign mesenchymal neoplasm of the lung, the most common benign lung tumor, typically discovered incidentally as a solitary, well-circumscribed peripheral "coin lesion"
Clinical
─ Most common benign lung tumor
─ Usually discovered incidentally in adults (peak 50-70 years) on imaging
─ Slight male predominance
─ Typically a solitary, peripheral, well-circumscribed, slow-growing "coin lesion" <4 cm
─ Less commonly central/endobronchial, which may cause obstructive symptoms
─ Multiple hamartomas are rare, may be associated with Carney triad (pulmonary hamartoma, GIST, paraganglioma) or Cowden syndrome
─ Radiologic "popcorn" calcification is characteristic but not always present
Cytology
─ Cells are a biphasic admixture of mesenchymal and epithelial elements; aspirates may be variably cellular depending on the components sampled
─ Cytoplasm is variable: epithelial cells (bronchial type) have scant to moderate, often pale or clear cytoplasm, may be ciliated; spindle cells (fibromyxoid stroma) have scant, wispy cytoplasm; chondrocytes have clear cytoplasm within lacunae; adipocytes have abundant clear cytoplasm
─ Nuclei show benign features: epithelial cells have round to oval, normochromatic nuclei with smooth contours and fine chromatin; spindle cells have bland, elongated nuclei; chondrocytes have small, dark, round nuclei; adipocyte nuclei are small and peripheral
─ Background shows often a key diagnostic feature: fragments of mature hyaline cartilage (chondroid material – dense, glassy, metachromatic with Giemsa, pale blue/green with Pap); fibromyxoid stroma (loose, fibrillary, metachromatic with Giemsa); mature adipose tissue fragments; benign respiratory epithelial cells in flat sheets or small clusters
─ Absence of significant atypia, mitoses, or necrosis; absence of a predominant atypical epithelial population (unlike adenocarcinoma); absence of atypical chondrocytes (unlike chondrosarcoma)
Ancillary studies
─ IHC (+): Mesenchymal spindle cells and chondrocytes are S100 positive; Epithelial cells are cytokeratin positive (e g , CK7, CAM5.2) and TTF-1 positive
─ Molecular ─ Clonal chromosomal abnormalities involving HMGA2 (12q14-15) or HMGA1 (6p21) genes are common, confirming neoplastic nature
DDx
─ Adenocarcinoma, well-differentiated (especially lepidic or acinar; shows more atypia, complex glandular architecture, lacks mesenchymal components)
─ Carcinoid tumor (neuroendocrine features, lacks mesenchymal components)
─ Metastatic chondrosarcoma (rare, more cellular and atypical cartilage, clinical history)
─ Reactive bronchial cells (may show some atypia but usually ciliated, no mesenchymal elements)
─ Sclerosing pneumocytoma (dual population of cuboidal surface cells and stromal round cells, lacks cartilage and fat)
─ Organizing pneumonia (fibroblastic proliferation, inflammatory cells, no true cartilage)
Prognosis
─ Benign with excellent prognosis; malignant transformation is exceptionally rare
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Schwannoma (Lung)
A benign, encapsulated neoplasm arising from Schwann cells of nerve sheaths; primary pulmonary schwannomas are rare
Clinical
─ Primary pulmonary schwannomas are very rare (0.2% of all lung neoplasms)
─ Can occur at any age, no strong sex predilection for pulmonary lesions
─ Often asymptomatic and discovered incidentally as a solitary, well-circumscribed peripheral nodule or an endobronchial mass
─ Endobronchial lesions may cause cough, dyspnea, or obstruction
─ Multiple lesions may occur in the context of neurofibromatosis type 2 (NF2) or schwannomatosis
Cytology
─ Cells are predominantly spindle-shaped, arranged in cohesive fascicles, Verocay bodies (palisading nuclei around acellular eosinophilic zones – Antoni A areas), or loosely textured myxoid areas (Antoni B areas); cellularity varies with Antoni A areas being more cellular
─ Cytoplasm is typically scant to moderate, pale, fibrillary, with indistinct cell borders; may appear wavy or "shredded"
─ Nuclei show elongated, slender, wavy, buckled, or comma-shaped features with pointed ends; chromatin is finely granular and evenly distributed; nucleoli are usually inconspicuous; "ancient change" may show focal pleomorphism and hyperchromasia but lacks mitoses
─ Background shows often contains fragments of collagenous or myxoid stroma; generally clean unless cystic degeneration (common in larger lesions) or hemorrhage has occurred; hemosiderin-laden macrophages may be seen with cystic change
─ Absence of significant mitotic activity (usually rare or absent), necrosis (unless ancient/cystic change), or epithelial features (glands, keratinization)
Ancillary studies
─ IHC (+): S100 protein (strong and diffuse, nuclear and cytoplasmic); SOX10; Vimentin; CD57 (Leu-7); GFAP (variable, often focal)
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2); EMA; Desmin; SMA; CD34; TTF-1
DDx
─ Neurofibroma (less cellular, more haphazard arrangement, wavy cells in a collagenous stroma, admixed mast cells, S100 often less diffuse and includes staining of admixed axons)
─ Leiomyoma (blunt-ended "cigar-shaped" nuclei, more abundant eosinophilic cytoplasm, desmin/SMA positive)
─ Solitary fibrous tumor (patternless architecture, "hemangiopericytoma-like" vessels, CD34/STAT6 positive)
─ Spindle cell (sarcomatoid) carcinoma (more atypia, pleomorphism, mitoses, cytokeratin positive)
─ Malignant peripheral nerve sheath tumor (MPNST) (more cellularity, atypia, mitoses, necrosis, often associated with NF1, S100 often lost or focal)
─ Fibroblastic/myofibroblastic lesions (variable S100, other markers depending on entity)
Prognosis
─ Benign; recurrence after complete excision is rare; malignant transformation is exceptionally rare (usually in NF1 setting or large, deep-seated tumors)
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PEComa (Perivascular epithelioid cell tumor) (Lung)
A rare mesenchymal neoplasm family characterized by distinctive perivascular epithelioid cells, co-expressing melanocytic and smooth muscle markers; pulmonary PEComas include the benign clear cell "sugar" tumor and lymphangioleiomyomatosis (LAM)
Clinical
─ Primary pulmonary PEComas (including "sugar tumor") are very rare
─ "Sugar tumors" typically occur in middle-aged adults (median 50s), slight female predilection; usually asymptomatic, incidental peripheral solitary nodules
─ LAM almost exclusively affects women of reproductive age, often associated with tuberous sclerosis complex (TSC); presents with cystic lung disease, dyspnea, pneumothorax
─ Other PEComas can occur at various sites and may rarely metastasize to the lung
Cytology
(Features primarily describe benign clear cell "sugar" tumor, as LAM is usually diagnosed on biopsy/imaging) ─ Cells are polygonal to epithelioid, sometimes spindle-shaped, arranged in loose clusters, sheets, or as single cells; often intimately associated with thin-walled blood vessels; aspirates can be variably cellular, sometimes paucicellular
─ Cytoplasm is typically abundant, clear to pale eosinophilic, and finely granular or vacuolated due to glycogen (PAS positive, diastase sensitive); cell borders are usually distinct
─ Nuclei show round to oval features with smooth contours; finely granular, evenly distributed chromatin; nucleoli are generally small and inconspicuous in benign lesions; minimal pleomorphism
─ Background shows usually clean; may have delicate capillary network; necrosis is absent in benign lesions
─ Absence of significant nuclear atypia, hyperchromasia, high mitotic activity, or necrosis (in benign "sugar tumor"); absence of overt keratinization or glandular formation
Ancillary studies
─ IHC (+): HMB-45 (often strong and diffuse); Melan-A (MART-1); Smooth muscle actin (SMA); Desmin (variable); Calponin; MiTF (microphthalmia-associated transcription factor)
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2 usually); S100 protein (usually); TTF-1; Neuroendocrine markers (Chromogranin, Synaptophysin); CD34
─ Molecular ─ Mutations in TSC1 or TSC2 genes are characteristic of LAM and a subset of other PEComas, leading to mTOR pathway activation; TFE3 gene fusions (e g , with SFPQ) reported in a distinct subset of PEComas not associated with TSC
DDx
─ Metastatic clear cell renal cell carcinoma (RCCAM positive, PAX8 positive, CD10 positive, cytokeratin positive)
─ Metastatic adrenal cortical carcinoma (inhibin, calretinin, Melan-A positive, but different morphology and clinical context, SF-1 positive)
─ Metastatic melanoma (S100, SOX10 positive, HMB-45/Melan-A also positive but usually more pleomorphism and prominent nucleoli if not amelanotic)
─ Granular cell tumor (S100 positive, more distinctly granular cytoplasm, HMB-45/Melan-A negative)
─ Clear cell variant of adenocarcinoma (TTF-1, Napsin A, cytokeratin positive)
─ Oncocytoma/oncocytic carcinoid (oncocytic features, neuroendocrine markers for carcinoid, HMB-45/Melan-A negative)
─ Alveolar soft part sarcoma (ASPSCR1-TFE3 fusion, different morphology, characteristic crystals, HMB-45/Melan-A negative)
─ Paraganglioma (neuroendocrine markers positive, S100 positive sustentacular cells, HMB-45/Melan-A negative)
Prognosis
─ Benign clear cell "sugar" tumors of the lung are indolent with excellent prognosis after resection
─ LAM is a progressive disease, though mTOR inhibitors (e g , sirolimus) can stabilize lung function
─ Other PEComas have a variable prognosis; malignant PEComas are defined by features like large size, infiltrative growth, high nuclear grade, necrosis, and mitotic activity, and can metastasize
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Meningioma (Lung)
Benign neoplasms arising from arachnoidal (meningothelial) cells; primary intrapulmonary or mediastinal meningiomas are exceedingly rare, but can occur, and are more common in middle-aged women
Clinical
─ Primary pulmonary or mediastinal meningiomas are rare; usually asymptomatic and found incidentally as solitary, well-circumscribed peripheral nodules
─ More common in middle-aged to elderly women (F>M)
─ Metastatic meningioma to the lung is more common than primary pulmonary meningioma, though CSF spread of CNS meningiomas is itself uncommon
─ May be associated with a history of meningioma elsewhere if metastatic
Cytology
─ Cells are spindle to epithelioid, arranged in cohesive, syncytial-type clusters, sheets, nests, and characteristic whorls; cellularity can be moderate
─ Cytoplasm is usually pale, eosinophilic, and ill-defined with wispy cell borders; amount is moderate
─ Nuclei show bland, oval to elongated features with smooth contours and finely granular chromatin; small, indistinct nucleoli; intranuclear cytoplasmic pseudoinclusions are characteristic and can be numerous; nuclear grooves may be seen
─ Background shows psammoma bodies (laminated calcifications) may be present, especially in the psammomatous variant; generally clean unless hemorrhage or cystic change has occurred
─ Absence of significant atypia, frequent mitoses (in benign WHO Grade I cases); absence of prominent macronucleoli (unlike some carcinomas); absence of diffuse S100 positivity (unlike schwannoma); absence of TTF-1 (unlike lung adenocarcinoma)
Ancillary studies
─ IHC (+): EMA (epithelial membrane antigen, often strong), Vimentin, Progesterone receptor (PR, often strong in female patients), Somatostatin receptor 2A (SSTR2A)
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2 usually, though focal positivity can occur), S100 protein (usually negative or only focal/weak, helps distinguish from schwannoma), TTF-1, Napsin A, Chromogranin, Synaptophysin
─ Molecular ─ NF2 gene mutations are common in CNS meningiomas (especially fibrous, transitional, psammomatous types); data for primary pulmonary meningiomas is limited but similar alterations can be seen
DDx
─ Solitary fibrous tumor (STAT6 positive, CD34 positive, EMA negative)
─ Schwannoma (S100 and SOX10 strong/diffuse positive, EMA negative, lacks whorls and pseudoinclusions)
─ Carcinoid tumor (neuroendocrine markers positive, EMA negative or focal)
─ Low-grade adenocarcinoma of lung (TTF-1, Napsin A positive, more glandular features)
─ Metastatic carcinoma (e g , breast, renal; depends on primary, specific markers like GATA3, PAX8 helpful)
─ Reactive fibroblasts or mesothelial cells (especially if few cells and prominent spindle morphology or if pleural-based)
─ Well-differentiated papillary mesothelioma (if pleural based, calretinin, WT-1, D2-40 positive)
Prognosis
─ Primary pulmonary/mediastinal WHO Grade I meningiomas are typically benign and have an excellent prognosis after complete resection
─ WHO Grade II (atypical) and Grade III (anaplastic/malignant) meningiomas are much rarer in extraneuraxial sites but behave more aggressively
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Sclerosing Pneumocytoma (Lung)
A rare, benign neoplasm of the lung, previously termed sclerosing hemangioma, thought to derive from primitive respiratory precursor cells related to type II pneumocytes; typically presents in middle-aged women as an incidental peripheral, well-circumscribed nodule
Clinical
─ More common in middle-aged women (4th-6th decades), particularly in Asian populations
─ Usually an asymptomatic, incidental finding as a solitary, peripheral, well-circumscribed nodule on imaging (often <3 cm)
─ Rarely, patients may present with cough or hemoptysis
─ Multiple lesions are very rare
─ Low 18F-fluorodeoxyglucose (FDG) avidity on PET scan is typical
Cytology
─ Cells are typically a dual population: (1) cuboidal to polygonal surface cells lining papillae or small spaces, and (2) round to oval, sometimes spindled, stromal-like cells forming solid sheets or clusters, often predominating; poorly formed papillary structures and hemorrhagic background are common
─ Cytoplasm is scant to moderate and pale or eosinophilic in stromal-like cells; surface cuboidal cells have features similar to type II pneumocytes with clear, vacuolated, or granular eosinophilic cytoplasm
─ Nuclei show monomorphic, round to ovoid features with smooth nuclear contours, finely granular chromatin, and inconspicuous or small nucleoli in both cell types; intranuclear pseudoinclusions may be seen in surface cells
─ Background shows often hemorrhagic; hemosiderin-laden macrophages may be present; sclerosis (fibrous stroma) is a key histologic feature but may be difficult to appreciate as distinct stromal fragments cytologically, though some hyalinized stromal fragments can be seen
─ Absence of significant atypia, high mitotic activity, or necrosis; the dual population with bland cytology is characteristic
Ancillary studies
─ IHC (+): Both surface cuboidal cells and stromal-like cells are positive for TTF-1 and EMA (EMA often dot-like or membranous in stromal cells); Surface cells are also positive for cytokeratins (e g , CK7, CAM5.2) and surfactant proteins (e g , Napsin A)
─ IHC (-): Both cell types are negative for neuroendocrine markers (Chromogranin, Synaptophysin, CD56) and S100 protein
DDx
─ Adenocarcinoma, well-differentiated (especially lepidic or papillary predominant; typically shows more nuclear atypia, architectural complexity, prominent nucleoli, and lacks the distinct bland round stromal cell component; stromal cells of pneumocytoma are CK negative or only focally positive unlike adenocarcinoma)
─ Carcinoid tumor (neuroendocrine features, "salt-and-pepper" chromatin, synaptophysin/chromogranin positive, lacks dual population)
─ Pulmonary hamartoma (contains cartilage and often fibromyxoid stroma, lacks the characteristic dual cell population of pneumocytoma)
─ Metastatic papillary thyroid carcinoma (papillary structures, psammoma bodies may be present, characteristic nuclear features of PTC, thyroglobulin and PAX8 positive)
─ Reactive pneumocyte hyperplasia (often in a background of inflammation or injury, lacks the distinct stromal cell component and organized papillary/solid architecture)
─ Meningioma (if prominent stromal cells; meningioma has whorls, pseudoinclusions, EMA/PR positive, TTF-1 negative)
Prognosis
─ Benign, with excellent prognosis after complete resection; recurrence or metastasis is exceptionally rare
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Solitary tracheobronchial papilloma
A rare, benign exophytic tumor of the larger airways (trachea and bronchi), characterized by fibrovascular cores lined by squamous, glandular (respiratory or mucinous), or mixed epithelium
Clinical
─ Rare, accounting for <1% of all lung tumors
─ Can occur at any age, but often in adults; squamous type more common in adults, glandular in children
─ Patients may be asymptomatic or present with cough, hemoptysis, wheezing, or postobstructive pneumonia due to airway obstruction
─ Usually solitary, but multiple squamous papillomas (papillomatosis) can occur, especially in children and young adults, strongly associated with HPV types 6 and 11 (often acquired from maternal genital infection)
─ Glandular papillomas are not typically HPV-related
Cytology
(Obtained via bronchial brushing, washing, or FNA of an endobronchial lesion) ─ Cells are dependent on the papilloma subtype:
─ Squamous papillomas: Show clusters and sheets of mature squamous cells, which may be keratinizing or non-keratinizing; koilocytic atypia (perinuclear halo, nuclear atypia) may be seen if HPV-related; anucleated squames and parakeratotic cells can be present
─ Glandular papillomas: Show clusters of benign-appearing columnar cells, which may be ciliated (respiratory type) or mucin-producing (goblet cell type); cells are often arranged in papillary fronds or tight clusters
─ Mixed papillomas: Show features of both squamous and glandular types
─ Cytoplasm is typically abundant and corresponds to cell type (e g , dense/keratinized in squamous, vacuolated/mucinous in glandular, ciliated in respiratory)
─ Nuclei show generally bland features consistent with benign squamous or glandular epithelium; mild reactive atypia (nuclear enlargement, slight hyperchromasia) may be present, especially if inflamed or previously manipulated; mitoses are usually few or absent
─ Background shows may be clean or contain inflammatory cells (neutrophils, lymphocytes) if secondarily infected or irritated; mucin may be present with glandular or mixed types; fragments of fibrovascular cores are rarely seen but are diagnostic if present
─ Absence of high-grade malignant features (significant pleomorphism, coarse chromatin, macronucleoli, atypical mitoses); absence of true stromal invasion if tissue fragments are evaluable
Ancillary studies
─ IHC (+): Squamous cells are pankeratin positive, p40/p63 positive; Glandular cells are pankeratin positive (e g , CK7); HPV (by ISH or PCR, especially for HPV 6/11 in squamous papillomas/papillomatosis)
─ Molecular ─ BRAF V600E mutations have been reported in some peripheral glandular papillomas/adenomas; EGFR and KRAS mutations also described in some benign papillary lesions of distal airways; significance in tracheobronchial papillomas less clear
DDx
─ Squamous cell carcinoma (if squamous papilloma with atypia; carcinoma shows more significant atypia, pleomorphism, irregular chromatin, often necrosis, and invasive pattern if tissue fragments present)
─ Adenocarcinoma (if glandular papilloma with atypia; carcinoma shows more complex glands, infiltrative features if evaluable, and greater atypia)
─ Adenosquamous carcinoma (if mixed papilloma with atypia; shows features of both SCC and adenocarcinoma)
─ Reactive epithelial changes/metaplasia (may show atypia but usually lack the distinct exophytic papillary architecture if sampled adequately; clinical context of irritation important)
─ Papillary carcinoma metastatic to lung (e g , thyroid, renal, breast; clinical history and site-specific IHC markers are key)
─ Mucoepidermoid carcinoma (if glandular/mucinous features; typically shows intermediate cells and often MAML2 rearrangement)
Prognosis
─ Benign; however, malignant transformation has been reported rarely, most commonly in squamous papillomas (especially in adults with long-standing papillomatosis) to squamous cell carcinoma
─ Recurrence can occur if incompletely excised, particularly for HPV-related multiple papillomas
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Adenocarcinoma (Lung)
A malignant epithelial tumor with glandular differentiation (e g , acini, papillae) or mucin production by tumor cells, representing the most common histologic subtype of lung cancer in many populations
Clinical
─ Most common type of lung cancer, particularly in never-smokers, women, and younger patients
─ Often arises peripherally, but can be central; may present as solitary nodule, multiple nodules, or consolidation
─ Symptoms are variable: cough, dyspnea, hemoptysis, chest pain, or incidental finding; may present with paraneoplastic syndromes or symptoms of metastatic disease
─ Precursor lesions include Atypical Adenomatous Hyperplasia (AAH) and Adenocarcinoma in Situ (AIS); Minimally Invasive Adenocarcinoma (MIA) is an early invasive form
─ Invasive adenocarcinomas are subtyped by predominant histologic pattern (lepidic, acinar, papillary, micropapillary, solid) and include variants like invasive mucinous adenocarcinoma
Cytology
─ Cells are arranged in flat sheets, three-dimensional clusters, acini, papillae with or without fibrovascular cores, or micropapillary tufts; single malignant cells are also common; cellularity is often moderate to high
─ Cytoplasm is usually moderate to abundant, delicate, translucent, finely vacuolated (foamy), or granular; distinct mucin vacuoles (intracytoplasmic or pushing nucleus aside like signet-ring cells) may be present; cell borders can be distinct or ill-defined
─ Nuclei show round to oval or irregular contours; typically enlarged with an increased N:C ratio; chromatin is often finely to moderately granular, sometimes vesicular with parachromatin clearing; nucleoli are usually prominent, often single and central, but can be multiple or irregular; intranuclear pseudoinclusions and nuclear grooves may be seen
─ Background shows may be clean, contain mucin (especially in mucinous subtypes), or show necrosis/inflammatory cells in higher-grade or cavitating tumors; psammoma bodies can be seen with papillary patterns
─ Absence of extensive keratinization (unlike squamous cell carcinoma); absence of prominent nuclear molding and finely stippled "salt & pepper" chromatin with scant cytoplasm (unlike small cell carcinoma); absence of a definite biphasic population with chondromyxoid stroma (unlike hamartoma)
Ancillary studies
─ IHC (+): TTF-1 (most, ~75-85%, except some mucinous/enteric variants), Napsin A (most, similar sensitivity to TTF-1, but more specific for lung primary vs thyroid), CK7, CEA
─ IHC (-): p40, p63 (or only focal/weak), CK5/6 (usually), CK20 (except some mucinous/enteric variants, which can be CK20+ and TTF-1-), CDX2 (except enteric variant), Thyroglobulin, GATA3, Calretinin, WT1
─ Molecular ─ EGFR mutations (common in never-smokers, Asian ethnicity, women, lepidic/papillary patterns), ALK rearrangements (younger patients, never-smokers, solid/signet ring/mucinous patterns), ROS1 rearrangements, KRAS mutations (common in smokers, mucinous patterns), BRAF mutations, MET exon 14 skipping alterations, RET fusions, ERBB2 (HER2) mutations, NTRK fusions, PIK3CA mutations
DDx
─ Reactive bronchial epithelial cells/Creola bodies (cilia often present, less atypia, tight clustering, smooth nuclear contours)
─ Reactive type II pneumocytes (often in background of diffuse lung injury, less architectural complexity, uniform atypia, prominent nucleoli but smooth nuclear membranes)
─ Squamous cell carcinoma, poorly differentiated (p40/p63, CK5/6 positive; TTF-1/Napsin A negative)
─ Large cell neuroendocrine carcinoma (neuroendocrine markers positive, often high mitotic rate, coarser chromatin)
─ Carcinoid tumor (organoid pattern, salt-and-pepper chromatin, neuroendocrine markers positive)
─ Mesothelial cells/Malignant mesothelioma (especially peripheral lesions; mesothelioma is calretinin, WT-1, D2-40 positive, TTF-1/Napsin A negative, MOC31/BerEP4 negative)
─ Metastatic adenocarcinoma (clinical history and site-specific IHC markers: e g , CDX2 for colorectal, PAX8 for gynecologic/renal, GATA3/ER for breast, PSA for prostate)
─ Sclerosing pneumocytoma (dual population of surface cuboidal and stromal round cells, lacks significant atypia)
Prognosis
─ Variable; depends on stage, histologic subtype/grade (e g , micropapillary and solid patterns generally have poorer prognosis), and molecular profile (presence of targetable mutations offers specific therapeutic options)
─ AIS and MIA have excellent prognosis with complete resection
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Squamous Cell Carcinoma (Lung)
Clinical
-Strongly associated with smoking history; more common in men.
-Typically arises centrally in major bronchi, causing cough, hemoptysis, or post-obstructive pneumonia.
-Can also occur peripherally and may cavitate.
-Precursor lesions include squamous dysplasia and carcinoma in situ.
Cytology
-Cells appear as single cells or in irregular, syncytial-like sheets and clusters.
-Well-differentiated tumors show obvious keratinization with dense, refractile, eosinophilic or orangeophilic cytoplasm and bizarre shapes (tadpole, spindle, fiber cells); keratin pearls may be seen.
-Poorly-differentiated tumors show limited or no keratinization, with scant, dense, basophilic or amphophilic cytoplasm and less distinct cell borders.
-Nuclei show marked pleomorphism, hyperchromasia, and irregular, angulated contours; chromatin is coarsely granular or opaque.
-Prominent nucleoli can be seen, especially in poorly-differentiated forms.
-Background often contains a necrotic tumor diathesis, keratinous debris (anucleate squames), and acute inflammation.
Ancillary
-IHC (+): p40 (highly specific), p63, CK5/6, High Molecular Weight Cytokeratins (e.g., 34βE12).
-IHC (-): TTF-1, Napsin A, CK7 (usually), Neuroendocrine markers (Chromogranin, Synaptophysin).
DDx
-Reactive squamous metaplasia/atypia (less pleomorphism, smoother nuclear contours, lacks tumor diathesis).
-Poorly differentiated non-small cell carcinoma (requires IHC for definitive classification).
-Adenocarcinoma (TTF-1/Napsin A positive; may have squamous metaplasia).
-Large cell neuroendocrine carcinoma (positive neuroendocrine markers, prominent nucleoli).
-Small cell carcinoma (finer chromatin, nuclear molding, scant cytoplasm, positive neuroendocrine markers).
-Metastatic squamous cell carcinoma (clinical history is crucial; p16 may be helpful).
-Large cell lymphoma (dispersed single cells, lymphoid markers positive).
-Melanoma (S100/SOX10/Melan-A positive, prominent nucleoli).
Prognosis
-Primarily dependent on stage.
-Poorly differentiated tumors generally have a worse prognosis than well-differentiated tumors of the same stage.
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Neuroendocrine tumor / Carcinoid (Lung)
A relatively low-grade malignant epithelial neoplasm with neuroendocrine differentiation, subdivided histologically into typical carcinoid (low-grade) and atypical carcinoid (intermediate-grade) based on mitotic activity and presence of necrosis
Clinical
─ Epid: Typically adults, mean age 50s, but can occur in adolescence; atypical carcinoids tend to occur in slightly older patients
─ Etio: Typical carcinoids are generally not related to smoking; atypical carcinoids have a stronger association with smoking
─ Site: Central (endobronchial or peribronchial, ~75-80%) > peripheral (intraparenchymal, ~20-25%); atypical carcinoids are more often peripheral
─ Clin: Often asymptomatic (incidental finding); symptomatic cases (especially central) may present with cough, hemoptysis, wheezing, post-obstructive pneumonia; hormonal or paraneoplastic syndromes (e g , carcinoid syndrome, Cushing syndrome) are uncommon with pulmonary carcinoids (<5%)
─ Imaging: Central lesions are often well-defined, round to oval endobronchial nodules or peribronchial masses; Peripheral lesions are typically sharply circumscribed solitary nodules
Cytology
─ Cells are relatively uniform, small to medium-sized, round, oval, or occasionally spindled (especially peripheral tumors); arranged in loose clusters, sheets, trabeculae, acinar structures, pseudorosettes, or as dispersed single cells; cellularity is often high
─ Cytoplasm is scant to moderate, finely granular (eosinophilic with H&E/Pap, grey-blue with Pap, magenta with Giemsa), often with eccentrically placed nuclei giving a plasmacytoid appearance; cell borders are usually indistinct
─ Nuclei show monotonous, round to oval features with smooth contours; chromatin is characteristically finely granular, stippled ("salt and pepper" appearance); nucleoli are typically small and inconspicuous (may be more prominent in atypical carcinoid)
─ Background shows often clean or may contain stripped bare nuclei; branching, thin fibrovascular strands with attached tumor cells may be seen; significant necrosis is absent in typical carcinoid but may be present (usually focal) in atypical carcinoid
─ Absence of extensive nuclear molding, significant crush artifact, or widespread necrosis (unlike small cell carcinoma or LCNEC); absence of high-grade pleomorphism
Ancillary studies
─ IHC (+): Synaptophysin (diffuse), Chromogranin A (often patchy), CD56 (NCAM), Cytokeratins (AE1/AE3, CAM5.2, often dot-like), TTF-1 (positive in ~50-70%, more often in peripheral tumors and atypical carcinoids)
─ IHC (-): p40, p63, Napsin A
─ Note: Ki-67 proliferation index is low in typical carcinoid (<2-5%), higher in atypical carcinoid (up to 20%, but generally <10% by cytology criteria if assessable); mitotic counts are difficult and often not validated for cytologic assessment (<2 mitoses/2mm² and no necrosis for typical; 2-10 mitoses/2mm² OR necrosis for atypical, histologically)
─ Mol: No specific molecular alterations are routinely tested for therapeutic targets in typical/atypical carcinoids
DDx
─ Small cell lung carcinoma (more atypia, nuclear molding, crush artifact, high Ki-67, often scantier cytoplasm, different IHC profile for TTF-1 which is usually strong, and p53 aberrant expression)
─ Large cell neuroendocrine carcinoma (larger cells, more pleomorphism, prominent nucleoli, higher mitotic rate, more necrosis)
─ Adenocarcinoma (glandular structures, mucin, TTF-1/Napsin A positive, neuroendocrine markers negative)
─ Lymphoma/Lymphoid hyperplasia (dispersed lymphoid cells, lymphoglandular bodies, CD45 positive, keratin/neuroendocrine markers negative)
─ Basal cell hyperplasia/Reserve cell hyperplasia (tight clusters, scant cytoplasm, but more regular nuclei and associated with bronchial epithelium, p40 positive)
─ Metastatic neuroendocrine tumor (clinical history, IHC profile may vary e g , CDX2 for GI, PAX8/Islet-1 for pancreatic)
Prognosis
─ Typical carcinoid: Excellent prognosis, >90% 5-year survival; metastases are rare (<15%, usually to regional lymph nodes)
─ Atypical carcinoid: Intermediate prognosis, ~40-70% 5-year survival; higher risk of lymph node and distant metastases (~20-50%)
─ Mitotic counts and necrosis are key prognostic factors but are best assessed on histology
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Small cell neuroendocrine carcinoma (Lung)
A high-grade neuroendocrine carcinoma composed of small cells with scant cytoplasm, finely granular chromatin, absent or inconspicuous nucleoli, and frequent mitoses and necrosis; strongly associated with smoking
Aka ─ Oat cell carcinoma
Clinical
─ Etio: Strongly associated with cigarette smoking (>95% of cases); rarely, may arise as a transformation mechanism of TKI resistance in EGFR-mutated NSCLC
─ Epid: Represents ~13-15% of all lung cancers; incidence has been declining in some regions with decreased smoking rates
─ Site: Typically central, arising from major bronchi, but can be peripheral
─ Clin: Aggressive clinical course, often presents with advanced (metastatic) disease at diagnosis; common sites of metastases include brain, liver, bone, adrenals, contralateral lung; frequently associated with paraneoplastic syndromes (e g , SIADH, Cushing syndrome due to ectopic ACTH, Lambert-Eaton myasthenic syndrome)
─ Imaging: Often large central mass with extensive mediastinal/hilar lymphadenopathy; peripheral nodules less common
Cytology
─ Cells are small (typically 2-3 times the size of a mature lymphocyte), round, oval, or spindled, often arranged in loose clusters, sheets, linear arrays (Indian filing), or as dispersed single cells; nuclear molding is a characteristic feature in cell groups; crush artifact is common
─ Cytoplasm is very scant, often appearing as a thin rim or inapparent, leading to high N:C ratios and "naked nuclei" appearance
─ Nuclei show round to oval or angulated/irregular contours; chromatin is finely granular ("salt and pepper") to coarsely granular or smudged/pyknotic, especially in degenerated cells or due to crush artifact; nucleoli are usually absent or inconspicuous, if present they are small
─ Background shows often necrotic (tumor diathesis), with granular debris and apoptotic bodies; Azzopardi phenomenon (basophilic staining of vascular walls by DNA from necrotic tumor cells) may be seen
─ Absence of prominent nucleoli, abundant cytoplasm, or distinct glandular/squamous differentiation (though combined SCLC with NSCLC components can occur)
Ancillary studies
─ IHC (+): Synaptophysin, Chromogranin A (often focal), CD56 (NCAM), TTF-1 (most cases, ~85-90%), Cytokeratins (AE1/AE3, CAM5.2, often with a perinuclear dot-like pattern); Ki-67 proliferation index is very high (typically >70-80%, often approaching 100%); aberrant p53 expression (overexpression or null pattern) is common
─ IHC (-): p40, p63 (or only rare scattered positive cells), Napsin A, CD45 (LCA), S100 protein
─ Mol: RB1 inactivation (mutation or deletion) and TP53 mutations are nearly ubiquitous; other alterations (e g , MYC family amplification, CREBBP/EP300 mutations) are common but not currently used for routine targeted therapy decisions
DDx
─ Carcinoid tumor (more cytoplasm, more organoid patterns, less atypia, no/rare molding, lower Ki-67)
─ Large cell neuroendocrine carcinoma (larger cells, more cytoplasm, often prominent nucleoli)
─ Basaloid squamous cell carcinoma (more cohesive, peripheral palisading, p40/p63 positive, neuroendocrine markers negative)
─ Lymphoma (dispersed cells, lymphoglandular bodies, CD45 positive, keratin/neuroendocrine markers negative)
─ Reserve cell hyperplasia (tight cohesive clusters, associated with bronchial cells, lacks necrosis and high Ki-67)
─ Crushed benign bronchial cells or lymphocytes (can mimic SCLC, but benign cells lack true atypia and high Ki-67; lymphocytes CD45+)
─ Metastatic small cell carcinoma (from other sites like prostate, bladder, cervix; clinical history and IHC for site-specific markers if applicable, e g , PSA for prostate)
Prognosis
─ Very poor prognosis, especially when presenting with extensive-stage disease (most common); highly sensitive to initial chemotherapy and radiation, but recurrence is common and rapid
─ Median survival for extensive stage is ~8-12 months, for limited stage ~15-20 months with treatment
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Large cell neuroendocrine carcinoma (LCNEC) (Lung)
A high-grade neuroendocrine carcinoma morphologically resembling non-small cell carcinoma (large cells, moderate/abundant cytoplasm, often prominent nucleoli) but showing histologic evidence of neuroendocrine differentiation (organoid nesting, trabecular growth, rosettes, peripheral palisading) and immunohistochemical expression of neuroendocrine markers
Clinical
─ Rare, accounts for ~1-3% of all lung cancers
─ Strongly associated with smoking, predominantly affects older males
─ Site: More often peripheral than central, but can occur in either location; rarely involves main airways
─ Clin: Aggressive behavior, similar to or worse than SCLC; most are inoperable at diagnosis due to advanced stage or metastases
─ Imaging: Often presents as a large peripheral mass with irregular tumor borders and expansive growth; mediastinal lymphadenopathy is common
Cytology
─ Cells are large (typically >3 times the size of a lymphocyte), polygonal or pleomorphic, arranged in loose clusters, syncytial sheets, or as single cells; neuroendocrine architectural features like rosettes or peripheral palisading may be subtle or focal in cytology
─ Cytoplasm is moderate to abundant, often granular or eosinophilic; cell borders may be distinct or ill-defined
─ Nuclei show large, irregular, often vesicular features with coarse to clumped chromatin; nucleoli are frequently prominent and can be large; subtle nuclear molding may be present in some clusters
─ Background shows prominent necrosis (tumor diathesis) is common; mitotic figures, including atypical ones, are often readily identifiable
─ Absence of extensive keratinization or definitive glandular structures (though focal mucin or squamous differentiation can occur in combined forms); differs from SCLC by larger cell size, more cytoplasm, and prominent nucleoli
Ancillary studies
─ IHC (+): At least one neuroendocrine marker (Synaptophysin, Chromogranin A, CD56) must be positive (often diffuse Synaptophysin, Chromogranin may be focal); Cytokeratins (AE1/AE3, CAM5.2) are positive; TTF-1 is positive in ~40-60% of cases; Ki-67 proliferation index is high (typically >40-50%, often >70%)
─ IHC (-): p40, p63 (usually, unless combined with SCC), Napsin A (usually, unless combined with adenocarcinoma)
─ Mol: Molecular profile can be heterogeneous, some resembling SCLC (RB1/TP53 mutations), others more like NSCLC (KRAS, STK11/LKB1 mutations); no specific targetable alterations define LCNEC as a group for routine therapy
DDx
─ Poorly differentiated non-small cell carcinoma (adenocarcinoma or squamous cell carcinoma lacking neuroendocrine markers)
─ Small cell lung carcinoma (smaller cells, scant cytoplasm, finer chromatin, inconspicuous nucleoli, though some overlap exists, especially with "intermediate cell" SCLC)
─ Carcinoid tumor, atypical (less atypia, lower Ki-67, usually more organized architecture)
─ Metastatic large cell neuroendocrine carcinoma (from other sites like GI tract; clinical history and IHC for site-specific markers if applicable)
─ Melanoma (S100, SOX10, Melan-A/HMB45 positive, neuroendocrine markers negative)
─ Basaloid squamous cell carcinoma (p40/p63 positive, neuroendocrine markers negative)
Prognosis
─ Poor prognosis, similar to or worse than SCLC, with high rates of recurrence and metastasis even after resection of early-stage disease
─ Optimal treatment strategies are still evolving, often treated similarly to SCLC or high-grade NSCLC depending on institutional protocols and molecular features if known
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Lymphomas (Lung)
Malignant neoplasms of lymphoid cells that can involve the lung either as a primary site (rare) or more commonly as secondary involvement from a systemic lymphoma. Primary pulmonary lymphomas are most often low-grade B-cell lymphomas of MALT type.
Clinical
─ Primary pulmonary lymphoma (PPL) is rare, <1% of all lymphomas and <0.5% of primary lung malignancies
─ Secondary lung involvement by lymphoma is more common (up to 50% of non-Hodgkin and Hodgkin lymphoma patients)
─ PPLs: Most common are extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (MALT lymphoma), followed by diffuse large B-cell lymphoma (DLBCL); primary pulmonary Hodgkin lymphoma is very rare
─ Symptoms: Can be asymptomatic (incidental finding); or present with cough, dyspnea, chest pain, B symptoms (fever, night sweats, weight loss)
─ Imaging: Variable; solitary nodule, multiple nodules, consolidation, diffuse interstitial infiltrates, or pleural effusion
Cyology ─
─ Cells are predominantly a dispersed population of lymphoid cells; cellularity varies from low to high; architectural patterns (e g , follicular, diffuse) are difficult to assess on cytology alone, but cohesive clusters are generally absent (unlike carcinoma)
─ Cytoplasm is typically scant in small cell lymphomas, more abundant in large cell lymphomas; may be pale, basophilic, or clear; lymphoglandular bodies (cytoplasmic fragments) may be seen in the background, especially with Giemsa stain
─ Nuclei show features dependent on lymphoma type:
─ Low-grade (e g , MALT lymphoma, CLL/SLL): Small, round to slightly irregular nuclei, coarse or condensed chromatin, inconspicuous nucleoli
─ High-grade (e g , DLBCL, Burkitt): Large nuclei, vesicular or coarse chromatin, prominent nucleoli (DLBCL) or multiple small nucleoli (Burkitt), irregular nuclear contours
─ Hodgkin lymphoma: Presence of classic Reed-Sternberg cells and their mononuclear variants (Hodgkin cells) in a mixed inflammatory background containing eosinophils, plasma cells, histiocytes, and small lymphocytes
─ Background shows often a dispersed, monotonous population of lymphoid cells; necrosis and karyorrhectic debris can be prominent in high-grade lymphomas (e g , Burkitt, some DLBCL); reactive elements (macrophages, bronchial cells) may be admixed
─ Absence of true epithelial cohesion, keratinization, or glandular formation (unlike carcinoma); absence of "salt & pepper" chromatin with nuclear molding (unlike small cell carcinoma, though some lymphomas can show molding)
Ancillary studies
─ Note: Flow cytometry on fresh/unfixed sample is highly valuable for immunophenotyping and clonality assessment; Cell block for IHC is crucial if flow cytometry is not feasible or for specific markers not amenable to flow (e g , some nuclear transcription factors, EBV-EBER ISH)
─ IHC (+): CD45 (pan-leukocyte marker, confirms hematopoietic origin); B-cell lymphomas: CD20, CD19, PAX5, CD79a; T-cell lymphomas: CD3, CD2, CD5, CD7; Hodgkin lymphoma: CD30, CD15 (classic HL), PAX5 (weak in RS cells), CD20 (LP cells in NLPHL)
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2), TTF-1, Napsin A, neuroendocrine markers (in most lymphomas, helps exclude carcinoma)
─ Mol: Clonality studies (e g , IgH/IgK/IgL gene rearrangements for B-cell, TCR gene rearrangements for T-cell lymphomas by PCR) can confirm neoplasia if morphologically equivocal; specific translocations by FISH or RT-PCR (e g , t(14,18) for follicular lymphoma, t(11,14) for mantle cell, MYC rearrangements for Burkitt/high-grade B-cell lymphoma)
DDx
─ Reactive lymphoid hyperplasia/Lymphoid interstitial pneumonia (LIP) (polymorphous lymphoid population, no light chain restriction by flow/IHC, often germinal center fragments)
─ Small cell lung carcinoma (nuclear molding, crush artifact, "salt & pepper" chromatin, neuroendocrine markers positive, CD45 negative)
─ Poorly differentiated non-small cell carcinoma (may show dispersed cells but usually some cohesion, keratin or TTF-1/Napsin A positive, CD45 negative)
─ Carcinoid tumor (organoid clusters, "salt & pepper" chromatin, neuroendocrine markers positive, CD45 negative)
─ Thymoma (if mediastinal; mixture of epithelial cells and lymphocytes, epithelial cells CK positive)
─ Chronic inflammation with atypical lymphocytes (may require flow cytometry/molecular to exclude lymphoma)
Prognosis
─ Highly variable, depends on specific lymphoma subtype, grade, stage, and patient factors
─ Primary pulmonary MALT lymphoma often has an indolent course
─ High-grade lymphomas like DLBCL and secondary lung involvement by aggressive systemic lymphomas have a poorer prognosis
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Pulmonary Langerhans cell histiocytosis (PLCH)
A rare, smoking-related interstitial lung disease characterized by the proliferation and accumulation of Langerhans cells, typically forming nodular or cystic lesions predominantly in the upper lobes of young adult smokers
Clinical
─ Epid: Almost exclusively occurs in young adult cigarette smokers (90-100% of cases); mean age 20-40 years; slight male predominance or equal sex distribution
─ Site: Lungs are the primary site; can be isolated to lungs or part of multisystem LCH (rare in adults)
─ Clin: Variable presentation; up to 25% asymptomatic (incidental finding); symptomatic patients may have nonproductive cough, dyspnea, chest pain, fatigue, weight loss; spontaneous pneumothorax occurs in ~10-20%
─ Imaging: Characteristic findings include bilateral, often symmetric, nodules and cysts, predominantly in the mid and upper lung zones, with sparing of costophrenic angles; cysts may be bizarrely shaped
─ Note: Smoking cessation is key to management and may lead to regression or stabilization in many cases
Cytology
(Usually diagnosed by BAL or transbronchial/surgical biopsy; FNA is less common)
─ Cells are Langerhans cells, which are large histiocytoid cells, often seen singly or in loose aggregates, admixed with other inflammatory cells, especially eosinophils and pigmented macrophages
─ Cytoplasm is abundant, pale, eosinophilic, and often finely granular or vacuolated; cell borders may be distinct or ill-defined
─ Nuclei show characteristic features: oval, elongated, or indented ("coffee-bean" shaped) with delicate nuclear membranes, fine, pale chromatin, and often prominent longitudinal grooves; nucleoli are usually inconspicuous
─ Background shows a mixed inflammatory infiltrate including eosinophils (can be numerous), lymphocytes, neutrophils, and pigmented alveolar macrophages (smoker's macrophages); cellular debris may be present; Charcot-Leyden crystals may be seen if eosinophils are abundant
─ Absence of overt malignant features; absence of granulomas (unlike sarcoidosis or infection); absence of extensive fibrosis in early lesions (though end-stage PLCH is fibrotic)
Ancillary studies
─ IHC (+): Langerhans cells are positive for CD1a (membranous), S100 protein (nuclear and cytoplasmic), and Langerin (CD207, cytoplasmic, highly specific)
─ IHC (-): CD68 may be positive but is nonspecific (stains macrophages as well)
─ Note: Ultrastructurally, Birbeck granules (tennis-racket shaped cytoplasmic organelles) are pathognomonic but EM is rarely performed for diagnosis
─ Mol: BRAF V600E mutations are found in ~40-50% of PLCH cases, suggesting a neoplastic component for at least a subset
DDx
─ Eosinophilic pneumonia (numerous eosinophils but lacks the characteristic Langerhans cells)
─ Reactive histiocytic proliferations (macrophages lack the specific nuclear features and IHC profile of Langerhans cells)
─ Infections (especially fungal or mycobacterial if granulomatous features are present, but LCH is not typically granulomatous)
─ Other interstitial lung diseases with eosinophilia
─ Poorly differentiated carcinoma or melanoma (if Langerhans cells are pleomorphic; IHC is crucial)
─ Lymphoma (especially Hodgkin lymphoma if eosinophils are prominent; RS cells have different morphology and IHC)
Prognosis
─ Variable; smoking cessation is the most important factor and leads to improvement or stabilization in many patients
─ Some progress to irreversible pulmonary fibrosis and respiratory failure
─ Risk of developing other smoking-related malignancies is increased
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Mesotheliomas (Lung)
A malignant neoplasm arising from mesothelial cells lining the pleura, peritoneum, pericardium, or tunica vaginalis; pleural mesothelioma is the most common form and is strongly associated with asbestos exposure. Cytologic diagnosis is often made on pleural fluid, but FNA of pleural-based masses can also be performed.
Clinical
─ Epid: Strong association with asbestos exposure (all types, especially crocidolite); long latency period (typically 20-40+ years)
─ Site: Pleura (most common, ~80%), peritoneum (~15-20%), pericardium (rare), tunica vaginalis (rare)
─ Clin: Often presents with dyspnea, non-pleuritic chest pain, weight loss; unilateral pleural effusion is common; imaging shows pleural thickening, effusion, or discrete pleural masses
─ Note: Histologically classified into epithelioid (most common, ~60-70%), sarcomatoid (~10-20%), and biphasic (mixed, ~10-20%) types; epithelioid and biphasic types are more likely to exfoliate cells into effusions or be sampled by FNA
Cytology
(Features primarily describe epithelioid mesothelioma in pleural fluid or FNA of pleural mass)
─ Cells are large, epithelioid, appearing singly, in loose clusters, or in characteristic large, cohesive, three-dimensional, knobby, morula-like clusters (often >12 cells); papillary structures may be seen; "cell-embracing" (one cell wrapping around another) and intercellular "windows" (slit-like spaces between cells) are common features
─ Cytoplasm is typically abundant, dense, and often has a two-tone appearance (dense endoplasm, paler ectoplasm or "lacy skirt"); may be eosinophilic, basophilic, or amphophilic; vacuolization can occur but usually does not indent the nucleus significantly (unlike adenocarcinoma signet rings)
─ Nuclei show round to oval features, often centrally located (but can be eccentric), with smooth to slightly irregular nuclear membranes; chromatin is vesicular or finely granular; nucleoli are usually prominent and can be large, but typically single and round
─ Background shows may be hemorrhagic or contain inflammatory cells; hyaluronic acid may be present (stains with Alcian blue at pH 2.5, PAS-D negative, and can sometimes be seen as a "wispy" or "feathery" precipitate or within cytoplasmic vacuoles)
─ Absence of extensive keratinization (unlike squamous cell carcinoma); absence of overt, large, single intracytoplasmic mucin vacuoles indenting the nucleus (unlike adenocarcinoma); absence of delicate "salt & pepper" chromatin (unlike neuroendocrine tumors)
Ancillary studies
─ Note: A panel of IHC stains is essential to distinguish mesothelioma from adenocarcinoma, its main differential. At least two mesothelial markers and two carcinoma markers are recommended.
─ IHC (+): Calretinin (nuclear and cytoplasmic), WT1 (nuclear), CK5/6 (cytoplasmic), D2-40 (podoplanin, membranous), EMA (epithelial membrane antigen, often thick membranous "rind-like" staining); BAP1 loss (nuclear staining absent in tumor cells, present in internal controls like lymphocytes/stroma) is a strong indicator of malignancy in mesothelial proliferations
─ IHC (-): CEA (monoclonal), MOC31, Ber-EP4, TTF-1, Napsin A, Claudin-4 (these are typically positive in adenocarcinoma)
─ Mol: Homozygous deletion of CDKN2A (p16) by FISH can support malignancy in equivocal cases; BAP1 gene mutations are common
DDx
─ Adenocarcinoma, metastatic to pleura or primary lung adenocarcinoma involving pleura (key differential; adenocarcinomas are typically calretinin, WT1, CK5/6, D2-40 negative, and positive for CEA, MOC31, Ber-EP4, Claudin-4; TTF-1/Napsin A positive for lung primary)
─ Reactive mesothelial hyperplasia (cells are usually less atypical, form smaller, flatter sheets, lack BAP1 loss or p16 deletion; can be very difficult to distinguish from well-differentiated mesothelioma on morphology alone, especially in limited samples; clinical context and imaging crucial)
─ Squamous cell carcinoma, poorly differentiated (p40/p63 positive, mesothelial markers negative)
─ Synovial sarcoma, epithelioid variant (rare in pleura, TLE1 positive, specific translocations)
Prognosis
─ Generally poor, especially for sarcomatoid and biphasic types; median survival for epithelioid mesothelioma is ~12-18 months
─ BAP1 loss may be associated with a somewhat better prognosis in some studies, but this is complex
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Paraganglioma (Lung)
Rare neuroendocrine neoplasms arising from paraganglia of the autonomic nervous system, which are derived from neural crest cells. Thoracic paragangliomas are uncommon, usually located in the posterior mediastinum (aortosympathetic chain) or middle mediastinum (aortopulmonary paraganglia, visceral-autonomic paraganglia related to heart/great vessels).
Clinical
─ Site: Most common in head and neck (e g , carotid body, jugulotympanic, vagal); intrathoracic paragangliomas are rare, typically posterior or middle mediastinum; primary intrapulmonary paragangliomas are exceptionally rare
─ Clin: Usually benign, slow-growing masses; may be asymptomatic or cause symptoms due to mass effect; a subset (~1-3% overall, higher for some specific sites like organ of Zuckerkandl) are functional, secreting catecholamines (epinephrine, norepinephrine), leading to hypertension, palpitations, headache, sweating (pheochromocytoma-like syndrome)
─ Epid: Can occur at any age, peak in 4th-5th decades; familial syndromes (e g , mutations in SDHx genes, VHL, RET, NF1) account for ~30-40% of cases
─ Imaging: Typically well-circumscribed, highly vascular masses on CT/MRI; may show intense uptake on 123I-MIBG or 68Ga-DOTATATE PET/CT
Cytology
(FNA is often performed for mediastinal or other accessible masses)
─ Cells are polygonal to epithelioid, sometimes spindled or plasmacytoid, arranged in cohesive clusters (characteristic "Zellballen" or nested/alveolar pattern with cells grouped by a rich capillary network), trabeculae, or as dispersed single cells; cellularity can be moderate to high
─ Cytoplasm is typically moderate to abundant, finely granular (eosinophilic or amphophilic), often with ill-defined cell borders; red cytoplasmic granules may be seen with Giemsa ("NE granules"); clear or oncocytic change can occur
─ Nuclei show round to oval features, often with "salt-and-pepper" (stippled) neuroendocrine chromatin; nucleoli may be inconspicuous or small and distinct; significant anisonucleosis (variation in nuclear size) can be present even in benign lesions and is not a reliable sign of malignancy; intranuclear pseudoinclusions may be seen
─ Background shows often hemorrhagic due to high vascularity; fragments of delicate fibrovascular stroma (capillary network) are characteristic, often entwining cell clusters; sustentacular cells (spindle-shaped, S100-positive supporting cells) may be present at the periphery of Zellballen, but are often difficult to identify on cytology alone
─ Absence of extensive necrosis, high mitotic activity (mitoses are rare in benign cases), or definitive features of carcinomatous differentiation (e g , keratin pearls, true glands)
Ancillary studies
─ IHC (+): Chief cells (tumor cells) are positive for neuroendocrine markers: Synaptophysin (diffuse), Chromogranin A (often strong), CD56 (NCAM); Neuron-specific enolase (NSE); Sustentacular cells are positive for S100 protein and SOX10 (highlighting the periphery of Zellballen if present and sampled)
─ IHC (-): Chief cells are negative for Cytokeratins (AE1/AE3, CAM5.2 usually, though focal/dot-like positivity can occur, especially in FNA material or with broad-spectrum keratins), TTF-1, Napsin A, PAX8 (except some bladder/renal paragangliomas)
─ Note: Ki-67 index is typically low (<3%) in benign paragangliomas; higher rates may suggest aggressive potential but are not definitive for malignancy
─ Mol: Germline testing for SDHx, VHL, RET, NF1 mutations is recommended, especially in younger patients, multiple tumors, or family history
DDx
─ Carcinoid tumor (pulmonary or metastatic; also neuroendocrine, but typically more cohesive, less vascular stroma, often TTF-1 positive if pulmonary primary, lacks prominent sustentacular cells)
─ Medullary thyroid carcinoma, metastatic (calcitonin positive, CEA positive, may have amyloid, different clinical context)
─ Melanoma, metastatic (S100, SOX10, Melan-A/HMB45 positive, neuroendocrine markers negative, often prominent nucleoli, can have plasmacytoid/spindled cells)
─ Alveolar soft part sarcoma (rare, ASPSCR1-TFE3 fusion, characteristic PAS-D positive crystals, different IHC profile)
─ Neuroendocrine carcinoma, high-grade (e g , SCLC, LCNEC; show much greater atypia, mitoses, necrosis, higher Ki-67)
─ Hyalinizing trabecular tumor of thyroid, metastatic (rare, distinct nuclear features, thyroglobulin positive)
─ Clear cell renal cell carcinoma, metastatic (if clear cell change in paraganglioma; RCC is PAX8, CD10, RCCma positive)
Prognosis
─ Most paragangliomas are benign and cured by complete surgical excision
─ Malignancy is defined by the presence of metastases (to sites where paraganglionic tissue is normally absent, e g , lymph nodes, liver, bone, lung); occurs in ~5-15% of cases overall, higher for extra-adrenal abdominal and some familial tumors
─ Histologic features (e g , size, necrosis, vascular invasion, mitotic activity, Ki-67) can suggest increased risk of malignancy, but no single criterion is definitive; SDHB mutations are associated with higher risk of malignancy and metastases
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Thymomas
A neoplasm of thymic epithelial cells, typically arising in the anterior mediastinum, characterized by a variable admixture of neoplastic epithelial cells and non-neoplastic lymphocytes (thymocytes). Cytologic diagnosis is usually by FNA of a mediastinal mass.
Clinical
─ Epid: Most common primary tumor of the anterior mediastinum in adults (20-30% of mediastinal tumors); rare in children
─ Site: Anterior mediastinum (90%); rarely ectopic in neck, posterior mediastinum, or lung (primary pulmonary thymoma)
─ Clin: ~30-50% are asymptomatic (incidental finding); symptomatic patients may have chest pain, cough, dyspnea, superior vena cava syndrome; strongly associated with paraneoplastic syndromes, especially myasthenia gravis (MG, in ~30-50% of thymoma patients), pure red cell aplasia, hypogammaglobulinemia (Good syndrome)
─ Imaging: Typically a well-circumscribed, lobulated anterior mediastinal mass; calcification or cystic change may be present
─ WHO Classification: Based on epithelial cell morphology and lymphocyte-to-epithelial cell ratio (Type A, AB, B1, B2, B3, and rare other types including thymic carcinoma); this classification has prognostic and clinical relevance but is difficult to apply precisely on cytology alone
Cytology
─ Cells are a characteristic dual population of (1) neoplastic epithelial cells and (2) non-neoplastic lymphocytes (immature T-lymphocytes/thymocytes); the proportion of these two components varies greatly depending on the thymoma subtype and sampling
─ Epithelial cells: Can be spindle-shaped (Type A, AB), polygonal/epithelioid with bland, oval nuclei and inconspicuous nucleoli (Type B1, B2), or more atypical with prominent nucleoli and irregular contours (Type B3, thymic carcinoma); often seen in cohesive clusters or singly
─ Lymphocytes: Typically small, mature-appearing lymphocytes with scant cytoplasm, round nuclei, and condensed chromatin; may be very numerous, obscuring epithelial cells (especially in Type B1 and B2, "lymphocyte-rich" thymomas) or sparse (Type A, B3, "lymphocyte-poor" thymomas)
─ Cytoplasm of epithelial cells: Scant to moderate, pale, eosinophilic, or clear; spindle cells have wispy cytoplasm; epithelioid cells have more defined cytoplasm
─ Nuclei of epithelial cells:
─ Type A: Bland, oval to spindle, fine chromatin, inconspicuous nucleoli
─ Type AB: Mix of Type A areas and lymphocyte-rich areas
─ Type B1: Resemble normal thymus; epithelial cells are scattered, bland, with vesicular nuclei and small nucleoli, among predominant lymphocytes
─ Type B2: Epithelial cells more numerous, in clusters, round to polygonal, vesicular nuclei, distinct nucleoli
─ Type B3: Epithelial cells predominate, sheets of polygonal cells with mild to moderate atypia, vesicular nuclei, prominent nucleoli
─ Thymic Carcinoma: Overtly malignant epithelial cells, marked pleomorphism, large irregular nuclei, coarse chromatin, macronucleoli (see separate entry if needed)
─ Background shows often clean or bloody; cystic fluid may be aspirated if cystic degeneration is present; Hassall's corpuscles are rare on cytology but specific if seen
─ Absence of significant keratinization (unlike SCC), true glandular formation (unlike adenocarcinoma), or Reed-Sternberg cells (unlike Hodgkin lymphoma)
Ancillary studies
─ IHC (+): Epithelial cells are positive for cytokeratins (AE1/AE3, CAM5.2, CK5/6, CK7, CK19), p63, p40; Lymphocytes (thymocytes) are T-cells, positive for TdT (terminal deoxynucleotidyl transferase), CD3, CD1a, CD4, CD8 (often double positive)
─ IHC (-): Epithelial cells are negative for CD45 (LCA), neuroendocrine markers (usually), S100 (usually), CD20; Lymphocytes are negative for B-cell markers (CD20, PAX5 usually)
─ Note: Flow cytometry can confirm the immature T-cell phenotype of the lymphocytes (TdT+, CD4+/CD8+ double positive, expression of CD1a)
DDx
─ Lymphoma (especially T-lymphoblastic lymphoma, Hodgkin lymphoma): T-LBL has blasts with fine chromatin, high N:C, TdT+, but usually more atypia and lacks the cohesive epithelial clusters of thymoma; Hodgkin lymphoma has Reed-Sternberg cells and a different inflammatory background, epithelial cells are absent
─ Germ cell tumor (e g , seminoma): Seminoma cells are large, dispersed, with clear cytoplasm, prominent nucleoli, tigroid background, PLAP/OCT3/4/SALL4 positive; epithelial cells of thymoma are CK positive
─ Metastatic carcinoma: Clinical history, IHC for site-specific markers (e g , TTF-1 for lung, GATA3 for breast)
─ Carcinoid tumor/Neuroendocrine carcinoma of thymus: Neuroendocrine markers positive, different morphology
─ Benign thymic hyperplasia/Normal thymus (especially in children/young adults): Similar dual population, but often more lobulated architecture histologically, less distinct mass on imaging; cytology may be indistinguishable from Type B1 thymoma
Prognosis
─ Generally good for encapsulated, non-invasive thymomas (WHO Types A, AB, B1, B2), especially after complete surgical resection
─ Type B3 thymoma has a higher risk of recurrence and aggressive behavior
─ Thymic carcinomas have a much poorer prognosis
─ Presence of myasthenia gravis does not significantly impact overall survival related to the thymoma itself
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Salivary gland-type carcinomas (primary in lung/mediastinum)
Rare primary tumors of the lung or mediastinum that histologically resemble salivary gland carcinomas, such as adenoid cystic carcinoma and mucoepidermoid carcinoma. They are thought to arise from submucosal bronchial glands or minor salivary gland rests.
Adenoid Cystic Carcinoma (ACC)
Clinical
─ Rare primary lung/tracheobronchial tumor (<0.2% of lung cancers); more common in trachea and main bronchi than peripherally
─ Clin: Often slow-growing but relentlessly infiltrative with a high propensity for perineural invasion; presents with cough, dyspnea, hemoptysis, or post-obstructive symptoms; long-term prognosis is poor despite slow growth, due to local recurrences and late distant metastases
Cytology
─ Cells are small, basaloid, with scant cytoplasm, hyperchromatic nuclei, and inconspicuous nucleoli; arranged in characteristic three-dimensional spherical or branching ("glove-finger") clusters surrounding acellular, hyaline, metachromatic (magenta on Giemsa, pale blue/gray on Pap) globules or cylinders of basement membrane material
─ Cytoplasm is scant, poorly defined
─ Nuclei show round to oval, relatively uniform features with dark, finely granular chromatin; molding may be seen; nucleoli are typically inconspicuous
─ Background shows often clean, but may have some of the hyaline globules dispersed; necrosis is uncommon unless high-grade transformation
─ Absence of significant pleomorphism, keratinization, or glandular mucin
Ancillary studies
─ IHC (+): CK7, CAM5.2, p63, p40 (basal/myoepithelial cells), c-Kit (CD117), SOX10; MYB overexpression is common due to MYB-NFIB fusion
─ IHC (-): TTF-1, Napsin A, neuroendocrine markers
─ Mol: MYB-NFIB fusion gene is characteristic
DDx
─ Small cell carcinoma (more atypia, molding, crush, neuroendocrine markers+, MYB-)
─ Basaloid squamous cell carcinoma (p40/p63+, but lacks hyaline globules and MYB fusion)
─ Carcinoid tumor (organoid, salt-and-pepper chromatin, neuroendocrine markers+)
─ Pleomorphic adenoma (if basaloid with stromal spheres; PA has fibrillary chondromyxoid stroma, more myoepithelial cell heterogeneity)
Prognosis
─ Indolent but relentless course; high rates of local recurrence and late distant metastases (lung, bone, brain); 5-year survival ~60-80%, but 10-15 year survival is much lower
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Adenosquamous carcinoma (Lung)
A carcinoma showing components of both squamous cell carcinoma (SCC) and adenocarcinoma (ADC), with each component constituting at least 10% of the tumor. It is considered a subtype of non-small cell lung carcinoma (NSCLC).
Clinical
─ Rare, accounts for ~0.4-4% of NSCLCs
─ Strong association with smoking, similar to SCC and ADC
─ Site: Can be central or peripheral
─ Clin: Symptoms similar to other NSCLCs (cough, dyspnea, hemoptysis, chest pain)
─ Imaging: May appear as a cavitating mass (like SCC) or a peripheral nodule/mass (like ADC)
Cytology
─ Cells are a mixture of two distinct malignant populations:
1. Squamous component: Cells with features of SCC (keratinization, dense cytoplasm, intercellular bridges if visible, bizarre shapes, hyperchromatic, irregular nuclei)
2. Glandular component: Cells with features of ADC (gland formation, acini, papillae, mucin production, vesicular nuclei, prominent nucleoli)
─ Cytoplasm is dimorphic: dense/keratinized in SCC component, vacuolated/mucinous in ADC component
─ Nuclei show features of both SCC (hyperchromatic, irregular, pyknotic) and ADC (vesicular, prominent nucleoli)
─ Background shows may have features of both (keratinous debris and/or mucin, tumor diathesis)
─ Absence of a pure population of either SCC or ADC; both components must be clearly identifiable and malignant
Ancillary studies
─ Note: Diagnosis often relies on identifying both components morphologically. IHC can support if one component is poorly differentiated.
─ IHC (+): Squamous component: p40, p63, CK5/6; Glandular component: TTF-1, Napsin A, CK7, CEA, mucin stains
─ IHC (-): Markers for one component should be negative in the other (e g , TTF-1 negative in pure SCC component)
─ Mol: Molecular profile can be heterogeneous, sometimes showing alterations typical of ADC (e g , EGFR, KRAS) or less commonly SCC; some studies suggest EGFR mutations are more frequent than in pure SCC
DDx
─ Squamous cell carcinoma with reactive glandular changes or entrapped benign glands (glandular component is benign)
─ Adenocarcinoma with squamous metaplasia (squamous component is metaplastic, not overtly malignant; p40/p63 may be positive in metaplastic cells but atypia is less)
─ Mucoepidermoid carcinoma (another biphasic tumor with squamous and mucinous/glandular cells, but also has intermediate cells, often arises endobronchially, and may have MAML2 rearrangement)
─ Collision tumor (rare, two separate primary tumors colliding; components are usually more geographically distinct)
─ Poorly differentiated NSCLC-NOS (if both components are poorly differentiated and specific features are hard to discern without IHC)
Prognosis
─ Generally considered to have a poor prognosis, possibly worse than pure ADC or SCC of similar stage, but data are somewhat conflicting and depend on the proportion and grade of each component
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Pleomorphic carcinoma (Lung)
A poorly differentiated non-small cell lung carcinoma (NSCLC), usually squamous cell carcinoma, adenocarcinoma, or large cell carcinoma, that contains at least 10% spindle cells and/or giant cells. It is a subtype of sarcomatoid carcinoma of the lung.
Clinical
─ Rare, accounts for ~0.1-0.4% of all lung malignancies
─ Strong association with heavy smoking; predominantly affects elderly males
─ Site: Typically peripheral, often large and cavitating
─ Clin: Aggressive clinical course, often presents with advanced stage, symptoms of chest pain, cough, dyspnea, hemoptysis; rapid growth and early metastasis are common
─ Imaging: Large peripheral mass, often with necrosis and cavitation; may invade chest wall or mediastinum
Cytology
─ Cells are highly pleomorphic, showing a mixture of (1) recognizable NSCLC component (squamous, adeno, or large cell) and (2) a component of malignant spindle cells and/or bizarre, multinucleated or mononuclear giant cells; the spindle/giant cell component must be at least 10%
─ Cytoplasm is variable: epithelial component may show keratinization or mucin; spindle cells have elongated, wispy cytoplasm; giant cells have abundant, often dense or vacuolated cytoplasm
─ Nuclei show extreme pleomorphism, anisonucleosis, hyperchromasia, irregular chromatin, and prominent, often irregular nucleoli in both epithelial and spindle/giant cell components; "monster" cells are common
─ Background shows often necrotic (tumor diathesis), hemorrhagic, and may contain inflammatory cells
─ Absence of a pure sarcoma (an epithelial component must be present or demonstrable by IHC); absence of features of small cell carcinoma or typical carcinoid
Ancillary studies
─ IHC (+): Epithelial component: Cytokeratins (AE1/AE3, CAM5.2), EMA; specific markers depending on NSCLC type (e g , p40 for squamous, TTF-1 for adeno); Spindle/giant cell component: Often positive for Vimentin, may co-express cytokeratins (confirming carcinomatous nature), but can be CK negative in some areas
─ IHC (-): Spindle/giant cell component is usually negative for specific sarcoma markers (e g , Desmin, Myogenin, S100, CD34, unless divergent differentiation occurs, which is rare) and lymphoid/melanoma markers
─ Mol: KRAS mutations are common; EGFR/ALK alterations are rare; PD-L1 expression can be high in some cases
DDx
─ Metastatic sarcoma with entrapped benign epithelium (sarcoma cells are CK negative, clinical history of sarcoma elsewhere)
─ Metastatic pleomorphic carcinoma from another site (e g , pancreas, thyroid anaplastic; clinical history and site-specific markers if any)
─ Melanoma, pleomorphic/spindle cell type (S100, SOX10, Melan-A/HMB45 positive)
─ True primary pulmonary sarcoma (very rare, lacks epithelial component, specific sarcoma markers may be positive)
─ Poorly differentiated NSCLC without overt spindle/giant cells (distinction can be subtle if spindle/giant cells are focal or poorly sampled)
─ Reactive atypia with bizarre stromal cells (e g , post-radiation/chemotherapy, organizing pneumonia; clinical context, less diffuse atypia in stromal cells)
Prognosis
─ Very poor prognosis, one of the most aggressive subtypes of lung cancer; median survival is often <1 year, even with treatment
─ High rates of local recurrence and distant metastasis
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Pulmonary blastoma (Lung)
A rare, aggressive biphasic malignant tumor of the lung, composed of a primitive mesenchymal stroma and malignant epithelial (glandular) components resembling fetal lung. It is a subtype of sarcomatoid carcinoma.
Clinical
─ Rare, <0.5% of all lung malignancies
─ Classic (biphasic) pulmonary blastoma typically occurs in adults (mean age ~40 years), slight male predominance, often associated with smoking
─ Well-differentiated fetal adenocarcinoma (monophasic, purely epithelial variant) occurs in younger patients, not smoking-related, and has a better prognosis
─ Site: Usually a large, well-circumscribed peripheral mass; can be central
─ Clin: Symptoms include cough, hemoptysis, chest pain, dyspnea; can be asymptomatic
─ Imaging: Large, solitary, often lobulated mass; may show cystic change or necrosis
Cytology
─ Cells are a characteristic biphasic population:
1. Epithelial component: Cohesive clusters, tubules, or glands of cuboidal to columnar cells, often with subnuclear and supranuclear vacuoles containing glycogen (resembling fetal lung tubules or endometrioid glands); morules (solid nests of cells with bland, eosinophilic cytoplasm and indistinct borders) may be present
2. Mesenchymal (stromal) component: Dispersed or loosely clustered small, round to oval, primitive-appearing cells with scant cytoplasm and hyperchromatic nuclei, resembling the blastemal component of Wilms tumor or other embryonal sarcomas; spindle cell areas may also be present; chondroid or rhabdomyoblastic differentiation is rare
─ Cytoplasm of epithelial cells is moderate, clear to eosinophilic, often vacuolated; stromal cells have scant, poorly defined cytoplasm
─ Nuclei of epithelial cells are relatively uniform, round to oval, with fine chromatin and small nucleoli; stromal cells have hyperchromatic, molded nuclei with coarse chromatin
─ Background shows often bloody; necrosis may be present
─ Absence of mature cartilage or extensive fibromyxoid stroma (unlike hamartoma); absence of overt keratinization (unlike adenosquamous or SCC)
Ancillary studies
─ IHC (+): Epithelial component: Cytokeratins (AE1/AE3, CAM5.2, CK7), EMA, TTF-1 (often), CEA; Mesenchymal (stromal) component: Vimentin, occasionally Desmin, Myogenin (if rhabdomyoblastic), S100 (if chondroid); both components may show nuclear beta-catenin in well-differentiated fetal adenocarcinoma variant and some classic blastomas
─ IHC (-): Epithelial component: Usually negative for neuroendocrine markers; Stromal component: Usually negative for cytokeratins (though focal positivity reported)
─ Mol: DICER1 mutations are common in classic pulmonary blastomas, especially in children and young adults; CTNNB1 (beta-catenin) mutations are characteristic of the well-differentiated fetal adenocarcinoma variant
DDx
─ Carcinosarcoma (another biphasic tumor, but both epithelial and mesenchymal components are overtly malignant and usually high-grade, often resembling conventional NSCLC and a specific sarcoma type, unlike the primitive appearance in blastoma)
─ Adenocarcinoma with sarcomatoid change (pleomorphic carcinoma; epithelial component is usually typical NSCLC, spindle/giant cell component is high-grade, lacks primitive blastemal cells)
─ Synovial sarcoma, biphasic (rare in lung, epithelial component CK7/EMA positive, spindle cells TLE1 positive, characteristic SS18 gene rearrangement)
─ Small cell lung carcinoma (SCLC) with NSCLC component (SCLC component has typical neuroendocrine features, neuroendocrine markers positive)
─ Metastatic Wilms tumor or other embryonal sarcomas (clinical history crucial, site-specific markers if any)
─ Pulmonary hamartoma (if blastoma has chondroid stroma; hamartoma has mature cartilage and fibromyxoid stroma, lacks malignant epithelial and primitive stromal cells)
Prognosis
─ Poor for classic (biphasic) pulmonary blastoma, with 5-year survival ~15-50%; frequent recurrence and metastasis (brain, liver, bone)
─ Well-differentiated fetal adenocarcinoma (monophasic epithelial variant) has a significantly better prognosis
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Carcinosarcoma (Lung)
A rare, aggressive malignant neoplasm composed of an intimate admixture of a carcinomatous component (non-small cell lung carcinoma, usually squamous cell, adenocarcinoma, or large cell) and a sarcomatous component (malignant spindle and/or giant cells, or showing specific heterologous mesenchymal differentiation like chondrosarcoma, osteosarcoma, or rhabdomyosarcoma). It is a subtype of sarcomatoid carcinoma of the lung.
Clinical
─ Rare, <1% of lung cancers
─ Strong association with smoking; predominantly affects elderly males (6th-7th decades)
─ Site: Usually large peripheral masses, but can be central/endobronchial
─ Clin: Aggressive clinical course, often presents with symptoms of cough, dyspnea, chest pain, hemoptysis, weight loss; frequently advanced stage at diagnosis
─ Imaging: Large, often heterogeneous mass, may show necrosis or cavitation; can invade chest wall
Cytology
─ Cells are a biphasic malignant population:
1. Carcinomatous component: Clusters or single cells with features of squamous cell carcinoma (keratinization, dense cytoplasm), adenocarcinoma (gland formation, mucin), or large cell undifferentiated carcinoma
2. Sarcomatous component: Malignant spindle cells (often in fascicles or storiform pattern) and/or bizarre, pleomorphic multinucleated or mononuclear giant cells; heterologous elements (e g , malignant cartilage, bone, or muscle cells) are less commonly seen on cytology but are diagnostic if present
─ Cytoplasm is dimorphic, corresponding to the epithelial and sarcomatous elements
─ Nuclei show high-grade malignant features in both components (pleomorphism, hyperchromasia, irregular chromatin, prominent/irregular nucleoli)
─ Background shows often necrotic (tumor diathesis), hemorrhagic
─ Absence of primitive blastemal cells (unlike pulmonary blastoma); the sarcomatous component is typically high-grade and overtly malignant, not just reactive stroma
Ancillary studies
─ IHC (+): Carcinomatous component: Cytokeratins (AE1/AE3, CAM5.2), EMA; specific markers depending on NSCLC type (p40 for squamous, TTF-1 for adeno); Sarcomatous component: Vimentin (usually strong); may co-express cytokeratins (supporting sarcomatoid carcinoma over true sarcoma); specific mesenchymal markers if heterologous differentiation is present (e g , Desmin/Myogenin for rhabdomyosarcoma, S100 for chondrosarcoma)
─ IHC (-): Sarcomatous component is usually negative for TTF-1, Napsin A (unless it's an adenocarcinoma with sarcomatoid change where spindle cells are derived from it)
─ Mol: KRAS mutations are relatively common; EGFR/ALK alterations are rare; TP53 mutations are frequent
DDx
─ Pleomorphic carcinoma (carcinosarcoma is a type of pleomorphic carcinoma where the sarcomatous component shows specific mesenchymal differentiation or is a fibrosarcoma/MFH-like sarcoma; if only undifferentiated spindle/giant cells, it's pleomorphic carcinoma NOS)
─ Spindle cell (sarcomatoid) squamous cell carcinoma or adenocarcinoma (if sarcomatoid component is dominant and epithelial component is subtle or not sampled)
─ Primary pulmonary sarcoma (very rare, lacks epithelial component; diagnosis of exclusion)
─ Metastatic sarcoma or carcinosarcoma (clinical history crucial)
─ Melanoma, pleomorphic/spindle cell (S100, SOX10, Melan-A/HMB45 positive)
─ Mesothelioma, sarcomatoid or biphasic (pleural-based, specific mesothelial IHC markers positive in epithelioid component if present)
Prognosis
─ Very poor, similar to or worse than pleomorphic carcinoma; highly aggressive with early metastasis and poor response to conventional chemotherapy/radiation
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NUT carcinoma
A rare, highly aggressive, poorly differentiated carcinoma defined by the presence of a nuclear protein in testis (NUTM1) gene rearrangement, most commonly a BRD4-NUTM1 fusion. It typically arises in midline structures of the head, neck, and thorax (mediastinum, lung).
Aka ─ NUT midline carcinoma (NMC)
Clinical
─ Epid: Rare; affects all ages, from infants to older adults, with a peak in adolescents and young adults; no clear sex predilection
─ Site: Midline structures; ~50% in head and neck (sinonasal, nasopharynx, salivary glands), ~50% in thorax (mediastinum, thymus, lung); rarely other sites
─ Clin: Extremely aggressive, rapidly growing tumors; often presents with locally advanced or metastatic disease; symptoms depend on location (e g , airway obstruction, pain, mass effect); median survival is typically <1 year despite aggressive multimodality therapy
─ Imaging: Often large, infiltrative masses with necrosis
Cytology
─ Cells are predominantly dispersed or in loose, poorly cohesive clusters or sheets; may show focal abrupt squamous differentiation (small foci of keratinization or intercellular bridges) in a subset of cases, but often appears undifferentiated
─ Cytoplasm is scant to moderate, often pale, basophilic, or clear/vacuolated, imparting a "fried egg" appearance in some cells
─ Nuclei show monomorphic, round to oval features with vesicular or finely granular chromatin; nucleoli can be prominent, often single and eosinophilic; mitotic figures are usually numerous, and apoptosis is common
─ Background shows often necrotic, with karyorrhectic debris; a neutrophilic infiltrate (rather than lymphocytic) is a characteristic, though not constant, finding
─ Absence of definitive glandular differentiation, overt keratinization in most of the tumor (if present, it's focal and abrupt), or neuroendocrine features
Ancillary studies
─ IHC (+): NUT (nuclear staining, using a specific monoclonal antibody to the NUTM1 protein, is pathognomonic, often showing a characteristic speckled pattern); Cytokeratins (AE1/AE3, CAM5.2, CK5/6, CK7 may be positive, often patchy); p63 and/or p40 (often positive, especially in cases with squamous differentiation); CD34 (focal); CEA (focal)
─ IHC (-): TTF-1 (usually, though a subset of pulmonary NUT carcinomas may stain), Napsin A, S100 protein, Melanoma markers, Lymphoid markers, Neuroendocrine markers (Chromogranin, Synaptophysin), CDX2, PAX8
─ Mol: Demonstration of NUTM1 gene rearrangement by FISH (break-apart probes) or RT-PCR (detecting specific fusions like BRD4-NUTM1, BRD3-NUTM1, or NSD3-NUTM1) is diagnostic
DDx
─ Poorly differentiated squamous cell carcinoma (especially basaloid or non-keratinizing types; SCC is typically NUT negative, though p63/p40 can be positive in both)
─ Small cell lung carcinoma (SCLC has finer "salt & pepper" chromatin, nuclear molding, scantier cytoplasm, neuroendocrine markers positive, NUT negative, TTF-1 often strongly positive)
─ Poorly differentiated adenocarcinoma (TTF-1/Napsin A positive, NUT negative)
─ Germ cell tumor (e g , seminoma, embryonal carcinoma; OCT3/4, SALL4, PLAP positive, specific morphology, NUT negative)
─ Lymphoma (especially large cell or lymphoblastic; CD45 positive, specific lymphoid markers, NUT negative)
─ Ewing sarcoma/PNET (CD99 positive, FLI1 positive, EWSR1 rearrangement, NUT negative, CK often negative)
─ Thymic carcinoma (can be poorly differentiated, but different IHC profile, NUT negative)
─ Metastatic poorly differentiated carcinoma from other sites
Prognosis
─ Extremely poor; highly aggressive with rapid progression and resistance to conventional chemotherapy; median survival is approximately 6-9 months
─ Some responses seen with investigational drugs targeting BET bromodomains (e g , birabresib, molibresib) or HDAC inhibitors
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Thoracic SMARCA4-deficient undifferentiated tumor
A recently recognized, highly aggressive, undifferentiated malignant neoplasm occurring primarily in the thorax (lung, pleura, mediastinum) of adult smokers, characterized by loss of SMARCA4 (BRG1) protein expression, a core subunit of the SWI/SNF chromatin remodeling complex.
Aka ─ SMARCA4-deficient thoracic sarcoma (older term, but now recognized as often having at least focal epithelial differentiation or being purely carcinomatous)
Clinical
─ Epid: Predominantly affects adult male smokers (median age ~50-60 years)
─ Site: Thorax – lung, pleura, mediastinum; can present as large masses
─ Clin: Very aggressive, often presents with advanced-stage disease, dyspnea, chest pain, cough; rapid clinical deterioration is common
─ Imaging: Large, often heterogeneous masses, may show necrosis; pleural effusion can be present
Cytology
─ Cells are typically undifferentiated, appearing in dyscohesive sheets, loose clusters, or as numerous single cells; may show a rhabdoid or plasmacytoid morphology
─ Cytoplasm is moderate to abundant, eosinophilic or amphophilic, sometimes with eccentric nuclei and paranuclear eosinophilic inclusions (rhabdoid feature)
─ Nuclei show large, round to oval, often vesicular features with irregular nuclear contours; chromatin is often open or coarsely clumped; nucleoli are usually prominent and can be large and irregular; mitotic figures are frequent
─ Background shows often necrotic and hemorrhagic
─ Absence of clear squamous, glandular, or neuroendocrine differentiation by morphology (though focal keratin positivity by IHC is common)
Ancillary studies
─ IHC (+): Cytokeratins (AE1/AE3, CAM5.2, often patchy or focal), Vimentin (often); CD34 (can be positive in a subset); Claudin-4 (often positive, helping distinguish from true sarcomas); SOX2 (often positive)
─ IHC (-): Complete loss of nuclear SMARCA4 (BRG1) expression is definitional (internal positive control in stromal/inflammatory cells is essential); SMARCB1 (INI1/SNF5) expression is usually intact (helps distinguish from SMARCB1-deficient tumors like epithelioid sarcoma or atypical teratoid/rhabdoid tumor); TTF-1, Napsin A, p40, S100 protein, Melanoma markers, Lymphoid markers, Neuroendocrine markers are typically negative; HepPar-1 has been reported as positive in a subset, potentially causing confusion with metastatic HCC if not correlated with other findings
─ Mol: Inactivating mutations or deletions of SMARCA4 gene
DDx
─ Poorly differentiated non-small cell carcinoma (adenocarcinoma, squamous cell carcinoma, large cell carcinoma; these are SMARCA4-proficient and usually express more definitive lineage markers like TTF-1 or p40)
─ Malignant mesothelioma, epithelioid or pleomorphic (mesothelial markers like calretinin, WT1 positive; SMARCA4 loss is rare but reported in mesothelioma)
─ Metastatic carcinoma, poorly differentiated (clinical history, IHC for site-specific markers)
─ Melanoma (S100, SOX10, Melan-A/HMB45 positive)
─ Lymphoma, large cell (CD45 positive, lymphoid markers)
─ True sarcoma (e g , epithelioid sarcoma which is SMARCB1-deficient, synovial sarcoma; specific sarcoma markers, CK may be focal but SMARCA4 intact)
─ NUT carcinoma (NUT IHC positive, SMARCA4 intact)
Prognosis
─ Extremely poor, highly aggressive with rapid progression and early metastasis; median survival is very short (typically around 4-7 months)
─ Poor response to conventional chemotherapy and radiotherapy; potential for targeted therapies based on SWI/SNF pathway vulnerabilities is under investigation
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Solitary Fibrous Tumor and other Spindle cell tumors (Lung)
This is a broad category encompassing various benign and malignant neoplasms characterized by a predominant proliferation of spindle-shaped cells. In the thoracic cavity (lung, pleura, mediastinum), this group includes tumors of mesenchymal origin as well as sarcomatoid carcinomas. Accurate diagnosis often requires immunohistochemistry and sometimes molecular studies to differentiate among entities with overlapping morphologic features.
Solitary Fibrous Tumor (SFT)
A mesenchymal neoplasm of fibroblastic/myofibroblastic type, most commonly arising from the pleura, but can occur in virtually any anatomical site, including intrapulmonary or mediastinal locations. Most SFTs are benign, but a subset can behave aggressively.
Clinical
─ Epid: Adults, wide age range (peak 5th-7th decades); no sex predilection
─ Site: Pleura (visceral > parietal, ~80% of thoracic SFTs); less commonly intrapulmonary, mediastinal, pericardial, or chest wall
─ Clin: Often asymptomatic and discovered incidentally; symptomatic cases may present with cough, chest pain, dyspnea; large tumors can cause compressive symptoms; paraneoplastic syndromes like hypoglycemia (Doege-Potter syndrome, due to IGF2 production) occur in <5%, usually with large tumors
─ Imaging: Typically a well-circumscribed, often lobulated, solitary mass that may be pedunculated (especially pleural SFTs); can be very large; avidly enhances with contrast
Cytology
(FNA or exfoliative cytology of pleural fluid if tumor cells shed, which is uncommon)
─ Cells are predominantly bland spindle cells, appearing singly, in loose clusters, or in more cohesive fascicular or storiform fragments; cellularity can be variable, often moderate
─ Cytoplasm is scant to moderate, pale, wispy, with ill-defined cell borders; may appear bipolar
─ Nuclei show oval to elongated, often tapered features with smooth contours; chromatin is typically fine and evenly distributed; nucleoli are usually inconspicuous; mild nuclear atypia may be seen, but significant pleomorphism is uncommon in conventional SFT
─ Background shows often contains characteristic dense, ropey, or hyalinized collagenous stromal fragments (may appear as "ropy collagen" or "amianthoid fibers"); a prominent feature is the presence of numerous, often branching, thin-walled "staghorn" or hemangiopericytoma-like blood vessels, which may be seen within or intimately associated with cell clusters; myxoid change can be present in some tumors
─ Absence of overt epithelial features (glands, keratinization), significant necrosis, or high mitotic activity (in most benign/conventional SFTs)
Ancillary studies
─ IHC (+): STAT6 (nuclear, highly sensitive and specific, reflects NAB2-STAT6 gene fusion), CD34 (strong and diffuse in most cases, but can be lost in malignant SFTs), CD99, BCL2; Vimentin
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2), S100 protein, Desmin, SMA (smooth muscle actin), EMA, Calretinin, WT1, TTF-1
─ Mol: NAB2-STAT6 gene fusion resulting from intrachromosomal inversion inv(12)(q13q13) is the defining molecular alteration, present in virtually all SFTs
DDx
─ Schwannoma (S100, SOX10 positive; STAT6, CD34 negative; Antoni A/B areas, Verocay bodies)
─ Leiomyoma/Leiomyosarcoma (Desmin, SMA positive; STAT6 negative)
─ Synovial sarcoma, monophasic spindle cell (TLE1 positive; CK7, EMA may be focally positive; specific SS18 gene rearrangement; STAT6 negative)
─ Spindle cell (sarcomatoid) carcinoma (Cytokeratins positive, often p40/p63 if squamous component; STAT6 negative)
─ Sarcomatoid mesothelioma (pleural-based, may have history of asbestos exposure; mesothelial markers like calretinin/WT1 may be positive in epithelioid areas if biphasic, but often lost in pure sarcomatoid; BAP1 loss common; STAT6 negative)
─ Fibrosarcoma (diagnosis of exclusion, STAT6 negative, CD34 often negative)
─ Malignant peripheral nerve sheath tumor (MPNST) (often associated with NF1, S100 variable/lost, SOX10 often positive, more atypia/mitoses, STAT6 negative)
─ Desmoplastic mesothelioma (pleural, bland spindle cells in dense collagen, but infiltrative, mesothelial markers may be focally positive)
Prognosis
─ Most SFTs are benign and cured by complete surgical excision
─ ~10-20% are malignant or behave aggressively (malignant SFT), defined by features such as large size (>10-15 cm), high cellularity, nuclear pleomorphism, >4 mitoses/10 HPF, tumor necrosis, and infiltrative margins
─ Risk stratification models (e g , Demicco score for soft tissue SFTs) can help predict metastatic risk
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Primary germ cell tumors of the mediastinum
A heterogeneous group of neoplasms derived from primordial germ cells that aberrantly migrate to or arise in the mediastinum, most commonly the anterior compartment. They parallel gonadal germ cell tumors in histology and include teratoma (mature, immature), seminoma, embryonal carcinoma, yolk sac tumor, choriocarcinoma, and mixed forms.
Clinical
─ Rare, account for ~10-15% of anterior mediastinal masses in adults, but are the most common anterior mediastinal tumor in children and young adults
─ Epid: Predominantly affect adolescents and young adults (peak 20-35 years); strong male predominance for malignant GCTs (seminoma, non-seminomatous GCTs); teratomas occur equally in males and females
─ Site: Anterior mediastinum is the most common extragonadal site
─ Clin: Symptoms vary; ~50% asymptomatic (incidental finding); can cause chest pain, cough, dyspnea, superior vena cava syndrome; non-seminomatous GCTs may produce serum tumor markers (AFP for yolk sac tumor, hCG for choriocarcinoma/some embryonal carcinomas); seminomas may produce hCG (syncytiotrophoblasts) or LDH
─ Association: Mediastinal non-seminomatous GCTs in males are frequently associated with Klinefelter syndrome (47,XXY) and hematologic malignancies (especially acute myeloid leukemia)
Cytology
(FNA of anterior mediastinal mass; features depend on specific GCT type)
─ Teratoma, Mature:
─ Cells are a mixture of elements from all three germ layers: mature squamous cells (keratinizing, anucleate), glandular cells (respiratory, intestinal, mucinous), fragments of cartilage, adipose tissue, neural tissue (glial cells, ganglion cells), mesenchymal spindle cells
─ Cytoplasm varies with cell type
─ Nuclei are generally bland, consistent with mature differentiated tissues
─ Background shows often contains keratinous debris, mucin, amorphous material; inflammatory cells may be present if ruptured
─ Absence of immature elements or overtly malignant cells (in pure mature teratoma)
─ Seminoma:
─ Cells are large, polygonal, predominantly dispersed or in loose, poorly cohesive clusters; a "tigroid" background (periodic acid-Schiff [PAS]-positive, glycogen-rich cytoplasmic fragments) is characteristic but not always prominent on cytology
─ Cytoplasm is moderate to abundant, clear or pale eosinophilic, fragile, often with distinct cell borders
─ Nuclei show large, round to oval, centrally located features with vesicular chromatin and one or more prominent, often angular or "squared-off," macronucleoli
─ Background shows often contains a variable number of mature lymphocytes (T-cells) intimately admixed with tumor cells; granulomatous inflammation (sarcoid-like granulomas) may be present; necrosis is uncommon unless large tumor
─ Absence of overt glandular/squamous differentiation or high-grade pleomorphism (unlike embryonal ca or choriocarcinoma)
─ Embryonal Carcinoma:
─ Cells are large, highly pleomorphic, epithelioid, appearing in cohesive clusters, sheets, or singly; may form abortive glandular or papillary structures
─ Cytoplasm is moderate, amphophilic or basophilic, often vacuolated
─ Nuclei show large, irregular features with coarse, clumped chromatin and prominent, often multiple and irregular, macronucleoli; high N:C ratio; frequent mitoses, including atypical forms
─ Background shows often necrotic, hemorrhagic
─ Yolk Sac Tumor (Endodermal Sinus Tumor):
─ Cells are variable, from bland cuboidal/flattened cells lining microcysts or papillae to more pleomorphic cells; Schiller-Duval bodies (glomeruloid structures with a central vessel lined by tumor cells) are pathognomonic but rarely seen on cytology
─ Cytoplasm is moderate, clear to eosinophilic, may contain hyaline globules (PAS-D positive, AFP positive)
─ Nuclei show vesicular chromatin, prominent nucleoli
─ Background shows often myxoid or bloody; hyaline globules may be extracellular
─ Choriocarcinoma:
─ Cells are a biphasic population of malignant syncytiotrophoblasts (large, multinucleated giant cells with dense eosinophilic/amphophilic cytoplasm, multiple pleomorphic/hyperchromatic nuclei) and cytotrophoblasts (smaller, mononuclear cells with clear cytoplasm, round nuclei, distinct nucleoli); both components must be present for diagnosis
─ Background shows extensive hemorrhage and necrosis are characteristic
Ancillary studies
─ Teratoma: IHC not usually needed if mature elements from all three germ layers are identified.
─ Seminoma:
─ IHC (+): OCT3/4 (nuclear), SALL4 (nuclear), PLAP (placental alkaline phosphatase, membranous), c-Kit (CD117, membranous), D2-40 (podoplanin, variable)
─ IHC (-): Cytokeratins (AE1/AE3 usually negative or only focal dot-like), EMA, CD30, AFP, hCG (unless syncytiotrophoblasts present), SOX2
─ Embryonal Carcinoma:
─ IHC (+): Cytokeratins (AE1/AE3, CAM5.2), OCT3/4 (nuclear), SALL4 (nuclear), CD30 (membranous/Golgi), SOX2 (nuclear)
─ IHC (-): c-Kit (usually), PLAP (often weaker/patchier than seminoma), AFP (unless yolk sac component), hCG (unless syncytiotrophoblasts present)
─ Yolk Sac Tumor:
─ IHC (+): AFP (alpha-fetoprotein, cytoplasmic), Glypican-3, SALL4 (nuclear), Cytokeratins (AE1/AE3, CAM5.2)
─ IHC (-): OCT3/4, PLAP, CD30, hCG
─ Choriocarcinoma:
─ IHC (+): hCG (strong in syncytiotrophoblasts), Cytokeratins (AE1/AE3, CAM5.2); GATA3 may be positive in trophoblastic cells
─ IHC (-): AFP, PLAP, OCT3/4
─ Serum Markers: AFP (elevated in yolk sac tumor, some embryonal ca/mixed GCTs), hCG (elevated in choriocarcinoma, some seminomas with syncytiotrophoblasts, some embryonal ca), LDH (often elevated in seminoma and other GCTs)
DDx
(Depends on specific GCT type suspected)
─ Teratoma: Metastatic carcinoma with diverse differentiation (e g , adenosquamous), thymoma with cystic change (dual population of epithelial cells and lymphocytes)
─ Seminoma: Lymphoma (especially DLBCL, anaplastic large cell lymphoma; lymphoid markers CD45, CD20, CD30 positive, GCT markers negative), thymoma (lymphocyte-rich; epithelial cells CK/p63 positive), poorly differentiated carcinoma (CK positive, GCT markers negative)
─ Embryonal Ca: Poorly differentiated carcinoma/adenocarcinoma (CK positive, but OCT3/4, SALL4 negative; TTF-1 may be positive in lung adeno), thymic carcinoma (different CK profile, CD5, c-Kit often positive), melanoma (S100/melanoma markers positive)
─ Yolk Sac Tumor: Clear cell adenocarcinoma (lung primary or metastatic; TTF-1 or site-specific markers positive, AFP negative), mesothelioma with clear cell change (mesothelial markers positive)
─ Choriocarcinoma: Poorly differentiated carcinoma with bizarre giant cells (hCG negative), metastatic choriocarcinoma (clinical history of gonadal or gestational primary)
Prognosis
─ Mature teratoma: Benign, excellent prognosis after complete excision
─ Immature teratoma: Prognosis depends on grade (amount of immature neuroepithelium) and presence of other malignant GCT components
─ Seminoma: Highly radiosensitive and chemosensitive; excellent prognosis even with metastatic disease (>90% cure rate)
─ Non-seminomatous GCTs (embryonal ca, yolk sac, choriocarcinoma, mixed): More aggressive than seminoma, but modern cisplatin-based chemotherapy has significantly improved outcomes; prognosis depends on stage, tumor markers, and specific components
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Primary angiosarcoma of the lung
An exceedingly rare, highly aggressive malignant vascular neoplasm arising from endothelial cells of pulmonary blood vessels. Most angiosarcomas involving the lung are metastatic.
Clinical
─ Extremely rare as a primary lung tumor
─ Can occur at any age, but often in adults; may be associated with prior radiation or foreign bodies
─ Site: Can be solitary or multifocal/diffuse within the lung parenchyma; may involve pleura
─ Clin: Aggressive course; presents with hemoptysis, dyspnea, chest pain, anemia; diffuse forms (pulmonary angiosarcomatosis) can mimic diffuse alveolar damage or hemorrhage
─ Imaging: Variable; solitary or multiple nodules/masses, diffuse infiltrates, ground-glass opacities, pleural effusion; often hemorrhagic
Cytology
(BAL, FNA, or pleural fluid cytology)
─ Cells are epithelioid, spindle-shaped, or pleomorphic, appearing singly or in loose, poorly cohesive clusters; may line or be associated with vascular channels if tissue fragments are obtained; "floret-like" or pseudo-acinar arrangements can be seen
─ Cytoplasm is scant to moderate, eosinophilic or amphophilic, sometimes vacuolated (intracytoplasmic lumina, which may contain erythrocytes); hemosiderin pigment may be present
─ Nuclei show marked atypia, pleomorphism, hyperchromasia, and irregular nuclear contours; nucleoli are often prominent and can be large and irregular; mitotic figures, including atypical forms, may be frequent
─ Background shows often extensively hemorrhagic; necrotic debris may be present; hemosiderin-laden macrophages
─ Absence of definitive keratinization, glandular mucin, or neuroendocrine features (unless a combined tumor, which is exceptionally rare for primary angiosarcoma)
Ancillary studies
─ IHC (+): Vascular endothelial markers: CD31 (membranous, most sensitive and specific), ERG (nuclear, highly sensitive and specific), Factor VIII-related antigen (von Willebrand factor, cytoplasmic), CD34 (variable, less specific), FLI1 (nuclear)
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2 usually, though epithelioid angiosarcomas can rarely show focal CK positivity, creating a diagnostic pitfall), TTF-1, Napsin A, p40, S100 protein, Melanoma markers, Lymphoid markers, Calretinin
─ Mol: MYC amplification is common in radiation-induced and chronic lymphedema-associated angiosarcomas, but less so in primary sporadic angiosarcomas; KDR mutations or FLT4 amplifications reported in some cases
DDx
─ Poorly differentiated carcinoma (especially adenocarcinoma or squamous cell carcinoma with epithelioid or spindle features; CK positive, vascular markers negative)
─ Melanoma, epithelioid or spindle cell (S100, SOX10, Melan-A/HMB45 positive, vascular markers negative)
─ Sarcomatoid mesothelioma (pleural-based, may have epithelioid/spindle cells, mesothelial markers may be focally positive, BAP1 loss)
─ Other sarcomas with epithelioid or spindle features (e g , epithelioid sarcoma which is CK positive and INI1 lost, synovial sarcoma which is TLE1 positive; specific sarcoma markers and molecular genetics crucial)
─ Organizing pneumonia/diffuse alveolar damage with reactive endothelial atypia (clinical context, less severe atypia, no true invasion if tissue fragments seen)
─ Kaposi sarcoma (HHV8 positive, often in immunocompromised patients, different morphology with slit-like vascular spaces and extravasated RBCs)
─ Epithelioid hemangioendothelioma (another vascular tumor, but generally lower grade, cells often embedded in myxohyaline stroma, WWTR1-CAMTA1 or YAP1-TFE3 fusions)
Prognosis
─ Extremely poor; highly aggressive with rapid local invasion and early distant metastasis (often to other parts of lung, liver, bone, brain)
─ Median survival is typically very short, measured in months, even with multimodality treatment
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🤤Salivary
Mixed Inflammatory (Salivary Pattern 1)
Cytology
— Mixed population of inflammatory cells (neutrophils, lymphocytes, histiocytes)
— Granulation tissue may be present
— Scant or absent salivary gland acini and ducts
— Background of proteinaceous debris
DDx
— Acute / Chronic Sialadenitis
— -May see "sulfur granules" in Actinomyces infection
— -Stellate granulation tissue is common
— Granulomatous Sialadenitis
— -Epithelioid granulomas, giant cells, and necrotic debris
— -Necrosis suggests infection (TB, fungus), while tight, non-necrotizing granulomas suggest sarcoidosis
— Necrotizing Sialometaplasia
— -Atypical squamous metaplasia of ductal cells
— -Necrotic "ghostlike" acini
— Branchial Cleft Cyst (inflamed)
— -Cystic debris with anucleated squamous cells
— -Cholesterol crystals are common
Note
— Granulation tissue can mimic non-keratinizing SCC
— An inflamed cystic lesion in the lateral neck of an adult is suspicious for metastatic SCC
— Inflammation can be secondary to an underlying neoplasm
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Lymphocyte-Only (Salivary Pattern 2)
Cytology
— Smear composed exclusively of lymphoid cells
— Typically a polymorphous population of lymphocytes and lymphohistiocytic aggregates
DDx
— Benign / Reactive Lymph Node
— —Polymorphous population, tangible body macrophages, germinal center fragments
— Lymphoepithelial Sialadenitis (undersampled)
— —Lacks the epithelial component due to sampling error
— Lymphoma
— —Monomorphous population of atypical lymphoid cells
Note
— Bare acinar nuclei from normal salivary gland can mimic small lymphocytes
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Epithelial Proliferations and Neoplasms Without Myoepithelial Stromal Component (Salivary Pattern 3)
Cytology
— Lacks significant inflammatory or myoepithelial stromal components
— Composed primarily of epithelial cells (acinar, ductal, oncocytic, etc.)
— Lacks a prominent lymphoid background
DDx
— Benign
— —Normal Salivary Gland
— — -"Bunch of grapes" acini, ducts, and admixed adipose tissue
— —Sialadenosis
— — -Hypertrophic/hyperplastic acini, high cellularity, lacks significant atypia
— —Oncocytoma / Nodular Oncocytosis
— — -Sheets of oncocytes with granular cytoplasm and well-defined borders
— Malignant
— —Mucoepidermoid Carcinoma
— — -Mixture of mucinous, intermediate, and epidermoid cells
— —Acinic Cell Carcinoma
— — -Bland cells with fragile, granular/vacuolated cytoplasm; dispersed bare nuclei
— —Adenocarcinoma, NOS
— — -High-grade features, 3D groups, glandular/papillary architecture
— —Salivary Duct Carcinoma
— — -High-grade features, resembles breast ductal carcinoma (cribriform architecture)
— —Metastatic Carcinoma
— — -Morphology is "foreign" to the salivary gland; requires clinical history
Note
— Bare acinar nuclei from normal gland or acinic cell carcinoma can mimic lymphocytes
— High-grade primary tumors can be difficult to distinguish from metastases without clinical history and IHC
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Epithelial Neoplasms With Abundant Myoepithelial Stromal Component (Salivary Pattern 4)
Cytology
— Abundant myoepithelial stroma, easily recognizable at low power
— Biphasic population of epithelial and myoepithelial cells
— Stroma can be fibrillary and cellular or dense and acellular ("gum balls")
DDx
— Pleomorphic Adenoma
— —Most common benign tumor with this pattern
— —Key feature is fibrillary chondromyxoid stroma that merges with cells
— —Plasmacytoid myoepithelial cells are characteristic
— Adenoid Cystic Carcinoma
— —Most common malignant tumor with this pattern
— —Key feature is dense, acellular hyaline "gum balls" of stroma
— —Uniform basaloid cells with scant cytoplasm and hyperchromatic nuclei
— Carcinoma ex Pleomorphic Adenoma
— —Malignant epithelial component seen alongside benign pleomorphic adenoma elements (including fibrillary stroma)
— Epithelial-Myoepithelial Carcinoma
— —Biphasic population of inner ductal cells and outer clear myoepithelial cells
Note
— Key distinction: PA stroma is fibrillary and merges with cells; AdCC stroma is dense, acellular, and sharply demarcated
— High-grade or cellular variants of these tumors may have scant stroma (Pattern 5)
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Epithelial Neoplasms With Scant Myoepithelial Stromal Component (Salivary Pattern 5)
Cytology
— Predominantly epithelial component with a scant myoepithelial stromal component
— Biphasic population of epithelial and myoepithelial cells
— Stroma may be difficult to recognize at low power
DDx
— Benign
— —Cellular Pleomorphic Adenoma
— — -Signature feature is fibrillary stroma, even if scant; may have plasmacytoid myoepithelial cells
— —Basal Cell Adenoma
— — -Cohesive fragments of basaloid cells surrounded by a thin cocoon of dense, cordlike stroma
— —Myoepithelioma
— — -Almost exclusively myoepithelial cells (spindle, plasmacytoid, clear, or epithelioid)
— Malignant
— —Adenoid Cystic Carcinoma (High-Grade)
— — -Basaloid cells with high N:C ratio; rare, small "gum ball" stroma; necrosis
— —Carcinoma ex Pleomorphic Adenoma
— — -Malignant cells admixed with benign pleomorphic adenoma components (including fibrillary stroma)
— —Myoepithelial Carcinoma
— — -Malignant features (atypia, mitoses, necrosis) in a myoepithelioma-like background
— —Epithelial-Myoepithelial Carcinoma
— — -Biphasic population of inner basaloid ductal cells and outer clear myoepithelial cells
— —Polymorphous Adenocarcinoma (PLGA)
— — -Cellular monotony with architectural variability (solid, tubular, cribriform, papillary); lacks fibrillary stroma
Note
— This pattern has a broader differential diagnosis than the stroma-rich pattern
— Distinguishing Basal Cell Adenoma from Adenoid Cystic Carcinoma can be difficult
— The presence of atypia, mitoses, and necrosis distinguishes malignant from benign myoepithelial tumors
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Epithelial Proliferations and Neoplasms Associated With a Lymphoid Background (Salivary Pattern 6)
Cytology
— Biphasic population of epithelial cells and a prominent lymphoid background
— Lacks a myoepithelial stromal component
— Epithelial component is variable (oncocytic, ductal, acinar, squamous, etc.)
— May have a cystic and/or granular background
DDx
— Benign Non-Neoplastic
— —Chronic Sialadenitis
— — -Atrophic acini, ductal fragments, mixed chronic inflammation
— —Lymphoepithelial Sialadenitis (Sjögren/Mikulicz)
— — -Heterogeneous lymphocytes, germinal centers, lymphoepithelial lesions
— —Benign Lymphoepithelial Cyst
— — -Cystic background with squamous and/or columnar cells
— —Branchial Cleft Cyst
— — -Cystic debris, anucleated squamous cells, cholesterol crystals
— Benign Neoplastic
— —Warthin Tumor
— — -Sheets of oncocytic cells in a lymphoid and granular, cystic background
— —Sebaceous Lymphadenoma
— — -Fragments of bland sebaceous cells with foamy cytoplasm
— Malignant
— —Mucoepidermoid Carcinoma
— — -Contains mucinous, intermediate, and/or epidermoid cells
— —Acinic Cell Carcinoma
— — -Bland cells with fragile, granular cytoplasm; dispersed bare nuclei
— —Lymphoepithelial Carcinoma
— — -High-grade epidermoid/spindle cells intimately mixed with lymphocytes
— —Metastatic Carcinoma (e.g., SCC, Melanoma)
— — -Malignant cells "foreign" to salivary gland; requires clinical history
Note
— Warthin tumor is the most common neoplasm with this pattern
— Distinguishing Warthin tumor from mucoepidermoid carcinoma can be difficult
— The absence of myoepithelial stroma is a key feature of this pattern
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Non-Diagnostic (I) (Milan System)
Non-Neoplastic (II) (Milan System)
Atypia of Undetermined Significance (AUS) (III) (Milan System)
Benign Neoplasm (IVA) (Milan System)
Salivary Gland Neoplasm of Uncertain Malignant Potential (SUMP) (IVB) (Milan System)
Suspicious for Malignancy (SM) (V) (Milan System)
Malignant (VI) (Milan System)
Normal Salivary Gland
Benign salivary gland tissue composed of serous and/or mucinous acini, ductal structures, and admixed adipose tissue. Its appearance on fine needle aspiration is characterized by lobulated, "bunch of grapes" clusters of acinar cells associated with ducts and fat, a pattern that helps distinguish it from neoplastic processes.
Clinical
─ Commonly seen in FNAB smears, either as the sole material from a non-pathologic gland or admixed with a pathologic process.
Cell Pattern
─ Epithelial proliferations without a myoepithelial stromal component.
─ "Bunch of grapes" pattern: A mixture of acini (serous, serous/mucinous, or mucinous depending on the gland) and a smaller number of ductal tissue fragments.
─ Lobular, grapelike clusters of acini often converge on a stemlike benign salivary gland duct.
─ Adipose tissue is commonly present and often intimately associated with the acini and ducts.
Cytoplasm
─ Acinar cells have abundant granular to foamy cytoplasm that is fragile.
─ Ductal cells have dense, homogenous cytoplasm with bland, cuboidal cells.
Nuclei
─ Acinar cells have small, eccentrically placed, dark nuclei.
Background
─ Stripped bare acinar nuclei are common due to cytoplasmic fragility and may mimic a population of small lymphocytes.
Absent
─ Significant inflammation, atypia, necrosis, or myoepithelial-derived stroma.
DDx
─ Sialadenosis: Features hypertrophic/hyperplastic acini but is much more cellular than a normal gland aspirate.
─ Acinic cell carcinoma: Lacks the intimate admixture of adipose tissue and ductal structures seen in normal gland aspirates.
─ Lymphocyte-rich aspirates: The background of stripped bare acinar nuclei can mimic a population of small lymphocytes.
Note
─ The key diagnostic feature is the "bunch of grapes" architecture of acini combined with ductal elements and admixed adipose tissue.
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Acute Sialadenitis
Acute inflammation of the salivary gland, typically caused by a viral or bacterial infection, resulting in a painful, tender swelling of the gland.
Clinical
─ Etiology may be suppurative (e.g., *S. aureus*, *Strep* species) or nonsuppurative (viral).
─ Suppurative forms are more common in adults; nonsuppurative in children.
─ The parotid gland is the most common site.
─ Patients present with a generalized, painful, tender swelling of the gland.
Cell Pattern
─ Mixed inflammatory pattern.
─ A combination of inflammatory cells, including abundant neutrophils, histiocytes (which may be multinucleated), lymphocytes, and plasma cells.
─ Stellate fragments of granulation tissue may be present.
Background
─ Proteinaceous debris, and in suppurative cases, necroinflammatory debris.
─ Aggregates of filamentous bacteria ("Sulfur granules") may be seen in *Actinomyces* infections.
Absent
─ Normal salivary gland acini and ducts are often rare or entirely absent.
DDx
─ Nonkeratinizing squamous cell carcinoma (SCC): Can be confused with the plump endothelial cells of granulation tissue. However, SCC shows more nuclear atypia.
─ Infarcted oncocytic neoplasm.
─ Tumor diathesis in high-grade cancer.
Note
─ The defining feature is a mixed inflammatory pattern dominated by neutrophils, often with necrotic debris and reactive granulation tissue.
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Chronic Sialadenitis
A chronic inflammatory condition of the salivary gland, most often the submandibular gland, typically resulting from duct obstruction. It leads to acinar atrophy, fibrosis, and a prominent lymphoid infiltrate, which can be associated with metaplastic and reactive ductal changes.
Clinical
─ Most commonly affects the submandibular gland.
─ Often caused by duct obstruction (sialoliths), but also trauma, autoimmune conditions, or radiation.
─ Patients present with swelling and firmness of the gland, which may be painful, especially after eating.
Cell Pattern
─ Epithelial proliferation with a lymphoid background.
─ Generally hypocellular aspirate.
─ Small, cohesive groups of ductal cells, often with blunted edges.
─ Atrophic acinar cell clusters may be present but are often reduced in number or completely absent.
Cytoplasm
─ Ductal cells may undergo metaplastic changes, appearing squamous, mucinous, or oncocytic.
Nuclei
─ Ductal cells are generally bland but can show reactive nuclear enlargement.
─ Marked anaplasia is not a feature.
Background
─ A mixed population of chronic inflammatory cells (lymphocytes, plasma cells).
─ Fibrotic stromal components are characteristic.
─ Amylase crystalloids (non-birefringent) may be seen.
─ Lymphoid cells may cause streaking artifacts.
Absent
─ Significant numbers of acinar cells (they are typically atrophic or absent).
─ High cellularity and large, three-dimensional basaloid groups.
─ Profound nuclear anaplasia or features of overt malignancy.
DDx
─ Basaloid neoplasm: These are typically much more cellular with three-dimensional architectural groups.
─ Mucoepidermoid Carcinoma (MEC): Mucinous and squamous metaplasia can mimic MEC, but chronic sialadenitis lacks the cellularity, discohesion, and atypical intermediate cells of MEC.
─ Warthin Tumor: Oncocytic metaplasia can be seen, but Warthin tumor has numerous, distinct oncocytic sheets, a cystic and debris-filled background, and generally lacks the prominent fibrosis.
Note
─ Key features are a combination of acinar atrophy, fibrosis, chronic inflammation, and preserved, sometimes reactive, ductal structures.
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Chronic Sclerosing Sialadenitis (Kuttner Tumor)
A subtype of chronic sialadenitis, now recognized as an IgG4-related disease, characterized by marked periductal fibrosis, severe acinar atrophy, and a prominent lymphoplasmacytic infiltrate that results in a firm, tumor-like mass.
Clinical
─ Almost exclusively involves the submandibular gland and can be bilateral.
─ Typically affects adults over 40.
─ Presents as a very firm, fixed mass, clinically mimicking a neoplasm.
Cell Pattern
─ Epithelial proliferation with a lymphoid background.
─ Aspirates are often scant due to fibrosis.
─ A low number of epithelial tissue fragments, composed primarily of small, atrophic ductal cells.
Nuclei
─ Ductal cells are bland and atrophic.
Background
─ Moderate to marked lymphoid background rich in plasma cells.
─ Characteristic fragments of dense, sclerotic (fibrotic) stroma, which may surround the attenuated ducts.
Absent
─ Abundant acinar cells (they are severely atrophic or absent).
─ Large, hyperplastic lymphoepithelial lesions (seen in LESA).
DDx
─ Lymphoepithelial Sialadenitis: Affects the parotid gland, whereas Kuttner tumor affects the submandibular. LESA has more intense lymphoid proliferation and larger lymphoepithelial fragments without the prominent sclerosis.
─ Other forms of Chronic Sialadenitis: Kuttner tumor is distinguished by its intense, dense fibrosis and prominent plasma cell component.
Note
─ A scant aspirate with atrophic ducts, a lymphoplasmacytic infiltrate, and fragments of dense, sclerotic stroma in a firm submandibular mass is highly suggestive.
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Granulomatous Sialadenitis
An inflammatory condition of the salivary gland characterized by the formation of granulomas, which are collections of epithelioid histiocytes, often with giant cells. It has numerous causes, including infection, duct obstruction, and systemic autoimmune diseases.
Clinical
─ The most common cause is duct obstruction (e.g., from sialolithiasis) leading to mucin extravasation.
─ Infectious causes include mycobacteria (most common infectious cause), fungi (e.g., Actinomycosis), and cat-scratch disease.
─ Sarcoidosis is a common systemic cause.
─ Can present similarly to chronic sialadenitis with generalized swelling of the gland.
Cell Pattern
─ Mixed inflammatory pattern.
─ Scant numbers of normal acinar and ductal cells may be present, depending on the extent of inflammation.
─ The defining feature is the presence of granulomas: groups of epithelioid or spindle-shaped histiocytes with oval to elongated nuclei.
Background
─ A mixture of acute and chronic inflammatory cells.
─ Multinucleated giant cells are often present.
─ Necrotic debris may be seen; frank granular necrosis suggests an infectious etiology (mycobacterial, fungal), whereas its absence is characteristic of sarcoidosis.
Absent
─ In sarcoidosis, necrosis and significant acute inflammation are typically absent.
DDx
─ Acute or Chronic Sialadenitis: Can be mimicked if granulomas are rare or not recognized.
─ Obstructive Neoplasms: A benign or malignant tumor can cause duct obstruction, leading to a secondary granulomatous response.
Note
─ Identification of epithelioid histiocytes forming granulomas is essential for the diagnosis; the type of necrosis can help point to a specific etiology.
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Necrotizing Sialometaplasia
A benign, self-limiting, ischemic inflammatory condition that primarily affects minor salivary glands and can clinically and cytologically mimic a high-grade malignancy due to rapid growth, ulceration, and significant reactive atypia of metaplastic ductal epithelium.
Clinical
─ A rare condition, most commonly affecting the minor salivary glands of the hard palate.
─ Believed to be caused by an ischemic event (e.g., secondary to surgery, radiation, or trauma).
─ Presents as a rapidly growing, often painful, ulcerated lesion that mimics cancer.
─ Heals spontaneously, usually within several weeks to a few months.
Cell Pattern
─ Mixed inflammatory pattern, usually with necrotic debris.
─ Features extensive squamous metaplasia of the salivary gland ductal cells.
─ Cells are seen in tissue fragments and as single dispersed cells.
Nuclei
─ The metaplastic squamous ductal cells can show significant reactive cytologic atypia and nuclear enlargement, but lack the definitive criteria of malignancy.
Background
─ A "dirty" background with necrotic debris is characteristic.
─ Acute and chronic inflammation and granulation tissue are present.
Absent
─ Well-preserved acini are usually absent; instead, "ghostlike" acinar outlines may be seen.
DDx
─ Mucoepidermoid Carcinoma (High-Grade): Can be mimicked due to squamous atypia, but NSM has a more prominent inflammatory and necrotic background without true intermediate or mucinous malignant cells.
─ Squamous Cell Carcinoma (SCC): NSM lacks the overt malignant nuclear features of SCC, despite the reactive atypia. Clinical history is crucial for distinction.
Note
─ Despite its alarming clinical and cytologic presentation, this is a benign reactive process; recognizing the combination of squamous metaplasia, necrosis, and inflammation is key.
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Lymphoepithelial Sialadenitis
An autoimmune inflammatory disorder (e.g., Sjögren syndrome) characterized by a dense lymphoid infiltrate that replaces acinar tissue and causes hyperplasia and metaplasia of the ductal epithelium, forming characteristic "lymphoepithelial lesions."
Clinical
─ An autoimmune process, often associated with Sjögren syndrome (Mikulicz disease).
─ Presents as a diffuse, firm enlargement of the salivary gland, usually the parotid, and is often bilateral.
─ Carries an increased risk for the development of MALT lymphoma.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid background.
─ Cohesive, monolayered sheets and tissue fragments of ductal cells (lymphoepithelial lesions).
─ The epithelial sheets are often heavily infiltrated by lymphocytes.
Nuclei
─ Ductal epithelial cells have round, oval, or spindle-shaped bland nuclei.
─ May show some nuclear overlap and occasional grooves due to reactive/reparative changes.
─ Lacks marked pleomorphism or overt features of malignancy.
Background
─ A heterogeneous, polymorphous population of lymphoid cells.
─ Germinal center fragments and plasma cells are often present.
Absent
─ Acinar cells are usually absent or scant.
─ Does not have the oncocytic cells and granular, cystic debris seen in Warthin tumor.
DDx
─ Warthin Tumor: Warthin tumors are composed of oncocytic cells, not hyperplastic ductal cells, and their lymphoid component is typically less polymorphous.
─ Chronic Sialadenitis: Has fewer lymphocytes and lacks the large, characteristic lymphoepithelial tissue fragments.
─ MALT Lymphoma: The development of a monomorphic lymphocyte population should raise concern for lymphoma.
Note
─ The key diagnostic feature is the combination of a polymorphous lymphoid population and variably-sized lymphoepithelial tissue fragments.
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Benign Lymphoepithelial Cyst
A true cyst lined by epithelium (often squamous) with a prominent lymphoid component in its wall. These are most common in the parotid gland and can be associated with HIV infection.
Clinical
─ Most commonly occurs within the parotid gland.
─ Can affect adults over 30 years old.
─ HIV-related lesions are a key association and may present with bilateral cysts and lymphadenopathy.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid and cystic background.
─ Epithelial components usually consist of tissue fragments of squamous cells.
─ Columnar, cuboidal, or ciliated cells can also occur.
Nuclei
─ Squamous cells are typically bland, often anucleated or degenerating.
Background
─ Cystic debris, lymphocytes, and macrophages are characteristic.
─ A polymorphous lymphoid population is present, sometimes with lymphohistiocytic aggregates.
─ Keratin debris and proteinaceous fluid are common.
Absent
─ Does not have the large, cohesive, sheet-like lymphoepithelial lesions seen in LESA.
─ Lacks the oncocytes of Warthin tumor or the atypical cells of a cystic carcinoma.
DDx
─ Branchial Cleft Cyst: Cytologically can be identical; clinical location is the key discriminator.
─ Warthin Tumor: Lacks the characteristic oncocytes found in Warthin tumor.
─ Cystic Mucoepidermoid Carcinoma: Lacks the malignant intermediate and mucinous cells of MEC. Any residual mass after aspiration should be re-biopsied.
Note
─ A cystic aspirate containing squamous cells and a polymorphous lymphoid population is characteristic.
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Postradiation Sialadenitis
A reactive process occurring in salivary glands after radiation therapy, characterized by acinar atrophy, ductal metaplasia with atypia, and fibrosis, which can clinically and cytologically mimic recurrent malignancy.
Clinical
─ Occurs after radiation to the head and neck area (e.g., for thyroid or other cancers).
─ The gland becomes firm, raising suspicion for tumor recurrence.
─ The submandibular gland is often involved.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid background.
─ Scant to moderately cellular smear due to fibrosis.
─ Scattered, sometimes tubular, tissue fragments of ductal epithelium.
Nuclei
─ Ductal cells can exhibit significant nuclear enlargement and atypia due to radiation changes.
─ Chromatin may appear smudged or vacuolated.
─ Despite atypia, the changes are focal and lack the widespread features of high-grade malignancy.
Background
─ Scattered lymphoid cells.
─ Fibrous stroma, in which ductal fragments are often embedded.
Absent
─ High cellularity and the presence of many single malignant cells, as seen in carcinoma.
DDx
─ High-Grade Carcinoma (Squamous or Mucoepidermoid): The main differential due to radiation-induced atypia. However, postradiation changes typically result in a paucicellular smear and lack true malignant features.
─ Chronic Sialadenitis: Shares features of fibrosis and acinar atrophy, but postradiation sialadenitis is defined by the history and the characteristic radiation-induced cellular atypia.
Note
─ Knowledge of a prior history of radiation therapy is the crucial clue to correctly interpreting the ductal atypia.
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Sialadenosis
A non-inflammatory, non-neoplastic condition characterized by bilateral, diffuse, and painless enlargement of the salivary glands, typically the parotids, due to hypertrophy and hyperplasia of the acinar cells.
Clinical
─ A rare condition often associated with systemic illnesses like diabetes, malnutrition, or endocrine disorders.
─ Presents as a painless, generalized, often bilateral swelling of the glands.
─ Most commonly affects the parotid gland.
Cell Pattern
─ Epithelial proliferations without myoepithelial stromal component.
─ Highly cellular aspirate with variably sized tissue fragments of acinar cells.
─ Crowded or fused grapelike aggregates of hypertrophic acinar cells.
Cytoplasm
─ Acinar cells are enlarged, with well-formed cytoplasmic borders and vacuolated or finely granular cytoplasm.
Nuclei
─ Nuclei remain small and eccentric, similar to normal acinar cells, despite the cellular enlargement.
Background
─ Tissue fragments are often infiltrated by adipose tissue, similar to normal salivary gland.
─ A background of stripped acinar cell nuclei can be seen.
Absent
─ Inflammatory cells and cystic features are absent.
DDx
─ Normal Salivary Gland: Aspirates of normal glands are typically much less cellular and do not show the same degree of acinar hypertrophy.
─ Acinic Cell Carcinoma: ACC lacks the characteristic admixture of fatty tissue and benign ductal structures seen in sialadenosis.
Note
─ Key features are a highly cellular aspirate composed of hypertrophic but bland acinar cells, often with admixed fat, in a clean, non-inflammatory background.
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Branchial Cleft Cyst
A developmental cyst of the lateral neck, believed to arise from remnants of the branchial arches. While not a salivary gland lesion, its proximity to the parotid gland and similar cytologic features to other cystic neck lesions makes it an important differential diagnosis.
Clinical
─ A congenital remnant, often presenting before the third decade of life.
─ Typically occurs as a painless, unilateral swelling along the anterior border of the sternocleidomastoid muscle.
─ Can become secondarily inflamed, presenting as a painful, matted mass.
Cell Pattern
─ Epithelial proliferations with a lymphoid background OR a mixed inflammatory pattern (if inflamed).
─ Anucleated and superficial squamous cells are characteristic.
─ Columnar and ciliated cells are occasionally seen.
Background
─ Cystic debris and macrophages are typical.
─ A background of lymphocytes is common.
─ Platelike cholesterol clefts may be present in the proteinaceous background.
─ Abundant neutrophils are common in secondarily inflamed cysts.
Absent
─ Does not contain the oncocytes of Warthin tumor or the glandular/intermediate cells of mucoepidermoid carcinoma.
DDx
─ Metastatic Cystic Squamous Cell Carcinoma: This is the most important differential diagnosis in an adult. Malignant cells are often, but not always, present. Mild inflammatory atypia in a branchial cleft cyst can be a pitfall.
─ Benign Lymphoepithelial Cyst: Cytologically, these can be indistinguishable from a branchial cleft cyst. Clinical location (parotid gland vs. lateral neck) is the key to differentiation.
Note
─ A lateral neck cyst in an adult must be considered a metastatic lesion until proven otherwise. The diagnosis hinges on finding bland squamous cells in a cystic, lymphoid background without evidence of malignancy.
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Benign Salivary Neoplasms
Pleomorphic Adenoma (Mixed Tumor of Salivary Gland)
The most common benign neoplasm of the salivary glands, characterized by a mixture of three components: epithelial (ductal) cells, myoepithelial cells, and a distinctive myoepithelial-derived stromal matrix.
Clinical
─ Accounts for the majority of benign salivary gland tumors, most often in the parotid.
─ Presents as a slowly growing, well-defined, painless, and moderately firm mass.
─ Mean age is 46 years, with a slight female predominance.
Cell Pattern
─ Epithelial neoplasm with abundant OR scant myoepithelial stromal component.
─ A biphasic population of epithelial (ductal) and myoepithelial cells.
─ Ductal cells form cohesive sheets, tubules, and trabeculae.
─ Myoepithelial cells can be spindle-shaped, plasmacytoid, or stellate and often merge imperceptibly with the stroma.
Cytoplasm
─ Ductal cells have scant, dense cytoplasm.
─ Myoepithelial cells have variable cytoplasm, which can appear dense and homogeneous (plasmacytoid) or wispy.
Nuclei
─ Both epithelial and myoepithelial cells have bland, round to oval nuclei with uniform chromatin and inconspicuous nucleoli.
Background
─ The hallmark is the fibrillary, chondromyxoid stromal matrix.
─ Stroma appears magenta on Romanowsky stains and grey-green on Pap stains, often with a "troll hair" appearance.
Absent
─ Overtly malignant features are absent, although focal atypia or squamous metaplasia can occur and be a pitfall.
DDx
─ Adenoid Cystic Carcinoma (AdCC): AdCC stroma forms distinct, acellular "gum balls" with a sharp interface with the cells, unlike the fibrillary, merging stroma of PA.
─ Basal Cell Adenoma: Lacks the characteristic fibrillary chondromyxoid stroma of PA.
─ Myoepithelioma: Consists almost exclusively of myoepithelial cells and lacks the ductal component and fibrillary matrix.
Note
─ The key to diagnosis is identifying all three components: bland ductal cells, myoepithelial cells, and the classic fibrillary chondromyxoid matrix.
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Basal Cell Adenoma (Salivary Gland)
A benign monomorphic neoplasm composed of uniform basaloid epithelial cells arranged in nests and trabeculae, associated with a scant but distinctive dense, hyaline basement membrane-like stroma.
Clinical
─ A rare tumor, comprising 1-3% of salivary neoplasms.
─ Typically affects older adults (70s) and is more common in females.
─ Most occur in the parotid gland as a circumscribed, movable, solid nodule.
Cell Pattern
─ Epithelial neoplasm with scant myoepithelial stromal component.
─ Often cellular, with cohesive tissue fragments of basaloid cells.
─ The cells form branched, trabecular cords and solid nests.
─ Peripheral palisading of nuclei at the edge of cell groups is a characteristic feature.
Cytoplasm
─ Scant, with indistinct cell borders.
Nuclei
─ The cells are monomorphic (uniform) with small, round to oval nuclei.
─ Chromatin is uniform, and nucleoli are inconspicuous.
Background
─ Characterized by thin cocoons or thick cords of dense, cordlike, metachromatic stroma that tightly surround and interdigitate with the epithelial nests.
─ Acellular, metachromatic stromal "balls" can be seen.
Absent
─ The fibrillary, chondromyxoid stroma of a pleomorphic adenoma is absent.
─ Significant cytologic atypia, pleomorphism, or mitotic activity.
DDx
─ Adenoid Cystic Carcinoma (AdCC): This is the most critical differential. AdCC nuclei are typically more hyperchromatic and angulated, and the stromal "gum balls" are more prominent. Pain or nerve involvement strongly favors AdCC.
─ Cellular Pleomorphic Adenoma: BCA lacks the fibrillary, myxoid stroma and the distinct plasmacytoid myoepithelial cells of PA.
Note
─ Diagnosis relies on recognizing monomorphic basaloid cells with peripheral palisading and their intimate association with dense, hyaline basement membrane material.
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Myoepithelioma (Salivary Gland)
A benign neoplasm composed almost exclusively of cells with myoepithelial differentiation, lacking a significant ductal epithelial component or the characteristic stromal matrix of a pleomorphic adenoma.
Clinical
─ A rare tumor, accounting for about 1.5% of all salivary gland tumors.
─ Occurs in adults, presenting as a slow-growing, painless mass, most often in the parotid gland.
Cell Pattern
─ Epithelial neoplasm with scant myoepithelial stromal component.
─ Moderately cellular aspirate composed of loose, stellate tissue fragments or discohesive single cells.
─ The cells can be of one type or a mixture of spindled, plasmacytoid, epithelioid, or clear cells.
Cytoplasm
─ Variable depending on the cell type; can be dense and homogeneous in plasmacytoid cells or wispy and fibrillary in spindle cells.
Nuclei
─ Generally bland and round to oval; may be eccentric in plasmacytoid cells.
─ Nuclear grooves and intranuclear cytoplasmic inclusions can be present.
Background
─ May be associated with strands of hyaline or myxoid stroma, but not the abundant, fibrillary stroma of a classic PA.
Absent
─ A ductal epithelial component is absent or extremely rare by definition.
─ Marked pleomorphism, necrosis, or frequent mitoses.
DDx
─ Pleomorphic Adenoma (myoepithelial-rich): The distinction can be difficult and depends on identifying a ductal component and/or fibrillary chondromyxoid stroma, which favor PA.
─ Myoepithelial Carcinoma: Distinguished by cytologic atypia, an infiltrative growth pattern, and mitotic activity.
─ Spindle cell neoplasms (e.g., schwannoma, metastatic melanoma): Can be a mimic, often requiring IHC for definitive diagnosis.
Note
─ A nearly pure population of myoepithelial cells (of spindled, plasmacytoid, or other types) without a ductal component is the key to diagnosis.
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Warthin Tumor (Papillary Cystadenoma Lymphomatosum)
A benign cystic neoplasm composed of a bilayered oncocytic epithelium arranged in papillary folds projecting into cystic spaces, all set within a dense lymphoid stroma. It is the second most common benign salivary gland tumor.
Clinical
─ Strongly associated with smoking.
─ Typically presents in older adults (50-70 years), with a male predominance.
─ Almost exclusively occurs in the parotid gland, often in the lower pole (tail).
─ Presents as a slow-growing, soft, doughy, fluctuant, and painless mass.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid background.
─ The aspirate is defined by a classic triad of three components: oncocytes, lymphocytes, and cystic debris.
Cytoplasm
─ Oncocytic cells have abundant, dense, finely granular, eosinophilic cytoplasm with well-defined cell borders.
Nuclei
─ Oncocytic cells have round, centrally located nuclei, often with a prominent, single nucleolus.
Background
─ A characteristic "dirty" or granular, proteinaceous cystic background is classic.
─ A background population of small, mature lymphocytes is present.
Absent
─ The fibrillary stromal matrix of a pleomorphic adenoma is absent.
DDx
─ Lymphoepithelial Sialadenitis (LESA): LESA has hyperplastic ductal cells, not oncocytes, and typically lacks the granular, cystic debris.
─ Oncocytoma: An oncocytoma is a pure population of oncocytes and lacks the lymphoid stroma and cystic debris.
─ Mucoepidermoid Carcinoma (MEC): The intermediate cells of MEC can mimic oncocytes, but MEC lacks the classic triad, and its lymphoid component (when present) is a host response, not an integral part of the tumor.
Note
─ The diagnostic triad of oncocytes, lymphocytes, and a dirty, proteinaceous background is key.
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Oncocytoma (Salivary Gland)
A benign epithelial neoplasm composed exclusively of oncocytes arranged in solid sheets, nests, and trabeculae, lacking a lymphoid stroma or cystic component.
Clinical
─ A rare tumor, typically affecting the elderly (seventh to ninth decades).
─ Most (85-90%) occur in the parotid gland.
─ Presents as a painless, firm swelling.
─ Nodular oncocytosis is a related hyperplastic process that is cytologically indistinguishable.
Cell Pattern
─ Epithelial proliferations and neoplasms without myoepithelial stromal component.
─ Moderately cellular aspirate composed of a pure population of oncocytes.
─ Cells are arranged in variably sized, cohesive tissue fragments, sheets, and clusters.
Cytoplasm
─ Abundant, dense, homogenous, and finely granular eosinophilic cytoplasm with well-defined borders.
Nuclei
─ Uniform, round, centrally located nuclei with a single, prominent nucleolus.
Background
─ The background is typically clean, devoid of the lymphocytes or proteinaceous debris seen in a Warthin tumor.
Absent
─ Lymphoid cells and granular cystic debris are absent.
─ Significant nuclear pleomorphism or mitotic figures are not features.
DDx
─ Warthin Tumor: Oncocytoma lacks the characteristic lymphoid stroma and cystic background of a Warthin tumor.
─ Acinic Cell Carcinoma: Acinar cells have more fragile, finely vacuolated cytoplasm, whereas oncocytes have dense, granular cytoplasm.
─ Salivary Duct Carcinoma: Can have oncocytic features but is distinguished by high-grade malignant nuclei, pleomorphism, and a necrotic background.
Note
─ A pure and clean population of bland oncocytes is the defining feature.
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Sebaceous Lymphadenoma (Salivary Gland)
A rare, benign neoplasm characterized by the presence of sebaceous epithelial islands and ducts set within a prominent lymphoid stroma, similar to a Warthin tumor but with sebaceous instead of oncocytic differentiation.
Clinical
─ A rare tumor, accounting for less than 1% of salivary neoplasms.
─ Typically presents in older adults (50-80 years).
─ Most are found in the parotid gland or periparotid region.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid background.
─ Variably sized, three-dimensional tissue fragments of bland sebaceous cells.
─ Clusters of smaller, basaloid-type cells are often admixed.
Cytoplasm
─ Sebaceous cells have characteristic foamy, finely vacuolated cytoplasm.
Nuclei
─ Sebaceous and basaloid cells have small, bland nuclei.
Background
─ A background of mixed, mature lymphocytes, which may include plasma cells and tingible body macrophages.
Absent
─ Oncocytic cells are generally not a feature.
─ Mitotic figures are rare or absent.
DDx
─ Warthin Tumor: This is the primary differential diagnosis. Sebaceous lymphadenoma is distinguished by the presence of sebaceous cells instead of oncocytes.
─ Lymphadenoma (Nonsebaceous): Lacks the sebaceous differentiation.
─ Mucoepidermoid Carcinoma: While MEC can have clear cells, it lacks the prominent lymphoid stroma and mature sebaceous differentiation.
Note
─ The key to diagnosis is the identification of clusters of cells with distinct sebaceous differentiation within a lymphoid background.
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Mucoepidermoid Carcinoma (Salivary Gland)
The most common primary malignant neoplasm of the salivary glands, composed of a variable mixture of three cell types: mucin-secreting, intermediate, and epidermoid (squamous) cells. Its grade, which dictates prognosis and morphology, ranges from low to high.
Clinical
─ The most common malignant salivary gland tumor in both adults and children.
─ Most often occurs in the parotid gland.
─ Low-grade tumors often present as slow-growing, painless, cystic masses.
─ High-grade tumors are more likely to be solid, grow rapidly, and present with pain or facial nerve palsy.
Cell Pattern
─ Epithelial proliferations without myoepithelial stromal component OR with a lymphoid background.
─ A triphasic population of mucinous, intermediate, and epidermoid cells arranged in cohesive sheets.
Cytoplasm
─ Mucinous cells have delicate, foamy, or vacuolated cytoplasm.
─ Intermediate cells are smaller with scant, dense cytoplasm and high N:C ratios.
─ Epidermoid cells are polygonal with dense, eosinophilic cytoplasm.
Nuclei
─ Low-grade: Nuclei are generally bland and uniform with minimal atypia.
─ High-grade: Exhibit significant nuclear pleomorphism, irregular contours, hyperchromasia, and prominent nucleoli.
Background
─ The background can be clean, cystic with mucinous material (especially in low-grade tumors), or contain a prominent lymphoid infiltrate as a host response.
Absent
─ Significant keratinization (i.e., keratin pearls) is uncommon and favors a diagnosis of squamous cell carcinoma.
Ancillary studies
─ IHC: (+) p63/p40.
─ Mol: Characterized by a *CRTC1*::*MAML2* gene fusion.
DDx
─ Warthin Tumor (cystic variant): Can be mimicked if a lymphoid background is present. MEC is distinguished by the presence of intermediate and true mucinous cells, rather than oncocytes.
─ Chronic Sialadenitis with Metaplasia: Can show mucinous and squamous changes, but lacks the cellularity and atypical intermediate cells of MEC.
─ Squamous Cell Carcinoma: A key differential for high-grade MEC. The definitive presence of mucin-producing cells confirms MEC.
Note
─ Identifying a combination of mucous, intermediate, and epidermoid cells is the key to diagnosis.
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Adenoid Cystic Carcinoma (Salivary Gland)
A malignant neoplasm composed of basaloid cells with myoepithelial differentiation, characterized by a relentless, infiltrative growth pattern, a high propensity for perineural invasion, and late metastasis. It classically features cribriform architecture and acellular stromal globules.
Clinical
─ Often presents as a slow-growing but firm mass, frequently associated with pain, numbness, or facial nerve palsy due to perineural invasion.
─ Typically affects adults between the fourth and sixth decades.
─ Common sites include the parotid, submandibular, and minor salivary glands (especially the palate).
Cell Pattern
─ Epithelial neoplasm with abundant OR scant myoepithelial stromal component.
─ Uniform, basaloid epithelial cells arranged in sheets, tubules, and classic three-dimensional, cribriform (sieve-like) clusters.
─ Cells surround acellular stromal material with a very sharp interface.
Cytoplasm
─ Scant and often indistinct, with a high nuclear-to-cytoplasmic (N:C) ratio.
Nuclei
─ The cells are monotonous, with bland, round to oval or angulated, hyperchromatic nuclei.
─ Chromatin is coarse, and nucleoli are typically indistinct. Pleomorphism and mitoses are rare except in high-grade (solid) variants.
Background
─ The hallmark is the presence of acellular, homogeneous, hyaline stromal "gum balls" or cylinders.
─ This material stains magenta on Romanowsky stains and translucent pale green on Pap stains.
Absent
─ The fibrillary, chondromyxoid stroma of a pleomorphic adenoma is absent.
Ancillary studies
─ IHC: (+) CD117 (c-kit).
─ Mol: Characterized by a *MYB*::*NFIB* gene fusion.
DDx
─ Pleomorphic Adenoma: The stroma of PA is fibrillary and merges with the cells, whereas AdCC stroma is acellular and sharply demarcated.
─ Basal Cell Adenoma: Can be a very difficult distinction. The presence of pain/nerve palsy, more angulated nuclei, and classic round "gum balls" favor AdCC.
─ Polymorphous Adenocarcinoma: Lacks the classic, rigid, perfectly spherical stromal globules seen in AdCC.
Note
─ The combination of bland, monotonous basaloid cells forming cribriform structures around sharply defined, acellular hyaline globules is the classic diagnostic feature.
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Acinic Cell Carcinoma (Salivary Gland)
A malignant epithelial neoplasm that demonstrates serous acinar differentiation, recapitulating the appearance of normal acinar cells but in a disorganized, neoplastic growth pattern. It is typically a low-grade malignancy.
Clinical
─ The second most common malignant salivary gland carcinoma in adults.
─ The vast majority (84%) occur in the parotid gland.
─ Often presents as a slow-growing mass that may have been present for years.
Cell Pattern
─ Epithelial proliferations without myoepithelial stromal component OR with a lymphoid background.
─ Highly cellular aspirate with variably sized tissue fragments and dispersed cells.
─ Cells may form microacinar or rosette-like structures and often adhere to a delicate capillary meshwork.
Cytoplasm
─ Abundant, fragile, and finely granular or vacuolated, reminiscent of zymogen granules.
Nuclei
─ Uniform, round, and often eccentrically placed, similar to normal acinar cells.
─ A single, distinct nucleolus may be visible.
─ Anisonucleosis is generally mild.
Background
─ A characteristic feature is a "frothy" or granular background with numerous stripped bare nuclei due to the fragile cytoplasm.
─ A significant lymphoid component can be present in up to one-third of cases.
Absent
─ Adipose tissue and true ductal structures (unlike normal salivary gland tissue).
─ Significant mitotic activity and necrosis are typically absent.
Ancillary studies
─ IHC: (+) DOG1, (+) NR4A3.
DDx
─ Normal Salivary Gland/Sialadenosis: ACC lacks the organized "bunch of grapes" architecture and the intimate admixture with fat and ducts.
─ Warthin Tumor: When a lymphoid background is present, Warthin is a key differential. However, ACC has cells with vacuolated/granular cytoplasm, not the dense, granular cytoplasm of oncocytes, and lacks the dirty, cystic debris.
─ Oncocytoma: Oncocytes have dense, granular cytoplasm, while acinar cells have more delicate, vacuolated cytoplasm.
Note
─ A highly cellular aspirate of cells with bland, eccentric nuclei and abundant, fragile, granular/vacuolated cytoplasm, often with a background of stripped nuclei, is characteristic.
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Adenocarcinoma, NOS (Salivary Gland)
A malignant glandular neoplasm that, by definition, lacks the specific histologic features that would classify it as another named type of salivary gland carcinoma. It is a diagnosis of exclusion.
Clinical
─ Represents a significant portion (approx. 17%) of salivary gland malignancies.
─ Primarily affects older adults (average age 58).
─ Can range from well-differentiated (low-grade) to poorly differentiated (high-grade).
Cell Pattern
─ Epithelial proliferations without myoepithelial stromal component.
─ Typically presents as a high-grade malignancy.
─ Cells are arranged in three-dimensional tissue fragments, often showing focal glandular or papillary architecture.
Cytoplasm
─ Variable, consistent with glandular differentiation.
Nuclei
─ Overtly malignant features are common, including pleomorphism, anisonucleosis, irregular nuclear contours, and prominent nucleoli.
Background
─ A necrotic or "dirty" background is common, especially in high-grade lesions.
─ Mitotic figures are often present and can be atypical.
Absent
─ Lacks a myoepithelial stromal component.
─ Lacks the specific features of other carcinomas (e.g., the cribriform pattern of AdCC, the mucinous cells of MEC, the acinar differentiation of ACC).
DDx
─ Metastatic Adenocarcinoma: This is a primary differential diagnosis. Clinical history and IHC stains (e.g., TTF-1 for lung, GATA3/GCDFP-15 for breast) are essential to rule out a metastasis.
─ Salivary Duct Carcinoma: SDC is a specific high-grade adenocarcinoma, often with cribriform/papillary patterns and apocrine features, that expresses Androgen Receptor.
─ High-Grade Mucoepidermoid Carcinoma: Can be a mimic, but lacks the mucin-producing cells that would define it as MEC.
Note
─ This is a diagnosis of exclusion for a malignant glandular tumor that cannot be further classified. Ruling out a metastatic lesion is the most critical step.
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Carcinoma Ex Pleomorphic Adenoma (Salivary Gland)
A carcinoma arising from a pre-existing or concurrent pleomorphic adenoma (PA). It is defined by the presence of a malignant epithelial component alongside a benign PA component.
Clinical
─ Typically presents in older adults (sixth and seventh decades), often a decade later than benign PA.
─ A classic history is a long-standing, stable salivary gland mass that undergoes recent rapid growth, becomes painful, or causes facial nerve palsy.
─ Most arise in the parotid gland.
Cell Pattern
─ Epithelial neoplasms with abundant OR scant myoepithelial stromal component.
─ The key feature is a dual population: tissue fragments of a benign pleomorphic adenoma admixed with a frankly malignant carcinoma.
─ The malignant component is often a high-grade adenocarcinoma, such as Salivary Duct Carcinoma or Adenocarcinoma, NOS.
Nuclei
─ The malignant cells show features of high-grade malignancy: increased size, pleomorphism, and prominent nucleoli.
Background
─ Tumor necrosis is a very useful clue for malignant transformation.
─ Mitotic figures, including atypical forms, are often seen in the malignant component.
Absent
─ The malignant component lacks the bland, uniform features of the benign PA.
DDx
─ Pleomorphic Adenoma with Atypia: Atypia in a benign PA is typically focal and lacks the widespread malignant features, necrosis, and high proliferation of a true carcinoma.
─ De Novo High-Grade Carcinoma: Can be indistinguishable if the benign PA component is not sampled on the FNA. The presence of any amount of classic fibrillary chondromyxoid stroma is a key clue to the diagnosis of Ca-ex-PA.
Note
─ The cytologic diagnosis requires identifying both a benign pleomorphic adenoma component and a separate, overtly malignant carcinoma component.
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Salivary Duct Carcinoma
A rare, aggressive, high-grade adenocarcinoma that morphologically resembles ductal carcinoma of the breast, characterized by infiltrative growth and frequent expression of androgen receptors.
Clinical
─ Primarily affects elderly men (peak incidence in the 60s).
─ Presents as a rapidly growing, infiltrative mass, often with pain and frequent facial nerve involvement.
─ Most arise in the parotid gland, and many develop as the malignant component of a Carcinoma ex Pleomorphic Adenoma.
Cell Pattern
─ Epithelial proliferations without myoepithelial stromal component.
─ A high-grade, non-small cell carcinoma.
─ Cells are arranged in irregular, three-dimensional tissue fragments and sheets, which may show cribriform or papillary architecture.
Cytoplasm
─ Cells are medium to large and polygonal with abundant, granular, eosinophilic cytoplasm (apocrine-like or oncocytic-like).
Nuclei
─ Overtly malignant: enlarged and pleomorphic with significant anisonucleosis.
─ Chromatin is often coarse or vesicular with prominent, often large, nucleoli.
Background
─ A "dirty," granular, necrotic background is characteristic.
─ Mitotic figures are common.
Absent
─ Does not have a myoepithelial stromal component.
─ Lacks the mucinous cells of MEC or the bland basaloid features of AdCC.
Ancillary studies
─ IHC: (+) Androgen Receptor (AR), GCDFP-15, and GATA3. Often positive for HER2/neu.
DDx
─ Metastatic Breast Carcinoma: Can be morphologically identical. Clinical history and IHC are critical for distinction.
─ High-Grade Adenocarcinoma, NOS: SDC is distinguished by its characteristic cribriform/comedo-like morphology and its typical IHC profile (especially AR positivity).
─ High-Grade Mucoepidermoid Carcinoma: Lacks the apocrine/oncocytic features and AR expression typical of SDC.
Note
─ This is a high-grade carcinoma resembling breast cancer; expression of Androgen Receptor is a key diagnostic feature.
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Epithelial-Myoepithelial Carcinoma (Salivary Gland)
A rare, generally low-grade malignancy composed of a characteristic biphasic population of inner, small, basaloid ductal cells and an outer layer of larger myoepithelial cells with abundant clear cytoplasm.
Clinical
─ A rare malignancy, accounting for <0.5% of salivary gland neoplasms.
─ Typically presents in the sixth to seventh decades, with a slight female predominance.
─ Most commonly occurs in the parotid gland as a localized, slow-growing, painless mass.
Cell Pattern
─ Epithelial neoplasm with scant OR abundant myoepithelial stromal component.
─ Highly cellular aspirate showing a biphasic population.
─ The two cell types are arranged in tubular, pseudopapillary, or 3D spherical ("gum ball-like") structures.
Cytoplasm
─ Myoepithelial cells have abundant, clear cytoplasm due to glycogen. This cytoplasm is fragile and easily stripped.
─ Ductal cells are smaller and basaloid with scant, dense cytoplasm.
Nuclei
─ Myoepithelial cells have larger, oval nuclei with open chromatin.
─ Ductal cells have small, dark, round nuclei.
─ Atypia is usually low-grade.
Background
─ Stripped bare nuclei from the fragile clear myoepithelial cells are common.
─ Laminated, acellular hyaline stromal cores or globules are often seen, surrounded by the epithelial cells.
Ancillary studies
─ Mol: *HRAS* mutations are common.
DDx
─ Adenoid Cystic Carcinoma (AdCC): AdCC is composed of a monomorphic population of basaloid cells, whereas EMC is distinctly biphasic (basaloid + clear cells).
─ Pleomorphic Adenoma (PA): EMC lacks the characteristic fibrillary, chondromyxoid stroma of PA.
─ Acinic Cell Carcinoma (clear cell variant): ACC lacks the biphasic pattern and the hyaline stromal globules of EMC.
Note
─ The diagnostic hallmark is the biphasic population of small, dark inner ductal cells and larger, clear outer myoepithelial cells, often arranged around hyaline globules.
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Polymorphous Low-Grade Adenocarcinoma (Salivary Gland)
A low-grade malignant neoplasm, occurring almost exclusively in minor salivary glands, that is defined by its combination of cytologic uniformity (bland, monotonous cells) and architectural diversity (polymorphous patterns).
Clinical
─ Second most common intraoral salivary malignancy, typically arising in the minor glands of the palate.
─ Affects adults over a broad age range, with a 2:1 female predominance.
─ Presents as a firm, painless mass.
Cell Pattern
─ Epithelial neoplasm with scant myoepithelial stromal component.
─ Cells are arranged in cohesive 3D clusters with a variety of irregular shapes and patterns (solid, tubular, cribriform, papillary).
Cytoplasm
─ Scant to moderate amount of dense cytoplasm.
Nuclei
─ Characteristically monotonous, with uniform, round to oval nuclei.
─ Chromatin is often vesicular, and small but distinct nucleoli may be present.
Background
─ Metachromatic, hyalinized stromal globules are often seen embedded within the epithelial aggregates.
Absent
─ Mitoses and necrosis are rare, reflecting its low-grade nature.
─ Lacks the rigid, perfectly round stromal spheres of classic AdCC.
─ Lacks the fibrillary chondromyxoid stroma of pleomorphic adenoma.
DDx
─ Adenoid Cystic Carcinoma (AdCC): Both can have stromal globules, but AdCC has more rigid, perfect spheres and tends to be cytologically darker and more angulated. Papillary architecture favors Polymorphous Adenocarcinoma.
─ Pleomorphic Adenoma (PA): Differentiated by the lack of classic fibrillary, chondromyxoid stroma in Polymorphous Adenocarcinoma.
Note
─ A tumor of minor salivary glands showing a variety of architectural patterns but composed of strikingly uniform, monotonous cells is the key to diagnosis.
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Sebaceous Lymphadenocarcinoma (Salivary Gland)
The rare malignant counterpart of a sebaceous lymphadenoma, defined by the presence of a carcinomatous component arising in or alongside a benign sebaceous lymphadenoma.
Clinical
─ An extremely rare tumor, typically arising in the parotid gland or periparotid lymph nodes.
─ Affects older adults (fifth to seventh decades).
─ May arise in the setting of a pre-existing sebaceous lymphadenoma.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid background.
─ Characterized by a dual population: clusters of benign-appearing sebaceous cells admixed with three-dimensional tissue fragments of malignant epithelial cells.
─ Malignant squamous cells may also be present.
Cytoplasm
─ Benign cells have foamy, vacuolated sebaceous cytoplasm.
─ Malignant cells have features consistent with carcinoma (e.g., dense cytoplasm).
Nuclei
─ The malignant component shows high-grade features, including pleomorphism, hyperchromasia, and irregular contours.
Background
─ A prominent lymphoid background is characteristic.
DDx
─ Sebaceous Lymphadenoma: Is distinguished by the complete absence of a malignant epithelial component.
─ High-Grade Mucoepidermoid Carcinoma: Can have clear cells and a lymphoid response, but lacks the distinct benign sebaceous component.
─ Metastatic Carcinoma: A metastatic carcinoma with sebaceous features (e.g., from a skin primary) or a high-grade carcinoma secondarily colonizing a lymph node must be considered.
Note
─ The diagnosis requires the identification of both a benign sebaceous component and a frank carcinomatous component within a lymphoid stroma.
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Lymphoepithelial Carcinoma (Salivary Gland)
A rare, undifferentiated carcinoma intimately admixed with a prominent, non-neoplastic lymphoid infiltrate, morphologically identical to nonkeratinizing nasopharyngeal carcinoma.
Clinical
─ A rare tumor in Western populations but endemic in specific groups (e.g., Inuit, East Asian populations), where it is strongly associated with Epstein-Barr virus (EBV).
─ Typically presents as a firm mass in the parotid gland, often with cervical lymphadenopathy.
Cell Pattern
─ Epithelial proliferations and neoplasms associated with a lymphoid background.
─ Malignant cells are present as single cells and in irregular, syncytial clumps.
─ The epithelial cells are polygonal to spindle-shaped.
Cytoplasm
─ Moderate to scant amount, often with indistinct cell borders.
Nuclei
─ Overtly malignant and high-grade: large, pleomorphic, and vesicular with large, distinct nucleoli.
Background
─ A dense, prominent background of lymphocytes and plasma cells is characteristic and can sometimes obscure the malignant epithelial cells.
─ Necrosis and mitotic figures are common.
DDx
─ Metastatic Nasopharyngeal Carcinoma: Can be cytologically identical. An examination of the nasopharynx is mandatory to exclude a primary lesion there.
─ High-Grade Mucoepidermoid Carcinoma: May be a differential, especially if a squamous component is present, but LEC typically has more prominent lymphoid infiltrate and undifferentiated syncytial appearance.
─ Lymphoma (especially Hodgkin): The large malignant cells can mimic Reed-Sternberg cells, but they will be positive for cytokeratin and negative for lymphoid markers like CD30/CD15.
Note
─ Identifying large, undifferentiated malignant epithelial cells in syncytial clusters within a dense lymphoid stroma is key. Ruling out a nasopharyngeal primary is critical.
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Metastatic Lesions (Salivary Gland)
Malignant tumors that have spread to the salivary glands (most often the parotid) or adjacent lymph nodes from a primary site elsewhere in the body. Metastases, particularly from skin cancers of the head and neck, are a frequent cause of malignancy in the salivary gland region.
Clinical
─ Account for approximately 10% of malignant tumors of the salivary gland region.
─ Most common primaries are squamous cell carcinoma (SCC) and melanoma from the skin of the head and neck.
─ Less common primary sites include lung, breast, and kidney.
─ Often present clinically as a firm salivary gland mass.
Cell Pattern
─ Can be an epithelial proliferation with a lymphoid background (if metastasizing to an intra/periparotid lymph node) OR an epithelial proliferation without a myoepithelial stromal component (if the gland is directly infiltrated or the node is replaced).
─ The cytologic features mimic the neoplasm at its primary site.
Cytoplasm
─ Highly variable depending on the primary tumor (e.g., dense and keratinizing in SCC; vacuolated in adenocarcinoma; clear in renal cell carcinoma; pigmented in melanoma).
Nuclei
─ Typically show overt features of malignancy, including pleomorphism, hyperchromasia, irregular nuclear membranes, and prominent nucleoli.
Background
─ A lymphoid background is common if the metastasis is to a lymph node.
─ Necrosis is frequently seen.
Absent
─ Lacks the characteristic features of a primary salivary gland neoplasm (e.g., myoepithelial-derived stroma, specific biphasic patterns).
DDx
─ Primary High-Grade Salivary Gland Carcinoma: This is the most important differential. For example, metastatic SCC must be distinguished from a primary high-grade mucoepidermoid carcinoma or primary salivary SCC. Metastatic renal cell carcinoma can mimic clear cell variants of primary tumors like Acinic Cell Carcinoma or Epithelial-Myoepithelial Carcinoma.
─ Lymphoma: Poorly differentiated carcinomas or melanoma can mimic large cell lymphoma.
Note
─ In an adult with a salivary gland mass, metastasis should always be a primary consideration. A history of a prior malignancy is a critical piece of information, and immunohistochemistry is often essential for diagnosis.
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💉Serous Fluids
Introuction ─ General Concepts
Types of cells
Serous effusions can contain a variety of cells, including mesothelial cells (benign, reactive, or malignant), inflammatory cells (neutrophils, lymphocytes, eosinophils, plasma cells), macrophages (histiocytes), and, in cases of malignancy, tumor cells metastatic to the serous cavity or arising from it (mesothelioma). Other elements like blood, fibrin, and sometimes specific non-cellular materials (e g , psammoma bodies, Curschmann's spirals) can also be present.
Benign Mesothelial cells
Mesothelial cells are the normal lining cells of serous cavities (pleura, peritoneum, pericardium). In effusions, benign mesothelial cells are commonly seen and represent exfoliated native lining cells, which may or may not show reactive changes.
Clinical
─ Presence of benign mesothelial cells is a normal finding in serous fluid samples
─ They can increase in number and show reactive changes in response to various stimuli (inflammation, infection, irritation, systemic disease, malignancy elsewhere not directly involving the serosa)
Cytology
─ Cells are usually seen singly or in small, flat, monolayered sheets or loose clusters; "windows" or clear spaces between adjacent cells are characteristic, formed by their long microvilli
─ Cytoplasm is moderate to abundant, pale, dense, or finely vacuolated, often with a "two-tone" appearance (denser endoplasm, paler ectoplasm or "lacy skirt"); cell borders are generally well-defined
─ Nuclei show round to oval features, typically centrally located (but can be eccentric), with smooth nuclear membranes; chromatin is finely granular and evenly distributed; nucleoli are usually small and inconspicuous, but can become more prominent in reactive states
─ Background shows often clean or may contain a sparse population of inflammatory cells
─ Absence of significant atypia, large complex three-dimensional clusters, or features of malignancy
Ancillary studies
─ IHC (+): Calretinin (nuclear and cytoplasmic), WT1 (nuclear, especially in peritoneal and pleural mesothelial cells), CK5/6 (cytoplasmic), Podoplanin (D2-40, membranous), EMA (epithelial membrane antigen, often membranous but can be cytoplasmic; reactive cells may be weaker or patchy compared to mesothelioma), Desmin (often positive in reactive mesothelial cells)
─ IHC (-): Carcinoma markers such as CEA (monoclonal), MOC31, Ber-EP4, TTF-1, Napsin A, PAX8 (except in some Mullerian inclusions or Walthard nests which can be PAX8+)
DDx
─ Reactive mesothelial cells (show more pronounced atypia, see below)
─ Malignant mesothelioma (shows overt malignant features, see specific entry)
─ Adenocarcinoma (forms true glands, expresses carcinoma markers, negative for most mesothelial markers)
─ Histiocytes/Macrophages (kidney-bean shaped nuclei, foamy cytoplasm, CD68/CD163 positive, negative for keratins and most mesothelial markers)
Prognosis
─ Finding only benign mesothelial cells is consistent with a benign effusion or an effusion not directly involved by malignancy; the underlying cause of the effusion dictates prognosis
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Reactive mesothelial cells
Mesothelial cells that exhibit cytologic atypia due to irritation, inflammation, or other stimuli, but lack definitive features of malignancy. Distinguishing florid reactive changes from well-differentiated malignant mesothelioma can be challenging.
Clinical
─ Seen in response to a wide variety of conditions including infections (pneumonia, peritonitis), inflammation (e g , pancreatitis, collagen vascular diseases like SLE or rheumatoid arthritis), pulmonary embolism/infarction, cardiac failure, cirrhosis, uremia, post-surgical or post-radiation changes
─ The presence of reactive mesothelial cells is nonspecific and indicates an underlying pathological process causing the effusion
Cytology
─ Cells are often more numerous than benign resting mesothelial cells, appearing singly, in sheets, or in small to moderately sized clusters, which may sometimes appear three-dimensional or papillary-like; "windows" between cells are usually maintained
─ Cytoplasm is often abundant, dense, eosinophilic or basophilic, and may show vacuolization (fine or large, single or multiple vacuoles); "lacy skirt" ectoplasm may be prominent
─ Nuclei show mild to moderate atypia, including nuclear enlargement (often 2-3x normal), variation in nuclear size (anisonucleosis), binucleation or multinucleation (common); nuclear membranes are usually smooth but can be slightly irregular; chromatin is typically finely granular and evenly distributed, though it can appear more open or slightly coarsened; nucleoli are often prominent, single or multiple, and round (macronucleoli can be seen but are usually smooth)
─ Background shows may contain inflammatory cells (neutrophils, lymphocytes, eosinophils), fibrin, or evidence of the underlying cause (e g , LE cells in lupus, rheumatoid nodules/debris in rheumatoid arthritis)
─ Absence of overt malignant criteria such as very large, complex, berry-like clusters with deep nuclear crowding, significant nuclear membrane irregularity, very coarse chromatin, or bizarre mitotic figures; BAP1 nuclear expression is retained
Ancillary studies
─ IHC (+): Similar to benign mesothelial cells: Calretinin, WT1, CK5/6, Podoplanin (D2-40), EMA (often patchy or weaker than in mesothelioma), Desmin; Ki-67 proliferation index is typically low (<5-10%)
─ IHC (-): Carcinoma markers (CEA, MOC31, Ber-EP4, TTF-1, Napsin A, PAX8); BAP1 expression is retained (loss of nuclear BAP1 is a marker for mesothelioma)
─ Note: Ancillary tests are primarily used to exclude adenocarcinoma or confirm mesothelial origin if atypia is marked, rather than to definitively distinguish reactive from neoplastic mesothelial cells based on IHC alone (BAP1 loss and CDKN2A/p16 FISH are exceptions for diagnosing mesothelioma)
DDx
─ Malignant mesothelioma, epithelioid, well-differentiated (can be very difficult; mesothelioma often shows larger, more complex clusters, more significant atypia, higher Ki-67, and may show BAP1 loss or p16 deletion by FISH)
─ Adenocarcinoma (true gland formation, mucin, positive carcinoma markers, negative for most mesothelial markers)
─ Viral cytopathic effect (e g , herpes, CMV can cause enlarged, atypical cells, but specific viral inclusions should be sought)
Prognosis
─ Depends on the underlying cause of the reactive changes and the effusion
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Histiocytes (Macrophages)
Phagocytic cells of monocytic lineage commonly found in serous effusions, playing a role in inflammation and cleanup of debris. Their appearance can vary depending on what they have phagocytosed.
Clinical
─ Presence is common and usually nonspecific
─ Increased numbers seen in various inflammatory conditions, infections (especially chronic, e g , TB), hemorrhage, or in association with malignancy (tumor-associated macrophages)
─ Can be the predominant cell type in some conditions (e g , resolving inflammation, some granulomatous diseases)
Cytology
─ Cells are typically seen singly, but can form loose aggregates or occasionally small clusters, especially if epithelioid
─ Cytoplasm is usually abundant, pale, grey-blue (Giemsa) or amphophilic (Pap), often finely vacuolated (foamy) or granular; may contain phagocytosed material such as red blood cells (erythrophagocytosis), hemosiderin (golden-brown pigment), lipids, cellular debris, or microorganisms; cell borders are often indistinct
─ Nuclei show typically eccentric placement, often kidney-bean shaped (reniform) or oval, with smooth nuclear contours; chromatin is usually fine and vesicular; nucleoli are generally inconspicuous or small; multinucleated forms (giant cells) can be seen, especially in granulomatous inflammation or foreign body reactions
─ Background shows varies depending on the cause of the effusion; may be clean, inflammatory, or hemorrhagic
─ Absence of epithelial features (cohesive clusters with distinct cell junctions, keratinization, true gland formation); absence of mesothelial features ("windows", two-tone cytoplasm, calretinin/WT1 positivity)
Ancillary studies
─ IHC (+): CD68 (cytoplasmic, granular), CD163 (more specific for M2 macrophages), Lysozyme
─ IHC (-): Cytokeratins (AE1/AE3, CAM5.2), Calretinin, WT1, TTF-1, Napsin A, S100 protein (except Langerhans cells or some other histiocytic disorders)
DDx
─ Mesothelial cells (especially reactive or degenerated ones with vacuolated cytoplasm; mesothelial cells are CK, calretinin, WT1 positive)
─ Adenocarcinoma, signet ring cell or clear cell type (malignant nuclear features, mucin positive, specific carcinoma markers positive)
─ Melanoma (if pigment is present; melanoma cells are S100/SOX10/melanocytic markers positive)
─ Langerhans cell histiocytosis (Langerhans cells have characteristic grooved nuclei, S100/CD1a/Langerin positive)
─ Malignant lymphoma, large cell types (malignant lymphoid features, CD45 and specific lymphoid markers positive)
Prognosis
─ Presence of histiocytes itself is not prognostic; prognosis depends on the underlying condition causing their accumulation
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🍦Soft Tissue
Well-Differentiated Fat Tissue Fragments With or Without Spindle Cell Component (Soft Tissue Pattern 1)
Cytology
─ Predominantly mature, well-differentiated adipose tissue fragments
─ May have an admixed spindle cell, fibrous, or skeletal muscle component
─ Fat necrosis with macrophages and inflammatory cells may be present
─ Variable vascularity, from simple capillaries to complex "chicken-wire" networks
DDx
─ Benign
─ Lipoma
─ ─ Fragments of uniform, mature adipocytes with bland peripheral nuclei
─ Spindle Cell Lipoma
─ ─ Mature adipose tissue admixed with bland spindle cells in a collagenous or myxoid matrix
─ Malignant
─ Atypical Lipomatous Tumor / Well-Differentiated Liposarcoma (ALT/WDL)
─ ─ Atypical, enlarged, and hyperchromatic adipocytic nuclei; may have lipoblasts
─ ─ Key feature is a complex, "chicken-wire" network of capillaries
Note
─ The key diagnostic challenge is distinguishing benign lipoma from ALT/WDL
─ ALT/WDL is positive for MDM2 and CDK4 by IHC and shows 12q15 amplification by FISH
─ The spindle cells in spindle cell lipoma are characteristically CD34 positive
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Spindle or Round Cell Tissue Fragments With Myxoid Mesenchymal Matrix (Soft Tissue Pattern 2)
Cytology
─ Spindle and/or round cells in a myxoid matrix
─ Cellularity is variable
─ Dispersed single cells and inflammatory cells may be present
─ Vascular pattern is a key diagnostic feature (branched, curvilinear, or absent)
DDx
─ Benign
─ Nodular Fasciitis
─ ─ Plump, reactive spindle/stellate cells ("tissue culture" appearance), mitoses, inflammatory background
─ Intramuscular Myxoma
─ ─ Paucicellular with bland spindle cells in an abundant, hypovascular myxoid stroma
─ Malignant
─ Myxoid Liposarcoma
─ ─ Round/spindle cells, lipoblasts, and a characteristic branched, "chicken-wire" vascular network
─ Myxofibrosarcoma
─ ─ Pleomorphic spindle/multinucleated cells and prominent curvilinear vessels
─ Low-Grade Fibromyxoid Sarcoma
─ ─ Bland spindle/oval cells in a mix of myxoid and collagenized stroma; curvilinear vessels
─ Malignant Peripheral Nerve Sheath Tumor (MPNST)
─ ─ Wavy or C-shaped nuclei, fibrillary background; may show heterologous elements
Note
─ Clinical correlation is key, especially for nodular fasciitis (rapid growth and regression)
─ The vascular pattern is a critical feature for distinguishing different myxoid tumors
─ Molecular testing is diagnostic for certain entities (e.g., FUS-DDIT3 for myxoid liposarcoma)
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Spindle Cell Fascicular or Syncytial Tissue Fragments With or Without Dispersed Cells and/or Nuclei (Soft Tissue Pattern 3)
Cytology
─ Cohesive fragments of spindle cells (fascicular or syncytial)
─ Variable number of dispersed single cells and stripped nuclei
─ Lacks a myxoid matrix
─ Cytologic features range from bland to overtly malignant
DDx
─ Benign
─ Schwannoma
─ ─ Hyper- and hypocellular fragments ("Antoni A/B"), nuclear palisades (Verocay bodies), and "old fishnet" pattern
─ Fibromatosis (Desmoid)
─ ─ Bland, uniform spindle cells with tapered cytoplasm in a collagenous matrix
─ Leiomyoma
─ ─ Cohesive syncytial fragments of spindle cells with blunt-ended, "cigar-shaped" nuclei
─ Solitary Fibrous Tumor
─ ─ Bland spindle/oval cells in syncytial fragments, often with dense collagenous stroma
─ Gastrointestinal Stromal Tumor (GIST)
─ ─ Syncytial/fascicular fragments of spindle cells with delicate, filamentous cytoplasm
─ Malignant
─ Leiomyosarcoma
─ ─ Similar to leiomyoma but with increased atypia, mitoses, and necrosis
─ Malignant Peripheral Nerve Sheath Tumor (MPNST)
─ ─ Spindle cells with wavy, C-shaped, or angulated nuclei; may have fibrillary background
─ Synovial Sarcoma
─ ─ Monomorphic small spindle cells in cohesive, branching fragments with embedded vessels
─ Fibrosarcoma
─ ─ Overlapping spindle cells in fascicles ("herringbone" pattern)
─ Sarcomatoid Carcinoma / Spindle Cell Melanoma
─ ─ Must be excluded; requires clinical history and IHC
Note
─ This pattern has a broad DDx requiring IHC and sometimes molecular for definitive diagnosis
─ Key IHC Markers:
─ Schwannoma/MPNST: S100 positive
─ Leiomyoma/Leiomyosarcoma: Desmin and SMA positive
─ GIST: CD117 (KIT) and DOG1 positive
─ Fibromatosis: Nuclear beta-catenin positive
─ Solitary Fibrous Tumor: CD34 and STAT6 positive
─ Synovial Sarcoma: t(X;18) translocation is diagnostic
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Small Round Cell Tissue Fragments and/or Dispersed Cells Without Myxoid Matrix (Soft Tissue Pattern 4)
Cytology
─ Monotonous population of small round blue cells
─ High cellularity with dispersed cells and small, discohesive groups
─ High N:C ratio, scant cytoplasm
─ Lacks a myxoid matrix; background often bloody or "tigroid"
DDx
─ Ewing Sarcoma / PNET
─ Uniform small cells, fine chromatin; pseudorosettes may be present
─ Rhabdomyosarcoma
─ Embryonal: small cells mixed with larger rhabdomyoblasts in a myxoid background
─ Alveolar: monomorphic small cells resembling lymphocytes
─ Neuroblastoma
─ Small cells with hyperchromatic, carrot-shaped nuclei; rosettes with central neuropil
─ Desmoplastic Small Round Cell Tumor
─ Nests of small round cells in a dense, desmoplastic stroma
─ Lymphoma
─ Completely dispersed monomorphic population with lymphoglandular bodies
Note
─ Definitive diagnosis is not possible on morphology alone and requires ancillary studies
─ Key Ancillaries:
─ Ewing/PNET: CD99 positive; EWS translocation (e.g., t(11;22))
─ Rhabdomyosarcoma: Desmin, Myogenin, MyoD1 positive; PAX-FOXO1 translocation in alveolar type
─ Neuroblastoma: Synaptophysin/Chromogranin positive; N-myc amplification
─ Desmoplastic Small Round Cell Tumor: Polyphenotypic (Keratin, Desmin, WT1 positive); EWS-WT1 translocation
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Pleomorphic Cell Tissue Fragments With or Without Single Cells (Soft Tissue Pattern 5)
Cytology
─ Cohesive fragments and single cells composed of large, pleomorphic cells
─ Typically high-grade malignant features (marked atypia, pleomorphism, mitoses, necrosis)
─ Cell morphology is variable (spindle, polygonal, giant cells)
─ Background may be bloody or myxoid
DDx
─ Benign
─ Pleomorphic Lipoma
─ ─ Adipocytes, spindle cells, and characteristic multinucleated "floret-like" giant cells
─ Malignant
─ Undifferentiated Pleomorphic Sarcoma (UPS)
─ ─ Diagnosis of exclusion; pleomorphic cells without a specific line of differentiation
─ Pleomorphic Liposarcoma
─ ─ High-grade pleomorphic cells with a variable number of lipoblasts
─ Dedifferentiated Liposarcoma
─ ─ Two components: a well-differentiated liposarcoma and a high-grade non-lipogenic sarcoma
─ Pleomorphic Leiomyosarcoma
─ ─ Pleomorphic spindle cells with blunt-ended, "cigar-shaped" nuclei
─ Pleomorphic Rhabdomyosarcoma
─ ─ Pleomorphic cells with rhabdomyoblastic features (tadpole/strap cells, eosinophilic cytoplasm)
─ Malignant Melanoma / Sarcomatoid Carcinoma
─ ─ Must be excluded with IHC; look for melanin pigment or epithelial features
Note
─ IHC is mandatory to subclassify tumors in this pattern
─ Key IHC Markers:
─ UPS: Diagnosis of exclusion (negative for specific lineage markers)
─ Dedifferentiated Liposarcoma: MDM2 and CDK4 positive
─ Rhabdomyosarcoma: Myogenin and MyoD1 positive
─ Carcinoma/Melanoma: Keratin/P40 (carcinoma) or S100/SOX10 (melanoma) positive
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Dispersed Epithelioid or Polygonal Cells With or Without Tissue Fragments (Soft Tissue Pattern 6)
Cytology
─ Predominantly dispersed single epithelioid or polygonal cells
─ Cellularity is variable
─ Cytology is variable; cells often mimic carcinoma or melanoma
─ Background may be bloody, granular, or myxohyaline
DDx
─ Benign
─ Granular Cell Tumor
─ ─ Uniform cells with abundant, granular cytoplasm and indistinct borders
─ Malignant
─ Epithelioid Sarcoma
─ ─ Polygonal cells with rhabdoid features, eccentric nuclei; often has an inflammatory/granulomatous background
─ Angiosarcoma
─ ─ Epithelioid/polygonal cells with prominent nucleoli; look for intracytoplasmic lumina with RBCs
─ Epithelioid Hemangioendothelioma
─ ─ Epithelioid cells with mild pleomorphism, nuclear grooves, and intracytoplasmic lumina; myxohyaline stroma
─ Metastatic Carcinoma
─ ─ Must be excluded; requires clinical history and IHC
─ Metastatic Melanoma
─ ─ Must be excluded; look for pigment, macronucleoli, and pseudoinclusions
Note
─ Most entities in this pattern mimic carcinoma or melanoma, making IHC essential for diagnosis
─ Key IHC Markers:
─ Granular Cell Tumor: S100 positive
─ Vascular Tumors (Angiosarcoma, EHE): CD31, CD34, FLI-1 positive
─ Epithelioid Sarcoma: Keratin/EMA positive, CD34 positive, loss of INI1
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🦋Thyroid
Inflammatory Cells Predominate (Thyroid Pattern 1)
Cytology
— Smear is predominated by inflammatory cells
— Variable follicular cell atypia or degeneration may be present
— Background may contain debris, colloid, or necrosis
DDx
— Suppurative Thyroiditis
— —Numerous neutrophils, high cellularity, obscured colloid
— De Quervain Thyroiditis (Subacute Granulomatous)
— —Plentiful large multinucleated giant cells, "dirty" background, degenerate follicular sheets
— Mycobacterial Thyroiditis
— —Epithelioid granulomas, Langhans cells, caseating necrosis
— Chronic Lymphocytic (Hashimoto) Thyroiditis
— —Heterogeneous lymphocytes, oncocytic "Askanazy" cells, lymphoepithelial lesions
— Lymphoma (MALT, small/large cell)
— —Monotonous lymphoid population
— Other malignancies with inflammation
— —Anaplastic or papillary carcinoma can have a prominent inflammatory component
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Cystic Background With Evidence of Old Hemorrhage (Thyroid Pattern 2)
Cytology
— Low cellularity (except for macrophages)
— Thin colloidal background with debris and hemorrhage
— Plentiful macrophages and siderophages
— Scattered follicular or oncocytic sheets may be present
— Atypia in regenerative cyst-lining cells can occur
DDx
— Benign Cyst (in a follicular or colloid nodule)
— —Lacks features of malignancy
— Cystic Papillary Carcinoma
— —More epithelial material; papillary architecture, nuclear grooves/inclusions
— Cystic Parathyroid Tumor
— —High PTH level in cyst fluid
— Metastatic Carcinoma
— —IHC on cell block is key (e.g., ER for breast, CDX2 for colon)
Note
— "Cyst fluid only" without epithelium is considered non-diagnostic by TBS
— Repeat FNA is mandatory if there is clinical/radiologic concern or incomplete drainage
— Marked atypia in cyst-lining cells can lead to an AUS diagnosis
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Predominant Thin Colloid With Scant Follicular Epithelial Sheets: Colloid Nodule (Thyroid Pattern 3)
Cytology
— Very low cellularity
— Abundant thin colloid (may show cracking, bubbling, or a "varnish" sheen)
— Scant or absent follicular epithelium (benign honeycomb sheets)
— Scant or absent bare follicular nuclei
— Occasional macrophages and siderophages if cystic
DDx
— Colloid Nodule
— —Stereotypical lesion for this pattern
— Benign Follicular Nodule
— —More cellular with more prominent follicular sheets
Note
— Considered adequate by TBS even if acellular due to the diagnostic colloid
— Follicular neoplasms and papillary carcinoma typically lack abundant thin colloid
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Follicular Tissue Fragments and Larger Fragments in Which Fibrovascular Strands Separate Follicles of Varying Size, in a Background of Usually Abundant Thin Colloid (Thyroid Pattern 4)
Cytology
— Mild to high cellularity
— Cohesive sheets of follicular epithelium (honeycomb pattern)
— Large fragments with follicles of varying size separated by stroma
— Abundant thin and some thick colloid
— Siderophages and macrophages common (cystic change)
— Stripped (bare) follicular nuclei often present
DDx
— Benign Follicular Nodule / Multinodular Goiter
— —Stereotypical lesion for this pattern
— Graves' Disease (Hyperplasia)
— —High cellularity, "fire flares" (marginal colloid)
— Follicular Neoplasm
— —More cellular, predominantly microfollicular, scant colloid
— Papillary Carcinoma
— —Lacks papillary nuclear features (grooves, pseudoinclusions)
Note
— Can be classified as FLUS if focally microfollicular or hypocellular
— Prominent cystic degenerative atypia may also warrant a FLUS diagnosis
— Proliferation markers (Ki67) are not useful in the differential diagnosis
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Epithelial Tissue Fragments Predominantly Microfollicles and Scant Colloid (Thyroid Pattern 5)
Cytology
— Moderate to high cellularity, often bloody background
— Loosely cohesive sheets with a microfollicular architecture
— Nuclear enlargement, pleomorphism, and crowding
— Scant or no colloid
— Few dispersed cells or bare follicular nuclei
DDx
— Follicular Neoplasm (Adenoma vs. Carcinoma)
— —Stereotypical lesion for this pattern
— —Cannot distinguish adenoma from carcinoma on FNA
— Follicular Variant of Papillary Carcinoma (FVPTC)
— —Look for papillary nuclear features (grooves, pale chromatin) and denser cytoplasm
— Parathyroid Tumor
— —Smaller nuclei, granular chromatin, no colloid; confirm with PTH assay
— Benign Follicular Nodule
— —Has more colloid and fragments with variable follicle sizes (macro- and micro-)
Note
— Correlates with Bethesda category IV (Follicular Neoplasm)
— May be classified as FLUS if pattern is focal or cellularity is low
— Molecular testing (e.g., PAX8-PPAR-γ, HBME-1) has limited utility
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Epithelial Tissue Fragments With Granular Cytoplasm and Scant or No Colloid (Thyroid Pattern 6)
Cytology
─ Moderate to high cellularity
─ Sheets and dispersed oncocytic (Hürthle) cells
─ Cells are polygonal with abundant, dense, granular cytoplasm
─ Nuclei are round to oval with prominent, single, large nucleoli
─ Scant or no colloid; often a bloody background
─ Cystic degeneration is common (siderophages)
DDx
─ Oncocytic Neoplasm (Hürthle Cell Adenoma or Carcinoma)
─ ─ Stereotypical lesion for this pattern; cannot distinguish adenoma vs. carcinoma
─ Oncocytic Variant of Papillary Carcinoma
─ ─ Look for nuclear grooves and pseudoinclusions
─ Hashimoto Thyroiditis
─ ─ Has a prominent lymphocytic infiltrate and Askanazy cells typically lack macronucleoli
─ Medullary Carcinoma
─ ─ Cells are more pleomorphic (spindled, plasmacytoid), have salt-and-pepper chromatin, and may have amyloid
─ Metastatic Carcinoma (e.g., Renal Cell Carcinoma)
─ ─ IHC is key for diagnosis (e.g., RCC(+), TTF-1(-))
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Epithelial Tissue Fragments With Well-Defined Cytoplasm, Nuclear Grooves and Pseudoinclusions, and Variable Papillary Tissue Fragments and Variable Colloid (Thyroid Pattern 7)
Cytology
─ Highly cellular smear
─ Papillary fragments with fibrovascular cores
─ Crowded sheets with nuclear overlapping
─ Well-defined, dense (often "squamoid") cytoplasm
─ Nuclear features: oval shape, grooves, pseudoinclusions, irregular membranes, pale/powdery chromatin
─ Variable colloid, which can be thick and "stringy" ("bubble gum" colloid)
─ Psammoma bodies and multinucleated giant cells may be present
DDx
─ Papillary Carcinoma (Classic and variants)
─ ─ Stereotypical lesion for this pattern
─ Hyalinizing Trabecular Tumor
─ ─ Frequent nuclear pseudoinclusions but bland nuclei, trabecular architecture, and no true papillary fragments
─ Follicular Variant of Papillary Carcinoma
─ ─ Presents with a microfollicular pattern but has the classic nuclear features
─ Medullary Carcinoma
─ ─ Has "salt-and-pepper" chromatin, amyloid, and lacks true papillary features
Note
─ Diagnosis requires multiple features; nuclear pseudoinclusions alone are not sufficient
─ Molecular testing (e.g., BRAF) can be helpful, as it is common in classic PTC
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Predominantly Single Cells and Epithelioid or Spindle Cells (Thyroid Pattern 8)
Cytology
─ Dispersed single cells, loosely cohesive groups, or syncytial fragments
─ Cells can be epithelioid, spindled, plasmacytoid, or bizarre
─ Marked nuclear pleomorphism, hyperchromasia, coarse chromatin, and mitoses
─ Background may show necrosis and inflammation
─ Colloid is typically absent
DDx
─ Anaplastic Carcinoma
─ ─ Large, bizarre, pleomorphic, and spindled cells; background of necrosis and neutrophils
─ Medullary Carcinoma
─ ─ Plasmacytoid or spindled cells, "salt-and-pepper" chromatin, amyloid
─ Poorly Differentiated Carcinoma
─ ─ Monotonous cells in "insular," trabecular, or solid patterns; high N:C ratio
─ Metastatic Tumors
─ ─ Melanoma, lobular breast carcinoma, or RCC can present with a dispersed pattern; IHC is crucial
─ Lymphoma
─ ─ Monotonous population of atypical lymphoid cells
Note
─ This pattern encompasses high-grade malignancies
─ IHC on a cell block is often essential for definitive classification
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Predominantly Single Cells (Thyroid Pattern)
Cytology
— Moderate to high cellularity
— Dispersed pattern of single cells (epithelioid, spindle, or plasmacytoid)
— Some discohesive tissue fragments may be present
— Marked nuclear pleomorphism and atypia
— Background may show necrosis or amyloid
DDx
— Medullary Carcinoma
— —Plasmacytoid, spindle, or polygonal cells
— —"Salt-and-pepper" chromatin, red cytoplasmic granules, amyloid
— Poorly Differentiated Carcinoma
— —Insular or trabecular fragments, high N:C ratio
— —Lacks papillary nuclear features and lacks amyloid
— Anaplastic Carcinoma
— —Bizarre, spindled, and giant tumor cells
— —Necrotic and inflammatory background
— Metastatic Tumor
— —Morphology is "foreign" to the thyroid; reflects primary site
— —Requires clinical history and IHC for confirmation
Note
— Correlates with Bethesda categories V (Suspicious) and VI (Malignant)
— IHC is crucial for differentiation (e.g., Calcitonin for Medullary)
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Oncocytic / Granular Cytoplasm (Thyroid Pattern)
Cytology
— Moderate to high cellularity
— Sheets and dispersed cells with abundant, well-defined granular cytoplasm
— Nuclei are often enlarged, with prominent nucleoli
— Scant or no colloid in the background
— Background may be bloody or show cystic change
DDx
— Oncocytic Neoplasm (Hürthle cell)
— —Stereotypical lesion for this pattern (cells are >90% oncocytic)
— —Polygonal cells with coarse granules, central nuclei with large macronucleoli
— Medullary Carcinoma
— —Eccentric cytoplasm with fine red granules (Giemsa), "salt-and-pepper" chromatin
— —Lacks macronucleoli; amyloid may be present
— Metastatic Carcinoma (e.g., Renal Cell)
— —Morphology is "foreign" to the thyroid; often clear cell features
— —IHC is key for diagnosis (e.g., PAX8+/TTF1- for RCC)
— Oncocytic Variant of Papillary Carcinoma
— —Shows papillary nuclear features (grooves, pseudoinclusions) in an oncocytic background
— Hashimoto Thyroiditis
— —Prominent lymphoid background; oncocytic cells (Askanazy) lack macronucleoli
Note
— Correlates with Bethesda categories V (Suspicious for Malignancy) and VI (Malignant)
— IHC is essential for definitive diagnosis (e.g., Calcitonin, Thyroglobulin, renal markers)
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Non-Diagnostic (Bethesda for Thyroid)
Insufficient for diagnosis due to limited cellularity, obscuring factors, or poor preservation
Clinical ─ Not applicable for this category in terms of patient specifics; specimen may be re-aspirated
Cytology
Cells
─ Scant or poorly visualized
─ Or mostly cyst macrophages
─ Fewer than six groups of well-preserved follicular cells
─ Each group having at least ten cells
Cytoplasm
─ Obscured by blood or artifact
─ Or poorly preserved
Nuclei
─ Show obscuring artifact or degeneration
─ Or are too few to assess
Background
─ Shows mostly blood
─ Or thick colloid obscuring cells
─ Or preparation artifact
─ Or cyst fluid only
Absent
─ Adequate well-preserved follicular epithelium for evaluation
Ancillary studies
─ Molecular: Not typically performed
DDx
─ Cyst fluid from a benign nodule (if cyst macrophages only, but no epithelium)
─ True aspiration of a sparsely cellular benign nodule (sampling error vs actual lesion)
─ Technical issues (poor smear, fixation, obscuring blood)
Note
─ Repeat FNA, preferably ultrasound-guided, is recommended
─ Exceptions: abundant colloid only, or inflammation consistent with thyroiditis, may be diagnostic
─ Criteria: < 6 groups of 10 well preserved follicular cells each
─ Or cyst fluid only (with/without histiocytes)
─ Other examples: poorly prepared/stained smears
─ Significantly obscured follicular cells
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Benign (Bethesda for Thyroid)
Encompasses a group of non-neoplastic thyroid conditions; specific entities detailed below
Clinical ─ Overall risk of malignancy (ROM) for benign category is ~5-15%; follow-up is typically clinical and/or ultrasound
Note ─ Specific features, ancillary studies, and DDx are best considered for each sub-entity
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Follicular Nodular Disease (FND) (Adenomatoid Nodule, Colloid Nodule)
Benign proliferation of follicular cells forming nodules with colloid; includes colloid-rich adenomatoid nodules and more cellular ones (aka colloid nodule, hyperplastic nodule, adenomatous nodule, benign follicular nodule)
Clinical ─ Common cause of thyroid nodules; usually euthyroid; may be solitary or multiple in multinodular goiter
Cytology
Cells
─ Follicular cells present
─ Arranged in flat honeycomb sheets (monolayered)
─ Or arranged in macrofollicles
─ Occasionally 3D but retain polarity
─ Minimal crowding or overlapping observed
─ Oncocytes (Hürthle cells) can be present
Cytoplasm
─ Follicular cells: moderate amount, clear to granular
─ Follicular cells: delicate, ill-defined cell borders
─ Oncocytes: abundant, dense, eosinophilic
Nuclei
─ Round to oval shape, monomorphic appearance
─ Uniform finely granular chromatin
─ Smooth nuclear contours
─ Slight anisonucleosis allowed
─ Nucleoli inconspicuous or absent
─ Oncocyte nuclei: central, round
─ Oncocyte nucleoli: prominent
─ Oncocytes: +/- large cell dysplasia
Background
─ Abundant colloid present
─ Colloid may be watery, forming folds/lacunae
─ Or colloid may be thick, with hyaline quality
─ "Stained-glass cracking" appearance of colloid
─ Cyst macrophages common
─ +/- Hemosiderin or lipofuscin pigment
─ +/- Papillary hyperplasia
Absent
─ Significant nuclear atypia (no PTC features)
─ True papillae
─ Psammoma bodies
─ Predominant microfollicular pattern
Ancillary studies
─ IHC (+): Thyroglobulin (can confirm follicular origin if needed)
DDx
─ Follicular neoplasm/AUS (more cellular, microfollicles, scant/absent colloid, nuclear crowding)
─ Papillary thyroid carcinoma, follicular variant (PTC nuclear features present, even if focal)
─ Nondiagnostic aspirate (FND requires adequate cellularity and/or colloid)
Note
─ Spectrum from colloid-rich (macrofollicular) to more cellular (normofollicular) nodules
Graves' Disease
Autoimmune disorder causing hyperthyroidism due to diffuse thyroid hyperplasia
Clinical ─ Hyperthyroidism symptoms (tachycardia, tremor, exophthalmos); diffuse goiter; typically young to middle-aged women
Cytology
Cells
─ Follicular cells often hypercellular
─ Arranged in flat sheets or loosely cohesive groups
─ Typically not hypercellular (can be variable)
Cytoplasm
─ Abundant, foamy, pale
─ Finely vacuolated or granular
─ "Fire flares" (marginal vacuolization/scalloped colloid at cell edges)
Nuclei
─ Round to oval shape
─ Often enlarged & vesicular but smooth contours
─ Finely granular chromatin
─ Nucleoli can be prominent
Background
─ Variable colloid, often scant and watery
─ Lymphocytes usually not prominent
─ If lymphocytes present, grooves and chromatin clearing are non-diffuse
Absent
─ Definitive PTC nuclear features
─ True papillae
DDx
─ Cellular FND (less atypia, no fire flares usually)
─ Papillary thyroid carcinoma (PTC nuclear features, true papillae if present)
─ Toxic adenoma (FNA may be similar; clinical/scan correlation)
Note
─ Cytologic features can overlap with other hyperplastic states
─ Diagnosis relies heavily on clinical context
─ Treated Graves' may show prominent microfollicular architecture
─ Treated Graves': nuclear overlapping/crowding, considerable anisonucleosis
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Thyroiditis
Inflammation of the thyroid gland, includes autoimmune and other etiologies
Hashimoto Thyroiditis (Chronic Lymphocytic Thyroiditis)
Autoimmune disease leading to thyroid destruction and often hypothyroidism
Clinical ─ Common cause of goiter and hypothyroidism; often middle-aged women; increased risk of PTC and lymphoma
Cytology
Cells
─ Mixed population present
─ Polymorphic lymphoid cells
─ Benign follicular cells
─ Hürthle cells (oncocytes)
─ Lymphocytes (varied stages), plasma cells
─ Occasional multinucleated giant cells
Cytoplasm
─ Follicular: scant to moderate
─ Hürthle cells: abundant, granular, eosinophilic
─ Lymphoid cells: scant to moderate
Nuclei
─ Follicular: round, some size variation
─ Hürthle cells: large, round, can show atypia
─ Hürthle cell nucleoli: prominent
Background
─ Prominent lymphoid infiltrate
─ (Lymphocytes, plasma cells, tangible body macrophages)
─ Colloid often scant or absent
─ Germinal center fragments possible
Absent
─ Definitive PTC features in follicular cells
─ Sheets of atypical lymphoid cells (unlike lymphoma)
Ancillary studies
─ IHC: If lymphoma suspected, lymphoid markers (CD45, CD20, CD3, light chains) useful
DDx
─ Lymphoma (monomorphic atypical lymphoid population; consider flow cytometry/IHC if suspicious)
─ Papillary thyroid carcinoma, esp Warthin-like variant (true PTC nuclear features)
─ Hürthle cell neoplasm (predominance of Hürthle cells without significant lymphoid infiltrate)
Note
─ Hürthle cell atypia can be marked but is usually benign in this context
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Subacute (Granulomatous, De Quervain) Thyroiditis
Self-limited thyroid inflammation, often post-viral, causing thyroid pain
Clinical ─ Painful, tender thyroid; fever; transient hyperthyroidism then hypothyroidism, then recovery
Cytology
Cells
─ Multinucleated giant cells, often engulfing colloid
─ Epithelioid histiocytes forming granulomas
─ Follicular cells, may be degenerated or reactive
─ Mixed inflammatory cells
─ Early: many neutrophils and eosinophils
─ Later: hypocellular, scant degenerated follicular cells
Cytoplasm
─ Follicular cells: variable, can show reactive changes
Nuclei
─ Follicular cells: can be reactive, enlarged
─ Giant cells: multiple bland nuclei
Background
─ Colloid, may be scant or engulfed by giant cells
─ Inflammatory cells, cellular debris
Absent
─ PTC nuclear features
─ Extensive fibrosis (unlike Riedel's)
─ Malignant giant cells
─ Involutional stage: absent inflammatory cells and giant cells (often insufficient for eval)
DDx
─ Palpation thyroiditis (milder features, history of recent palpation)
─ Riedel thyroiditis (rare, extensive fibrosis, paucicellular)
─ Anaplastic carcinoma (marked pleomorphism, mitoses, necrosis; giant cells are malignant)
Note
─ FNA can be painful; cytologic features vary with stage of disease
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Acute Suppurative Thyroiditis
Rare bacterial or fungal infection of the thyroid, often in immunocompromised or pre-existing thyroid disease
Clinical ─ Acute onset, fever, severe neck pain, erythema, fluctuance; may form abscess
Cytology
Cells
─ Predominantly neutrophils
─ Few reactive follicular cells
─ Bacteria or fungi may be visible (special stains helpful)
Cytoplasm
─ Follicular cells: may show reactive changes or degeneration
Nuclei
─ Follicular cells: may be reactive or obscured by inflammation
Background
─ Abundant acute inflammatory cells
─ Necrotic debris, fibrin, macrophages, blood
─ Occasionally background bacteria or fungi
Absent
─ Features of granulomatous thyroiditis
─ Typical Hashimoto's features
DDx
─ Anaplastic carcinoma with inflammatory infiltrate (malignant cells present)
─ Abscess from other source fistulizing into thyroid
Note
─ FNA is useful for diagnosis and obtaining material for culture
Riedel Thyroiditis
Rare chronic inflammatory condition characterized by dense fibrosis replacing thyroid parenchyma and extending into adjacent tissues (rarest form of thyroiditis)
Clinical ─ Rock-hard, fixed, painless goiter; compressive symptoms (dysphagia, dyspnea, hoarseness); often associated with IgG4-related disease (manifestation of IgG4-RD); fibrosing in other organs
Cytology
Cells
─ Often scant (paucicellular aspirate) or acellular
─ Few bland spindle cells (fibroblasts)
─ Rare follicular cells or inflammatory cells
Cytoplasm
─ Spindle cells: elongated
─ Follicular cells: may be atrophic
Nuclei
─ Spindle cells: bland, elongated
─ Follicular cell nuclei: small, regular
Background
─ Dense collagenous stroma (collagen strands)
─ May be difficult to aspirate
─ Scattered lymphocytes or plasma cells
Absent
─ Significant atypia
─ Colloid & follicular cells (usually)
─ Features of other thyroiditis types
DDx
─ Fibrosing variant of Hashimoto thyroiditis (more lymphocytes, Hürthle cells)
─ Anaplastic carcinoma (malignant cells, pleomorphism, mitoses)
─ Paucicellular benign nodule (lacks extensive fibrosis)
Note
─ Diagnosis often requires surgical biopsy due to paucicellularity of FNA
Thyroglossal Duct Cyst
Cystic remnant of the thyroglossal duct
Clinical ─ Midline neck mass (anterior midline, below hyoid, above thyroid isthmus), children/young adults; moves with swallowing or tongue protrusion
Cytology
Cells
─ Squamous cells (benign, anucleated, nucleated)
─ Degenerated squamous cells
─ Columnar ciliated respiratory-type cells
─ Mucinous cells
─ Inflammatory cells (macrophages, lymphocytes)
─ +/- Thyroid follicular cells (thyroglobulin + if present)
Background
─ Predominantly proteinaceous material & inflammatory cells
─ Mucoid/proteinaceous material
─ Cholesterol crystals, cellular debris
Ancillary studies
─ IHC: Thyroglobulin (+) if follicular cells present (confirms thyroidal origin of those cells)
DDx
─ Branchial cleft cyst (lateral neck, lacks respiratory/thyroid elements)
─ Cystic metastatic carcinoma (e.g. SCC, PTC; shows malignant features)
─ Dermoid cyst (more adnexal structures, keratin only)
Note
─ Carcinoma (PTC or SCC) can rarely arise within a TGDC
Branchial Cleft Cyst
Cystic remnant of embryonic branchial arches, lateral neck
Clinical ─ Lateral neck mass, anterior to sternocleidomastoid; any age, often young adult
Cytology
Cells
─ Predominantly benign squamous cells
─ (Mature squamous cells and anucleated squames)
─ +/- Columnar ciliated cells (less common than TGDC)
─ Lymphocytes, macrophages
Cytoplasm
─ Variable squamous type
Nuclei
─ Benign squamous features
Background
─ Proteinaceous fluid, cellular debris
─ Cholesterol crystals
─ Often prominent lymphoid component
─ (May include germinal center fragments)
Absent
─ Thyroid follicular cells
─ Significant atypia (unless inflamed or rare carcinoma)
DDx
─ Cystic metastatic squamous cell carcinoma (atypia, necrosis, dyskeratosis)
─ Cystic metastatic papillary thyroid carcinoma (PTC nuclear features, thyroglobulin +)
─ Thyroglossal duct cyst (midline, often respiratory/thyroid elements)
─ Lymphoepithelial cyst of salivary gland (intraglandular, associated salivary tissue)
Note
─ Inflammation can cause reactive squamous atypia; carcinoma can rarely arise
Atypia of Undetermined Significance (AUS) (Bethesda for Thyroid)
Heterogeneous category; cytologic atypia present but not definitive for a benign or malignant diagnosis (atypia insufficient for FN/SFN or Suspicious categories); used sparingly (ideally <7-10% of cases per Bethesda, though rates can vary)
Clinical ─ ROM 10-40%; management involves repeat FNA, molecular testing, or diagnostic lobectomy
Cytology
General pattern
─ Predominantly benign pattern with focal, minor atypia
─ OR features suggestive but not diagnostic of neoplasm/malignancy
─ OR atypia cannot be further classified
Specific patterns often include one or more of the following:
─ AUS with nuclear atypia: Focal nuclear changes suggestive of PTC (e.g., enlargement, pallor, irregular contours, grooves) but not diffuse or classic enough for Suspicious for Malignancy or Malignant; often seen in Hashimoto's thyroiditis (common in patients with Hashimoto's)
─ AUS with architectural atypia: Predominantly microfollicular pattern with scant/absent (minimal) colloid, but cellularity or extent is insufficient for SFN; or crowded, disorganized groups with some nuclear overlap (may represent limited sampling of FN)
─ AUS with oncocytic (Hürthle cell) atypia: Predominantly oncocytic population (sparse, almost exclusively oncocytic) but insufficient cellularity for Hürthle cell neoplasm, or oncocytic cells with some nuclear atypia (e.g., size variation, prominent nucleoli) not meeting criteria for Suspicious for Hürthle Cell Neoplasm; often in Hashimoto's or multinodular goiter; minimal colloid
─ AUS with atypia of cyst lining cells: Cyst lining cells (reparative follicular cells &/or mesenchymal cells) show some nuclear atypia (elongation, grooves, prominent nucleoli, "pulled-out" cytoplasm, rare INPIs) often due to reparative changes, but malignancy cannot be excluded
─ Atypia, not otherwise specified (NOS): Atypia that does not fit neatly into the above patterns (e.g., psammoma bodies with scant bland cells; extensive Hürthle cell change in a sparsely cellular aspirate with some atypia)
Cells
─ Follicular or oncocytic (Hürthle cells)
─ Atypia is the defining feature but is limited in extent or degree
Cytoplasm
─ Variable; may be scant (microfollicles)
─ Or abundant and granular (oncocytic atypia)
Nuclei
─ Show mild to moderate changes:
─ Slight enlargement, contour irregularities
─ Chromatin clearing/pallor, or small grooves
─ Nucleoli may be visible but not overtly malignant
Background
─ Variable; may have scant colloid (esp with microfollicular pattern)
─ Or cystic changes
Absent
─ Definitive features of papillary carcinoma
─ (e.g., widespread, classic nuclear changes, true papillae, pseudoinclusions)
─ Definitive features of medullary carcinoma, or anaplastic carcinoma
Ancillary studies
─ Molecular: May be useful for risk stratification (e.g., ThyroSeq, Afirma GSC); presence of high-risk mutations (BRAF V600E, TERT) increases ROM
DDx
─ Benign follicular nodular disease (FND) (AUS has more concerning atypia or microfollicular architecture)
─ Follicular Neoplasm/Suspicious for Follicular Neoplasm (SFN) (AUS has less extensive microfollicular pattern or less crowding/overlap)
─ Non-invasive Follicular Thyroid Neoplasm with Papillary-like Nuclear Features (NIFTP) (AUS may have focal PTC-like nuclear changes but not diffuse or convincing enough)
─ Papillary Thyroid Carcinoma (PTC) (AUS lacks definitive or widespread PTC nuclear features)
Note
─ This category should prompt further investigation due to the increased ROM compared to benign
─ Subclassification into patterns of atypia can be helpful for management discussions and guiding molecular testing
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Follicular Neoplasm / Suspicious for a Follicular Neoplasm (SFN) (Bethesda for Thyroid)
Cytologic features suggestive of a follicular neoplasm (follicular adenoma or follicular carcinoma); definitive distinction requires histologic examination of capsule/vascular invasion
Clinical ─ ROM ~15-45%; diagnostic lobectomy is usual management
Cytology
Cells
─ Follicular, uniform, highly cellular
─ Arranged predominantly in microfollicular pattern (mc)
─ Microfollicles: flat or 3D groups
──── Circumference < 15 cells
──── In circle > 2/3 complete
──── Crowding & overlapping
──── Or arranged in crowded/trabecular, or solid pattern
─ Single cells infrequent
Cytoplasm
─ Scant to moderate, often ill-defined borders
Nuclei
─ Round to oval shape, normal size or some enlargement
─ Mild hyperchromasia, crowding/overlapping
─ Chromatin may be granular or clumpy (mild hyperchromasia)
─ Nucleoli usually inconspicuous or absent
Background
─ Scant or absent colloid
─ Stripped nuclei may be present
Absent
─ Definitive PTC nuclear features (though some overlap with FVPTC/NIFTP)
─ For potential NIFTP/FVPTC: nuclei larger, irregular contours/grooves, chromatin clearing
─ Lack true papillae, absent or very rare INPI
─ Significant oncocytic change (>75%)
─ Multinucleated cells
Ancillary studies
─ Molecular: May help in risk stratification; RAS mutations common
DDx
─ Cellular follicular nodular disease (FND) (SFN is more cellular, more microfollicular, less colloid)
─ AUS with architectural atypia (SFN shows more extensive and convincing neoplastic features)
─ Papillary thyroid carcinoma, follicular variant (FVPTC) or NIFTP (SFN lacks clear PTC nuclear features; however, this is a major area of diagnostic challenge and overlap)
─ Parathyroid lesions (can mimic follicular lesions; GATA3+, PTH+, thyroglobulin-)
Note
─ The term SFN is preferred over "follicular lesion" by Bethesda as it implies a higher likelihood of neoplasm
─ Cystic degeneration is uncommon
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Parathyroid lesions (DDx for Follicular Neoplasm)
Clinical ─ Hypercalcemia
Cytology
Cells
─ Crowded, overlapping
─ In microfollicular arrangement
─ Triangular clusters (aka “wedge pattern”)
Nuclei
─ Salt and pepper chromatin
Background
─ Colloid absent
Ancillary studies
─ IHC (+): GATA3, PTH (confirmatory)
─ IHC (-): Thyroglobulin, TTF-1 Note
─ PTH in the needle washout elevated
Follicular Neoplasm – Oncocytic (Hürthle Cell Neoplasm / Suspicious for Hürthle Cell Neoplasm)
Neoplasm composed predominantly (>75%) of oncocytic (Hürthle) cells; distinction between Hürthle cell adenoma and carcinoma requires histologic assessment of invasion
Clinical ─ ROM ~10-40% for Hürthle cell neoplasms; management usually surgical
Cytology
Cells
─ Almost exclusively (>75%) oncocytic (Hürthle cells)
─ Arranged in sheets, clusters, microfollicles, or dispersed
─ (Isolated cells, sheets, or crowded groups)
─ Moderate to high cellularity
Cytoplasm
─ Abundant, finely granular, eosinophilic
─ (Pink on H&E, green on Pap, blue or gray-pink on Wright/Giemsa)
Nuclei
─ Large size, round shape, often eccentric placement
─ Binucleation common
─ Atypia may be present:
─ Small cell atypia: high N:C
─ Large cell atypia: 2x anisonucleosis
Nucleoli
─ Prominent, central
Background
─ Scant or absent colloid
─ Lymphoid infiltrate usually sparse (unlike Hashimoto's)
─ Transgressing vessels sometimes seen
─ Intracytoplasmic "colloid" inclusions (lumens) sometimes seen
Absent
─ Definitive PTC nuclear features (distinguishes from oncocytic PTC)
─ High-grade features (necrosis, increased mitoses)
─ Abundant lymphs & plasma cells (excluding blood)
Ancillary studies
─ Molecular: Mitochondrial DNA mutations, chromosomal aneuploidies common; RAS mutations less frequent; PPARG rearrangements and BRAF V600E absent
DDx
─ Hashimoto thyroiditis with extensive oncocytic metaplasia (SFHCN has less lymphoid background, more monotonous oncocytic population)
─ Follicular nodular disease with oncocytic change (SFHCN is more cellular, predominantly oncocytic, lacks significant colloid)
─ Oncocytic variant of papillary thyroid carcinoma (SFHCN lacks definitive PTC nuclear features)
─ Medullary carcinoma (some variants can be oncocytic; calcitonin+, neuroendocrine markers+)
Note
─ Category excludes oncocytes with PTC nuclear features
─ "Small cell dysplasia" (small oncocytes with high N:C) or "large cell dysplasia" (marked anisonucleosis) can be seen and may be associated with higher risk
─ Transgressing vessels may be seen in cell block
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Suspicious for Malignancy (Bethesda for Thyroid)
Cytologic features are suspicious for, but not diagnostic of, malignancy; this category is subclassified based on the suspected type of malignancy
Clinical ─ ROM ~45-85% (highly variable depending on subcategory and institutional rates); management typically involves surgical intervention, often total thyroidectomy for suspicious for PTC or MTC
Cytology
General pattern
─ Features present are highly suggestive of a specific malignancy
─ But are quantitatively or qualitatively insufficient for a definitive diagnosis
─ (e.g., focal changes, limited cellularity, obscuring factors like cyst debris)
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Suspicious for Papillary Thyroid Carcinoma
Features are suggestive of PTC, but fall short of a definitive diagnosis; often due to limited extent of nuclear features, sparse cellularity, or cystic degeneration obscuring features
Cytology
Cells
─ Follicular, may be in sheets, clusters
─ Or show microarchitectural abnormalities
Cytoplasm
─ Variable, may be dense
─ Or "histiocytoid" in cystic cases
─ (Abundant vacuolated cytoplasm in histiocytoid cells)
Nuclei
─ Show some features of PTC:
─ Enlargement, pallor, grooves
─ Irregular contours, pseudoinclusions
─ But these are either focal, not fully developed, or seen in limited cells
Background
─ May be clean, cystic (with macrophages, hemosiderin-laden macrophages)
─ Or show scant colloid
Absent
─ Widespread classic PTC features
─ Sufficient atypical cells to definitively diagnose PTC
─ Psammoma bodies, INPIs (or rare), true papillary architecture usually absent
Patterns:
─ Patchy nuclear changes pattern: Nuclear features of PTC present but only in some cell groups or focally; at least moderately cellular
─ Incomplete nuclear changes pattern: Nuclear features generalized but mild (e.g., some enlargement and pallor but few grooves or irregular contours); variable cellularity; nuclear membrane irregularity or molding absent
─ Sparsely cellular pattern: Classic PTC nuclear features present but on very few cells
─ Cystic degeneration pattern: Atypical cells with PTC-like nuclear features in cyst fluid; often "histiocytoid" appearance; features may be obscured
DDx
─ AUS with nuclear atypia (Suspicious has more convincing/extensive, albeit still limited, PTC features)
─ Papillary thyroid carcinoma (Suspicious lacks sufficient quantity/quality of features for definitive diagnosis)
─ Benign changes with reactive atypia (e.g., cyst lining cells, Hashimoto's; Suspicious has more specific PTC-like changes)
Note
─ Molecular testing can be particularly useful in this subcategory
Suspicious for Medullary Thyroid Carcinoma
Features are suggestive of MTC, but may be limited by cellularity, preservation, or lack of definitive amyloid/immunostains
Cytology
Cells
─ Often dispersed, plasmacytoid, spindled, or polygonal
─ Monomorphic noncohesive population
─ May form loose clusters
─ Sparsely or moderately cellular
Cytoplasm
─ Granular (granules not discernible)
─ Eosinophilic to amphophilic
─ Eccentric nuclei common
Nuclei
─ "Salt-and-pepper" chromatin (may be smudged due to suboptimal preservation)
─ Eccentrically placed, round to oval or irregular shapes
─ Binucleation or multinucleation may be seen
─ Nucleoli usually inconspicuous
Background
─ May show amorphous material (fragments suspicious for amyloid but not definitive vs colloid)
─ Blood
Absent
─ Definitive amyloid (e.g., by Congo red)
─ Or confirmatory IHC (calcitonin) due to scant material or technical limitations
DDx
─ AUS (Suspicious for MTC has more specific features like plasmacytoid cells and granular chromatin)
─ Medullary thyroid carcinoma (Suspicious lacks definitive confirmation of amyloid or calcitonin positivity)
─ Hürthle cell neoplasm (can have granular cytoplasm and prominent nucleoli, but different nuclear chromatin; MTC is calcitonin +)
─ Lymphoma/Plasmacytoma (MTC cells are epithelial, not lymphoid/plasma cells; IHC helps)
Note
─ Calcitonin measurement in needle washout fluid can be helpful if material is available (or if inadequate material for IHC)
Suspicious for Lymphoma
Atypical lymphoid population is present (numerous atypical lymphoid cells OR sparsely cellular containing atypical lymphoid cells), but features are not definitive for lymphoma (e.g., due to cellularity, admixed reactive elements, or need for ancillary studies)
Cytology
Cells
─ Predominantly lymphoid
─ May show monomorphism or atypia
─ (Irregular nuclear contours, coarse chromatin, prominent nucleoli)
Cytoplasm
─ Scant
Nuclei
─ Show features concerning for lymphoma but not diagnostic
Background
─ May show lymphoglandular bodies
─ Follicular cells are typically scant or absent
Absent
─ Definitive features of Hashimoto's thyroiditis (polymorphous lymphoid population, Hürthle cells)
─ Definitive IHC/flow cytometry for lymphoma
DDx
─ Hashimoto thyroiditis (Suspicious for Lymphoma has a more monomorphic or atypical lymphoid population)
─ Lymphoma (Suspicious lacks definitive diagnostic features or confirmation by ancillary studies)
─ AUS (if lymphoid atypia is very focal or mild)
Note
─ Flow cytometry and/or cell block for IHC are crucial if lymphoma is suspected
Suspicious for Malignancy, Not Otherwise Specified (NOS)
Features are suspicious for malignancy but do not fit well into the specific subcategories above, or suggest a rare malignancy where definitive features are lacking
Cytology
Cells
─ Show significant atypia concerning for malignancy
Cytoplasm
─ Features do not clearly point to PTC, MTC, or lymphoma
Nuclei
─ Features do not clearly point to PTC, MTC, or lymphoma
Background
─ May be necrotic or inflammatory
Absent
─ Clear differentiation towards a specific common thyroid malignancy
Note
─ This subcategory is used infrequently
─ May include cases suspicious for metastatic malignancy or rare primary thyroid cancers
Malignant (Bethesda for Thyroid)
Cytologic features are diagnostic of malignancy; specific type of malignancy is usually identifiable
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Papillary Thyroid Carcinoma (PTC)
Most common thyroid malignancy, characterized by a constellation of distinctive nuclear features
Clinical ─ Any age, peak 30-50 yrs, F>M; prognosis generally excellent, variable with subtype and stage; lymph node metastases common
Cytology
Cells
─ Follicular epithelial cells
─ Arranged in papillary structures (true fibrovascular cores)
─ Or monolayered sheets, 3D groups, microfollicles
─ Or syncytial-type clusters (cellular swirls, "onion-skin" or "cartwheel")
─ Variable cellularity
Cytoplasm
─ Usually moderate amount
─ Can be dense eosinophilic, squamoid, or clear
─ "Histiocytoid" in cystic PTC
─ Oncocytic or squamous metaplasia can occur
─ Hobnail features (e.g. around psammoma bodies)
Nuclei
─ Show characteristic features (one or more, ideally multiple):
─ Enlargement and overlapping, often molded
─ Irregular contours (longitudinal nuclear grooves, notches, cerebriform shapes)
─ Thick nuclear membranes
─ Chromatin clearing/pallor ("Orphan Annie eye" appearance, powdery)
─ Intranuclear cytoplasmic pseudoinclusions (INPIs)
─ Micronucleoli, often marginal (or macro, central or marginal)
Background
─ May show psammoma bodies (laminated calcifications)
─ "Ropy" or "bubble gum" colloid (thick, viscous)
─ Multinucleated giant cells
─ Hemosiderin-laden macrophages (in cystic variants)
─ Variable lymphocytes (esp with underlying thyroiditis)
─ Necrotic debris is extremely rare
Absent
─ Features of anaplastic carcinoma or medullary carcinoma (unless mixed tumor)
Ancillary studies
─ IHC (+): Thyroglobulin, TTF-1, PAX8 (generally useful for confirming thyroid origin if unusual presentation)
─ Molecular: BRAF V600E mutation common; RAS mutations; RET/PTC rearrangements
DDx
─ Benign follicular nodule with reactive atypia or papillary hyperplasia (PTC has more convincing and widespread nuclear features)
─ AUS/Suspicious for PTC (PTC shows definitive and sufficient features)
─ NIFTP (Non-invasive Follicular Thyroid Neoplasm with Papillary-like Nuclear Features) (cytologically indistinguishable from infiltrative FVPTC; NIFTP lacks invasion on histology, has specific molecular profile)
─ Hyalinizing trabecular tumor (can have grooves/INPIs; distinct architecture, MIB1 membranous staining)
Note
─ Many variants exist (follicular, tall cell, columnar cell, cribriform-morular, diffuse sclerosing, Warthin-like, oncocytic, hobnail, solid) with varying cytologic features and prognoses
─ NIFTP is a non-malignant (or very low risk) entity on histology, but its FNA may be called AUS, SFN, Suspicious for PTC, or even PTC based on extent of nuclear features
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NIFTP (Non-Invasive Follicular Thyroid Neoplasm with Papillary-like Nuclear Features)
A non-invasive encapsulated or well-demarcated follicular-patterned neoplasm with PTC-like nuclear features (≥ some degree of atypia present, unlike benign nodule); reclassified from non-invasive encapsulated FVPTC to reflect its indolent behavior
Clinical ─ Indolent behavior, extremely low risk of adverse outcome if strict diagnostic criteria are met on histology
Cytology
Cells
─ Follicular cells
─ Predominantly in a microfollicular, trabecular, or solid pattern
─ May show some macrofollicles
Cytoplasm
─ Moderate, eosinophilic
Nuclei
─ Show features of PTC (score 2-3 on nuclear scoring system):
─ Enlargement, irregular shape/contours
─ Grooves, chromatin clearing
─ INPIs are rare or absent
Background
─ Scant or absent colloid
Absent
─ Psammoma bodies and true papillae (unlike PTC)
─ Invasion (histologic feature)
─ High-grade features
Ancillary studies
─ Molecular: Predominantly RAS mutations or RAS-like alterations (e.g., PPARG, THADA fusions); BRAF V600E and TERT promoter mutations are typically absent
DDx
─ Follicular adenoma (NIFTP has PTC-like nuclear features)
─ Infiltrative Follicular Variant PTC (cytologically indistinguishable; FVPTC shows invasion on histology)
─ Benign follicular nodule with atypia (NIFTP has more consistent and developed PTC nuclear features)
Note
─ Cytologic diagnosis of NIFTP is not possible
─ FNA may be classified as AUS, SFN, Suspicious for PTC, or Malignant (PTC) depending on the extent and quality of nuclear features
─ The goal of identifying potential NIFTP on FNA is to guide conservative management if appropriate, but definitive diagnosis is histologic
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Papillary Thyroid Carcinoma – Encapsulated Follicular Variant (EFVPTC) and NIFTP (for historical context/comparison)
Cytology (for EFVPTC that would now be NIFTP or invasive EFVPTC)
Cells
─ Follicular, low to moderate cellularity
─ Follicular architectural pattern
Nuclei
─ PTC features subtle, partial, and focally displayed:
─ Enlargement, elongation
─ Chromatin clearing, thick nuclear membranes
Absent
─ INPIs and nuclear grooves (may be rare)
─ True papillae, psammoma bodies
─ Sheet-predominant pattern
Molecular (for NIFTP/encapsulated forms)
─ RAS, or RAS-like (PPARG & THADA) (like follicular neoplasms)
─ RET & RET-like (BRAF V600E) absent (unlike classic PTC)
Papillary Thyroid Carcinoma – Follicular Variant (FVPTC) with Infiltrative Growth
PTC variant characterized by an almost exclusively follicular growth pattern with typical PTC nuclear features and infiltrative growth
Clinical ─ Behavior similar to classical PTC if infiltrative; frequent LN mets, risk recurrence
Cytology
Cells
─ Follicular cells
─ Predominantly in microfollicles, trabeculae, or solid sheets
Cytoplasm
─ Moderate, eosinophilic
Nuclei
─ Show characteristic PTC features:
─ Enlargement, irregular contours, grooves
─ Chromatin clearing, +/- INPIs
Background
─ Scant or absent colloid
─ Psammoma bodies are rare
Absent
─ True papillae (rare or absent)
─ Significant component of classic papillary architecture
Ancillary studies
─ Molecular: BRAF V600E (“BRAF-like PTCs”) more common in infiltrative FVPTC
DDx
─ Follicular neoplasm (FVPTC has PTC nuclear features)
─ NIFTP (cytologically indistinguishable; NIFTP is non-invasive on histology)
─ Benign follicular nodule with reactive atypia (FVPTC has more diffuse and convincing PTC nuclear features)
Note
─ Infiltrative FVPTC is considered malignant
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Papillary Thyroid Carcinoma – Macrofollicular Variant
Very rare PTC variant
Cytology
Cells
─ Follicular, in monolayered sheets or variably sized follicles
Nuclei
─ Subtle and patchy PTC nuclear features
Absent
─ Psammoma bodies and papillary structures
Papillary Thyroid Carcinoma – Cystic Variant
PTC variant presenting as a cyst or with prominent cystic change
Clinical ─ May be misdiagnosed as benign cyst if atypical cells are sparse
Cytology
Cells
─ Follicular, typically in small groups with irregular borders
─ Often "histiocytoid" (hypervacuolated cytoplasm)
Nuclei
─ Definite PTC-like features
─ Chromatin may be less fine (more smudged or degenerated)
Background
─ Cyst fluid with hemosiderin-laden macrophages
Absent
─ Extensive solid component (in pure cystic form)
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Papillary Thyroid Carcinoma – Oncocytic Variant
PTC variant composed predominantly (>75%) of oncocytic cells with characteristic PTC nuclear features
Clinical ─ Similar behavior to classic PTC of similar stage; may be associated with Hashimoto's thyroiditis
Cytology
Cells
─ Predominantly oncocytic (>75%)
─ Arranged in papillae, sheets, or clusters
Cytoplasm
─ Abundant, granular, eosinophilic
Nuclei
─ Definitive PTC features superimposed on oncocytic cells:
─ Enlargement, irregular contours, grooves
─ Chromatin clearing, +/- INPIs
Background
─ May show lymphocytes if Hashimoto's is present (or few lymphocytes)
─ Psammoma bodies can occur
Absent
─ Features of Hürthle cell neoplasm (which lacks PTC nuclei)
Ancillary studies
─ Molecular: BRAF V600E and RAS mutations can occur
DDx
─ Hürthle cell neoplasm (lacks PTC nuclear features)
─ Hashimoto's thyroiditis with extensive oncocytic metaplasia and atypia (PTC nuclear features are definitive in Oncocytic PTC)
─ Follicular nodular disease with oncocytic change (lacks PTC nuclear features)
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Papillary Thyroid Carcinoma – Warthin-Like Variant
PTC variant resembling Warthin tumor of salivary gland, with papillary architecture and oncocytic cells in a prominent lymphoid stroma
Clinical ─ Often associated with Hashimoto's thyroiditis; good prognosis
Cytology
Cells
─ Oncocytic cells
─ Lining papillary fronds with fibrovascular cores
─ Cores are permeated by lymphocytes
Nuclei
─ Convincingly PTC nuclear features
Background
─ Prominent lymphoplasmacytic infiltrate
Absent
─ Features of simple Hashimoto's with reactive atypia (PTC nuclei are key)
Papillary Thyroid Carcinoma – Tall Cell Variant
Aggressive variant of PTC defined by >30% tall cells (height at least 2-3 times width)
Clinical ─ Often older patients, M>F; associated with more aggressive behavior, extrathyroidal extension, metastases, and poorer prognosis
Cytology
Cells
─ Follicular, often in papillary structures or clusters
─ >30% of cells are tall (height 2-3x width)
Cytoplasm
─ Abundant, eosinophilic, granular
Nuclei
─ Classic PTC features, often more prominent
─ Larger and longer; chromatin more granular
─ Nucleoli can be prominent and central
Background
─ May show features of classic PTC; necrosis can be seen
─ Fewer psammoma bodies; more INPIs (often multiple within a nucleus)
Absent
─ Features of other aggressive variants like hobnail (unless mixed)
Ancillary studies
─ Molecular: BRAF V600E in vast majority; TERT promoter mutations also common, portending worse prognosis
DDx
─ Classic PTC (Tall Cell Variant has predominant tall cell morphology)
─ Oncocytic PTC (oncocytes are polygonal with abundant granular cytoplasm, central nuclei; tall cells are columnar)
─ Columnar Cell Variant PTC (columnar cells with pseudostratification and sub/supranuclear vacuoles; different nuclear features)
Note
─ Even 10% tall cells may indicate more aggressive behavior
Papillary Thyroid Carcinoma – Columnar Cell Variant
Rare aggressive PTC variant with cells resembling secretory endometrium or colonic adenoma
Clinical ─ Aggressive in older patients
Cytology
Cells
─ Arranged in papillae, flat sheets, or clusters
─ Pseudostratified columnar shape
Cytoplasm
─ Shows supranuclear & subnuclear vacuoles
Nuclei
─ PTC changes present, but are less prominent
─ Generally few INPI or nuclear grooves
─ Chromatin more hyperchromatic
Background
─ Generally lacks colloid or cystic changes
Ancillary studies
─ IHC (+): PAX8, most also CDX2 (key for DDx with metastatic colorectal)
─ Molecular: BRAF V600E, TERT promoter mutations
DDx
─ Tall Cell Variant PTC (different cell shape and cytoplasmic features)
─ Metastatic adenocarcinoma (colonic) (CDX2+, but thyroglobulin/PAX8-)
Papillary Thyroid Carcinoma – Solid / Trabecular Variant
Rare PTC variant with >50% solid, trabecular, nested, or insular growth and <50% follicles, papillae, colloid
Clinical ─ May have more aggressive behavior than classic PTC
Cytology
Cells
─ Follicular, in syncytial 3D fragments
─ Or microfollicles, trabeculae
Nuclei
─ Show PTC features
Absent
─ True papillae with fibrovascular cores
Ancillary studies
─ Molecular: RET, NTRK, TERT promoter mutations
Papillary Thyroid Carcinoma – Diffuse Sclerosing Variant
Rare PTC variant characterized by diffuse involvement of one or both thyroid lobes, prominent fibrosis, squamous metaplasia, and numerous psammoma bodies
Clinical ─ More common in children and young adults, esp with history of nuclear fallout; extensive LVI, frequent LN mets; prognosis vs. conventional: similar disease-free survival but similar mortality
Cytology
Cells
─ Follicular, in 3D ball-like clusters
─ Intermingling with inflammatory cells
─ Moderate-high cellularity
Cytoplasm
─ Dense with distinct cell borders
─ Unilocular cytoplasmic vacuoles common
─ Squamous metaplastic changes common
Nuclei
─ Show PTC changes; chromatin less pale
─ Fewer INPIs and nuclear grooves
Background
─ Numerous lymphocytes and psammoma bodies
─ Colloid scant or absent
Ancillary studies
─ Molecular: NCOA4::RET fusion common in setting of radiation/fallout
Papillary Thyroid Carcinoma – Hobnail Variant
Rare aggressive PTC variant characterized by cells with apical nuclei creating a "hobnail" or "comet-like" appearance
Clinical ─ Aggressive PTC subtype
Cytology
Cells
─ Show loss of polarity & cohesiveness
─ Micropapillary or papillary clusters
Cytoplasm
─ Tapered, comet- or teat drop-like
Nuclei
─ Eccentric (apically placed)
─ Typical PTC features present
─ Soap bubble-like INPIs
Ancillary studies
─ Molecular: BRAF V600E in vast majority
Medullary Thyroid Carcinoma (MTC)
Neuroendocrine malignancy derived from parafollicular C-cells; accounts for 3-5% of thyroid cancers
Clinical ─ Can be sporadic (75-80%) or hereditary (20-25%, associated with MEN2A, MEN2B, or familial MTC syndromes due to germline RET mutations); may present with neck mass, dysphagia, or symptoms of hormone production (calcitonin, CEA, rarely others); prognosis variable
Cytology
Cells
─ Variable: plasmacytoid, spindled, polygonal, or small/round
─ Often dispersed (non-cohesive)
─ Also in loose clusters, syncytia, or trabeculae
─ Moderate to high cellularity
Cytoplasm
─ Moderate to abundant, granular
─ (Fine eosinophilic or amphophilic granules)
─ Sometimes clear or oncocytic
─ May have vacuoles, melanin, and lumina
─ Eccentric nuclei common in plasmacytoid cells
Nuclei
─ Round, oval, or irregular shapes, eccentric
─ "Salt-and-pepper" (stippled, coarsely granular, neuroendocrine) chromatin characteristic
─ Binucleation/multinucleation common
─ Nucleoli mostly inconspicuous but can be prominent
─ INPIs uncommon
Background
─ Often shows amyloid deposits:
─ Amorphous, waxy, pink-purple on Diff-Quik
─ Orange-red with Congo red (apple-green birefringence)
─ Resembling thick colloid
─ Blood; scant or absent colloid
Absent
─ Definitive PTC nuclear features (no nuclear grooves)
─ Follicular differentiation (unless mixed tumor)
Ancillary studies
─ IHC (+): Calcitonin (highly specific and sensitive), CEA, Chromogranin A, Synaptophysin (these are key for diagnosis)
─ IHC (+, often): TTF-1
─ IHC (-): PAX8, Thyroglobulin
─ Molecular: Somatic RET mutations common in sporadic MTC; germline RET testing for hereditary cases (critical for patient/family management)
DDx
─ Hürthle cell neoplasm (granular cytoplasm, but different chromatin, prominent nucleoli, Calcitonin (-))
─ Lymphoma/Plasmacytoma (dispersed cells, but lymphoid/plasma cell features, specific markers (+), Calcitonin (-))
─ Anaplastic carcinoma, spindle cell type (more pleomorphism, mitoses, necrosis; Calcitonin (-))
─ Parathyroid lesions (can have salt & pepper chromatin; PTH (+), Calcitonin (-))
─ Hyalinizing trabecular tumor (trabecular pattern, but different nuclear features, amyloid (-), Calcitonin (-))
Note
─ Amyloid may not always be obvious on FNA smears; cell block for Congo red stain is helpful
─ Needle washout for calcitonin measurement is highly sensitive
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High-Grade Follicular Cell-Derived Non-Anaplastic Thyroid Carcinoma
This category includes poorly differentiated thyroid carcinoma (PDTC) and differentiated high-grade thyroid carcinoma (DHGTC), which are aggressive follicular cell-derived tumors that are not anaplastic. PDTC is defined by solid/trabecular/insular growth (cellular nests with fibrovascular border), necrosis, and/or increased mitoses (≥3 mits in 10 HPF), lacking well-formed papillae or follicles of PTC/FTC and not meeting criteria for anaplastic carcinoma. DHGTC encompasses PTC or FTC with high-grade features (necrosis or high mitoses).
Clinical ─ Aggressive behavior, intermediate prognosis between well-differentiated and anaplastic carcinomas; older patients; often presents with large mass, local invasion, or metastases
Cytology
Cells
─ Follicular epithelial, uniform malignant population
─ Often in solid sheets, insular clusters, or trabeculae
─ Can show discohesion; high cellularity
─ Microfollicles often present
Cytoplasm
─ Scant to moderate, eosinophilic or amphophilic
─ Sometimes plasmacytoid
Nuclei
─ Significant atypia: variable atypia, high N:C
─ Pleomorphism, hyperchromasia, irregular contours
─ Coarse chromatin; nucleoli may be prominent
─ Increased mitotic activity (often atypical)
─ Convoluted nuclei may be a feature of PDTC
Background
─ Often shows necrosis (tumor cell necrosis), apoptosis
─ Scant or absent (minimal) colloid
─ Inflammation may be present
Absent
─ Definitive features of classic PTC (though PTC nuclei not prominent throughout)
─ (Some PTC-like nuclear features may be focally present, or it may arise from PTC)
─ Extreme pleomorphism of anaplastic carcinoma (frank anaplasia)
Ancillary studies
─ IHC (+): Thyroglobulin (may be focal/weak), TTF-1, PAX8 (confirms thyroid origin)
─ Molecular: Can harbor BRAF, RAS, TERT promoter mutations, TP53 mutations (more common in higher-grade tumors)
DDx
─ Anaplastic thyroid carcinoma (PDTC/DHGTC shows less extreme pleomorphism and often retains some follicular differentiation markers)
─ Medullary thyroid carcinoma (PDTC/DHGTC is Calcitonin (-))
─ Metastatic carcinoma (clinical history and IHC panel crucial)
─ Follicular neoplasm with atypia (PDTC/DHGTC has more overt malignant features like necrosis, high mitoses, significant atypia)
Note
─ Cytologic diagnosis can be challenging; features like insular growth, necrosis, and high mitotic rate are key clues
─ DHGTC is a newer concept where high-grade features are found in a tumor otherwise classifiable as PTC or FTC
Anaplastic Thyroid Carcinoma (ATC)
Highly aggressive, undifferentiated malignancy of thyroid follicular epithelium; one of the most lethal human cancers
Clinical ─ Rapidly enlarging neck mass, often in elderly patients (>50 yo, female); symptoms from neck compression/invasion (dyspnea, dysphagia, hoarseness); lymphadenopathy and distant metastases common at presentation (mc lungs); history of long-standing goiter and euthyroid; dismal prognosis
Cytology
Cells
─ Highly pleomorphic:
─ Spindled (sarcomatoid)
─ Giant cells (osteoclast-like or bizarre multinucleated)
─ Epithelioid, small, or mixed
─ Often discohesive or in loose, irregular clusters
─ (Isolated &/or variably sized groups)
─ Variable cellularity (at least moderate)
─ Can be paucicellular if extensive necrosis/inflammation
Cytoplasm
─ Variable: scant to abundant
─ Eosinophilic, amphophilic, or clear
─ May be infiltrated by neutrophils
─ Phagocytosis of inflammatory cells or other tumor cells may be seen
Nuclei
─ Extreme pleomorphism, enlarged, irregular
─ Marked hyperchromasia
─ Irregular chromatin clumping with parachromatin clearing
─ Bizarre shapes, multiple irregular nucleoli
─ Frequent and atypical mitotic figures
Background
─ Typically necrotic, inflammatory
─ ("Abscess-like" with neutrophil predominant inflammation)
─ Hemorrhagic; tumor diathesis prominent
Absent
─ Differentiated features of PTC, MTC, or lymphoma
─ (Though ATC can arise from pre-existing differentiated thyroid cancer)
Ancillary studies
─ IHC (+): PAX8 (in ~50-80%, can be focal), Pan-Keratin (often, but can be lost)
─ IHC (-): Thyroglobulin (usually negative or very focal), TTF-1 (usually negative)
─ Molecular: Complex karyotypes; TP53 mutations very common; CTNNB1, RAS, BRAF V600E, TERT promoter mutations also frequent
DDx
─ Poorly differentiated/High-grade non-anaplastic carcinoma (ATC has more extreme pleomorphism, often loss of thyroid-specific markers)
─ Medullary carcinoma with anaplastic transformation (Calcitonin may be focally positive in MTC component)
─ Sarcoma (primary or metastatic) (IHC panel crucial; PAX8/keratin favors ATC)
─ Metastatic undifferentiated carcinoma or melanoma (clinical history, IHC panel)
─ Riedel thyroiditis (paucicellular, bland spindle cells, dense fibrosis, no overt malignant features)
Note
─ A small focus of ATC in a background of differentiated thyroid cancer is sufficient for diagnosis
─ Squamoid, rhabdoid, or osteoclastic features can be present
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Lymphoma (Primary Thyroid Lymphoma)
Malignant proliferation of lymphoid cells primarily involving the thyroid gland; most are non-Hodgkin lymphomas, typically B-cell type (esp MALT lymphoma and DLBCL)
Clinical ─ Often arises in background of Hashimoto thyroiditis; typically older women; rapidly enlarging neck mass, compressive symptoms; prognosis variable depending on type and stage
Cytology
Cells
─ Predominantly lymphoid
─ Often monotonous population of atypical lymphocytes
─ Discohesive; marked cellularity, non-cohesive
Cytoplasm
─ Scant, basophilic
Nuclei
─ Features dependent on lymphoma type:
─ MALT lymphoma: Small to medium-sized lymphocytes (2x mature lymphocyte)
─ Irregular nuclear contours, condensed/vesicular chromatin
─ Inconspicuous/small nucleoli (centrocyte-like cells)
─ Lymphoepithelial lesions (lymphocytes infiltrating follicular epithelium) may be seen
─ DLBCL: Large lymphocytes
─ Vesicular/coarse chromatin, prominent nucleoli
─ Irregular nuclear membranes; mitoses common
─ Abundant basophilic cytoplasm (for DLBCL)
Background
─ Lymphoglandular bodies (cytoplasmic fragments)
─ Follicular cells are scant or absent (or oncocytes)
─ Or show features of Hashimoto's
─ Necrosis may be present in high-grade lymphomas
─ Plasma cells absent
Absent
─ Features of Hashimoto's alone (polymorphous infiltrate, Hürthle cells, germinal centers without overt atypia)
Ancillary studies
─ IHC (on cell block) / Flow Cytometry: Crucial for diagnosis and classification; B-cell markers (CD20, CD79a), T-cell markers (CD3, CD5), Kappa/Lambda light chain restriction (for B-cell clonality), Ki-67 proliferation index
─ Molecular: Clonality studies (e.g., IgH gene rearrangement) can confirm B-cell lymphoma
DDx
─ Hashimoto thyroiditis (polymorphous lymphoid infiltrate, Hürthle cells, reactive germinal centers; lymphoma is more monotonous or overtly atypical)
─ Anaplastic carcinoma, small cell type (ATC is keratin+, PAX8+; lymphoma is CD45+)
─ Medullary carcinoma, small cell variant (MTC is Calcitonin+, neuroendocrine markers+)
─ Metastatic small cell carcinoma (clinical history, IHC)
Note
─ FNA is often diagnostic, especially with ancillary studies; however, excisional biopsy may be needed for definitive subtyping in some cases
Bethesda ROM & Management
Brief summary of Risk of Malignancy (ROM) and general management for each Bethesda category (as per 3rd Edition, 2023)
─ I. Non-Diagnostic/Unsatisfactory: ROM not well defined (varies with reason for ND); Repeat FNA with US-guidance
─ II. Benign: ROM <5% (typically 0-3%); Clinical and/or US follow-up
─ III. AUS: ROM ~10-40% (highly variable, can be sub-stratified); Repeat FNA, molecular testing, or diagnostic lobectomy
─ IV. Follicular Neoplasm (SFN/HCN): ROM ~15-45% (FN <25-40%); Diagnostic lobectomy or molecular testing to guide surgery
─ V. Suspicious for Malignancy: ROM ~45-85% (highly variable, <60-75%); (Near) total thyroidectomy or diagnostic lobectomy based on suspicion/moleculars
─ VI. Malignant: ROM ~95-99% (100%); (Near) total thyroidectomy (or lobectomy for low-risk PTC)
Note ─ ROMs are approximate and can vary by institution and specific features within categories; molecular testing increasingly refines risk. Management is individualized.
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Other Tumors
Rare primary or secondary tumors of the thyroid
Cribriform-Morular Thyroid Carcinoma
Rare indolent tumor, often associated with Familial Adenomatous Polyposis (FAP) or Gardner syndrome; can also be sporadic
Clinical ─ Young females predominantly; excellent prognosis
Cytology
Cells
─ Epithelial cells
─ Arranged in cribriform, papillary-like formations, or solid patterns
─ Characteristic morules (squamoid whorls/eddy formation without keratinization)
─ Background spindle cells, background histiocytes
Cytoplasm
─ Moderate, eosinophilic
Nuclei
─ Elongated, pseudostratified appearance in papillary/cribriform areas
─ Hyperchromatic, vesicular chromatin
─ Nuclear grooves and pseudoinclusions common (few other PTC-like features)
─ Morular cells have bland, pale nuclei
Background
─ May show spindle cells
─ Colloid usually scant or absent
─ Psammoma bodies and multinucleate giant cells rare/absent
Absent
─ Typical thick colloid or extensive lymphocytic infiltrate
Ancillary studies
─ IHC (+): Nuclear/cytoplasmic β-catenin (strong and diffuse, key feature), TTF-1, PAX8 (often weak/focal), ER/PR (often)
─ IHC (-): Thyroglobulin (often negative or focal), Calcitonin
─ Molecular: APC gene mutations (in FAP-associated); CTNNB1 (Wnt/β-catenin) mutations (in sporadic)
DDx
─ Papillary thyroid carcinoma (CMTC has morules, β-catenin nuclear staining, often thyroglobulin negative)
─ Hyalinizing trabecular tumor (different architecture, MIB1 membranous staining)
Note
─ Morules are a key diagnostic feature
Hyalinizing Trabecular Tumor (HTT)
Rare follicular cell-derived neoplasm of uncertain malignant potential (vast majority women), though most behave indolently; some consider it a variant of PTC
Clinical ─ Predominantly adult females; usually presents as solitary nodule; excellent prognosis
Cytology
Cells
─ Follicular, round or spindle shaped
─ Arranged in trabeculae, nests, or clusters
─ Radiating from hyaline core
─ Embedded in hyaline stromal material (may be scant on FNA)
Cytoplasm
─ Moderate, eosinophilic or amphophilic
─ Paranuclear yellow bodies (intracytoplasmic hyaline globules) may be seen (rare on FNA)
Nuclei
─ Elongated or oval shape, fine chromatin
─ Numerous nuclear grooves, and intranuclear pseudoinclusions (PTC-like features common)
Background
─ May show hyaline material (pink, amorphous on Diff-Quik)
─ Colloid scant or absent; occasional PBs
Absent
─ True papillae or extensive microfollicular pattern
─ Papillary, sheet-like fragments
Ancillary studies
─ IHC (+): MIB1/Ki-67 shows characteristic membranous staining pattern (very specific)
─ Molecular: GLIS rearrangements (GLIS1 or GLIS3) are characteristic and specific; BRAF/RAS mutations absent
DDx
─ Papillary thyroid carcinoma (HTT has trabecular architecture, hyaline stroma, MIB1 membranous staining, GLIS rearrangement)
─ Medullary thyroid carcinoma (HTT is calcitonin negative, amyloid negative)
─ Follicular neoplasm (HTT has PTC-like nuclear features and characteristic IHC/molecular)
Note
─ Cytologic diagnosis can be challenging due to overlap with PTC; MIB1 staining on cell block can be very helpful
🚽Urinary
Adequacy
Adequacy in urinary cytology is determined by the interplay of four specimen characteristics: collection type, cellularity, volume, and cytomorphological findings. The term "adequacy" refers to the usefulness of the specimen to diagnose or raise suspicion for High-Grade Urothelial Carcinoma (HGUC). The presence of any atypical, suspicious, or malignant findings makes a specimen intrinsically adequate.
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Negative for HGUC (NHGUC) (Paris System)
The "Negative for High-Grade Urothelial Carcinoma" (NHGUC) category includes all entities that pose no significant risk for developing HGUC based on current knowledge. This encompasses normal cellular elements, benign cellular changes, specific reactive conditions, infectious agents, and low-grade urothelial neoplasms (LGUN) that lack the cytologic features concerning for HGUC.
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Atypical Urothelial Cells (AUC) (Paris System)
A category for urothelial cells with cytologic changes that are more pronounced than reactive changes but fall short of being suspicious for high-grade carcinoma. It requires an elevated N:C ratio plus at least one other qualifying feature.
Nuclei
─ N:C ratio ≥ 0.5 due to nuclear enlargement (required major criterion).
─ Must also have at least one of the following minor criteria: nuclear hyperchromasia, coarse/clumped chromatin, or an irregular nuclear membrane.
Note
─ The AUC category is defined by an elevated N:C ratio plus one additional nuclear abnormality; the presence of two or more minor criteria elevates the diagnosis to SHGUC.
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Suspicious for HGUC (SHGUC) (Paris System)
A category reserved for cases with abnormal urothelial cells that are quantitatively or qualitatively insufficient for a definitive diagnosis of HGUC. The cells show more atypia than AUC but do not fully meet HGUC criteria.
Cell Pattern
─ Affects non-superficial, non-degenerated urothelial cells.
Nuclei
─ N:C ratio between 0.5 and 0.7.
─ Moderate to severe hyperchromasia (required).
─ Must have at least one of the following: coarse, clumped chromatin OR an irregular nuclear membrane.
Note
─ SHGUC is used for cases that are highly suggestive but quantitatively fall short of a definitive HGUC diagnosis.
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High-Grade Urothelial Carcinoma (HGUC) (Paris System)
A malignant neoplasm of the urothelium characterized by significant cytologic atypia. The diagnosis requires a sufficient number of cells meeting all specified criteria.
Cell Pattern
─ A minimum of 5 to 10 abnormal cells are required for diagnosis.
─ Cells are often found as individual cells but can form cohesive clusters.
─ Marked variation in cell size and shape (pleomorphism).
Cytoplasm
─ Scant, pale, or dense.
Nuclei
─ High N:C ratio (≥ 0.7).
─ Moderate to severe hyperchromasia.
─ Irregular nuclear membrane.
─ Coarsely clumped chromatin.
─ Chromatin may be "jet black" and smooth or glassy.
Background
─ Necrosis and inflammation are often present.
DDx
─ Reactive Urothelial Cells: May have prominent nucleoli but lack the combination of high N:C ratio, hyperchromasia, and irregular membranes seen in HGUC.
Note
─ The definitive diagnosis of HGUC rests on the constellation of a high N:C ratio, hyperchromasia, coarse chromatin, and an irregular nuclear membrane in a sufficient number of cells.
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Superficial (Umbrella) Cells
Large, terminally differentiated cells forming the innermost layer of the urothelium, characterized by their unique shape and abundant cytoplasm.
Cell Pattern
─ Canopy-shaped large cells.
─ Rounded luminal surface with scalloped borders.
Cytoplasm
─ Abundant and often vacuolated or foamy.
─ Asymmetric, thick cytoplasmic edge may be present.
─ Low N:C ratio.
Nuclei
─ Centrally located.
─ Often single, but can be bi- or multinucleated.
─ Smooth nuclear membranes.
─ Fine chromatin.
─ Nucleolus occasionally prominent.
Note
─ The most superficial cells of the bladder, which can show reactive changes but are distinguished by a low N:C ratio and bland nuclei.
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Intermediate Urothelial Cells
Cells from the middle layers of the urothelium, which are less mature than superficial cells and have a higher N:C ratio.
Cell Pattern
─ Found singly or in small, loose clusters.
Cytoplasm
─ Less cytoplasm than superficial cells.
─ Less vacuolization compared to superficial cells.
Nuclei
─ Similar in size to superficial cell nuclei.
─ Chromatin is slightly coarser than in superficial cells.
─ Higher N:C ratio than superficial cells.
Note
─ Higher N:C ratio compared to superficial cells can be a potential pitfall, but bland nuclear features are reassuring.
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Deep Urothelial (Basal) Cells
The smallest and least mature cells of the urothelium, found in the deepest layers and often seen in instrumented specimens.
Cell Pattern
─ Small-to-intermediate sized fragments.
Cytoplasm
─ Scant, resulting in a high N:C ratio.
Nuclei
─ Round with uniformly pale chromatin.
─ Uniform in size and regularly arranged within fragments.
Absent
─ True fibrovascular cores, distinguishing them from low-grade papillary neoplasms.
Note
─ A high N:C ratio may appear concerning, but nuclei are uniform with bland, pale chromatin.
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Squamous Epithelial Cells
Squamous cells found in urine, which can originate from the bladder trigone, urethra, or be contaminants from the female genital tract.
Clinical
─ More common in women, where they can be contaminants from the vagina or perineum.
─ May arise from the bladder trigone due to estrogenic effect.
─ Can be seen after instrumentation or with chronic irritation (e.g., stones), which can cause squamous metaplasia.
Note
─ Benign squamous cells are a common finding and are not specifically reported under The Paris System unless they are atypical.
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Glandular Cells
Glandular cells in urine can be benign or malignant and may originate from the urinary tract itself or from adjacent organs.
Clinical
─ May originate from uterine cervix or corpus in women.
─ Can be seen in endometriosis or Mullerianosis involving the urinary tract.
─ Can represent metaplastic processes like cystitis cystica/glandularis and intestinal metaplasia.
─ May indicate a urachal remnant.
Cytoplasm
─ Vacuolated.
Nuclei
─ Small.
Note
─ The presence of glandular cells requires clinical correlation to determine their origin and significance.
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Renal Tubular Epithelial Cells
Epithelial cells originating from the renal tubules, which can be shed into the urine, sometimes forming casts.
Cell Pattern
─ Small fragments of cells, often with scalloped edges.
─ May form cellular casts.
Cytoplasm
─ Varies from scant to large and vacuolated.
─ Cells from the proximal convoluted tubule (PCT) are less common and have abundant granular cytoplasm resembling histiocytes.
Background
─ Proteinaceous casts may be present.
Note
─ While typically small, their presence in casts is a key feature indicating a renal origin.
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Degenerative Changes
Morphological alterations in cells due to delayed fixation or intrinsic processes like urinary tract obstruction, affecting their diagnostic interpretation.
Cell Pattern
─ Intermediate Cells: Appear smaller than well-preserved cells.
─ Umbrella Cells: Appear to have reduced cytoplasm.
─ HGUC Cells: Often retain large nuclei despite degeneration.
Cytoplasm
─ Umbrella Cells: Cytoplasm remains granular.
Nuclei
─ Intermediate Cells: Nuclei are shrunken and dark (pyknotic); N:C ratio is usually < 0.5.
─ Umbrella Cells: Retain their distinctive chromatin pattern; N:C ratio appears increased due to cytoplasmic loss.
─ Melamed-Wolinska bodies (intracytoplasmic eosinophilic inclusions) may be seen.
Note
─ Degenerative changes are common, especially after relief of a urinary tract obstruction, and must be distinguished from true atypia.
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Radiation-Related Changes
Cytomorphologic changes in urothelial cells resulting from therapeutic radiation to the pelvis.
Cell Pattern
─ Increased cellularity with loosely cohesive groups and isolated cells.
Cytoplasm
─ Marked cytomegaly.
─ Cytoplasmic vacuolization and polychromasia (staining with both eosin and hematoxylin).
Nuclei
─ Marked nucleomegaly with a preserved N:C ratio.
─ Multinucleation is common.
─ Finely granular chromatin.
Absent
─ Prominent nucleoli.
Note
─ The key feature is cellular and nuclear enlargement (cytomegaly and nucleomegaly) without a corresponding increase in the N:C ratio.
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Immunotherapy-Related Changes
Inflammatory and reactive changes in the urothelium following intravesical Bacillus Calmette-Guérin (BCG) therapy for bladder cancer.
Clinical
─ Specimen should be collected at least six weeks after the final BCG instillation to avoid misinterpretation.
Cell Pattern
─ Granulomas composed of epithelioid histiocytes, lymphocytes, and multinucleated giant cells.
─ Reactive umbrella cells are common.
Background
─ Granular debris.
Note
─ The presence of granulomas is the hallmark of BCG-related changes.
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Bladder Diversion Specimens
Urine specimens from patients who have undergone surgical creation of a urinary reservoir (e.g., ileal conduit) using a segment of bowel.
Clinical
─ Patient has a history of cystectomy with urinary diversion.
Cell Pattern
─ Typically high cellularity.
─ Degenerated enteric glandular cells, appearing singly or in small, histiocyte-like clusters.
─ Urothelial cells from the upper tracts may also be present.
Cytoplasm
─ Granular, sometimes vacuolated.
Nuclei
─ Small, dark, and punctate with minimal pleomorphism.
─ Granular chromatin.
Background
─ "Dirty" background with abundant mucus, bacteria, and granular debris.
─ Vegetable material (e.g., guar bean from ostomy appliance adhesive) may be a contaminant.
Absent
─ Significant nuclear hyperchromasia, coarse chromatin, or prominent nucleoli (unless concomitant HGUC is present).
Note
─ The combination of degenerated glandular cells and a dirty, mucus-filled background is characteristic.
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Benign Urothelial Tissue Fragments (BUTFs)
Cohesive, three-dimensional groups of benign urothelial cells, which can be seen in both voided and instrumented urine.
Cell Pattern
─ Cohesive tissue fragments, often as a monolayer.
─ Lacks significant cellular crowding or disorganization.
Cytoplasm
─ Moderate amount and well-preserved.
─ Low to moderate N:C ratio.
Nuclei
─ Round to oval with smooth nuclear membranes.
─ Uniform nuclear size and shape.
─ Finely granular chromatin with small or inconspicuous nucleoli.
Background
─ Typically clean or contains minimal inflammatory cells or debris.
Absent
─ True fibrovascular cores.
─ Significant nuclear pleomorphism or hyperchromasia.
Note
─ BUTFs are characterized by architectural order and cytologically bland cells.
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Atypical Urothelial Tissue Fragments (AUTFs)
Tissue fragments of urothelial cells that display some architectural or cytologic atypia falling short of a definitive diagnosis of malignancy.
Cell Pattern
─ Increased cellularity with disorganized architecture.
Cytoplasm
─ Less abundant than in benign fragments; may be homogeneous or slightly vacuolated.
Nuclei
─ Irregular nuclear membranes and anisonucleosis (variation in nuclear size).
─ Increased N:C ratio.
─ Coarse chromatin.
Background
─ May contain inflammatory cells, red blood cells, or necrotic debris.
Note
─ The presence of singly dispersed atypical cells is generally more concerning than atypia confined to tissue fragments.
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Low-Grade Urothelial Neoplasia (LGUN)
A category encompassing low-grade papillary urothelial neoplasms. Cytologic diagnosis is challenging and often requires the presence of distinct architectural features.
Clinical
─ Cells are more likely to be exfoliated in instrumented urine specimens than in voided urine.
Cell Pattern
─ Monotonous population of cells, often arranged in papillary fragments.
Cytoplasm
─ Moderate and homogeneous.
─ May be slightly vacuolated.
Nuclei
─ Oval-shaped with mild nuclear contour irregularities.
─ Finely granular chromatin with small nucleoli.
─ N:C ratio approaches 0.5.
Absent
─ Dispersed cells with high-grade features.
Note
─ A definitive cytologic diagnosis of LGUN is restricted to cases with three-dimensional papillary fragments containing fibrovascular cores.
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Urolithiasis / Nephrolithiasis (Stone Atypia)
Reactive and reparative changes in urothelial cells caused by the mechanical irritation of urinary stones (calculi).
Cell Pattern
─ Clusters or sheets of cells with smooth (community) borders.
Cytoplasm
─ Moderate to abundant, resulting in a low N:C ratio.
─ A peripheral cytoplasmic collar may be seen around the nucleus.
Nuclei
─ May show mild to moderate nuclear hyperchromasia.
─ Nucleoli usually small or inconspicuous.
Background
─ Generally clean, but may contain crystalline material.
Note
─ Reactive nuclear changes, including hyperchromasia, can mimic malignancy but occur in cells with a low N:C ratio and regular nuclear contours.
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Acute Bacterial Infections
Inflammatory changes in the urothelium in response to a bacterial infection, which can cause reactive cellular changes.
Cell Pattern
─ Cellular specimens consisting of reactive urothelial cells.
─ Abundant infiltrating neutrophils admixed with urothelial cells.
Nuclei
─ Slightly enlarged with prominent nucleoli.
─ Fine, evenly distributed chromatin and thin nuclear membranes.
Background
─ Clusters of bacteria support the diagnosis.
Note
─ The presence of numerous neutrophils with reactive urothelial cells is the key to diagnosis.
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Polyomavirus (BK Virus)
A common viral infection that can reactivate in immunocompromised individuals, producing "decoy cells" that can mimic high-grade urothelial carcinoma.
Cell Pattern
─ Infected cells are enlarged.
Nuclei
─ Enlarged with smooth, regular nuclear membranes.
─ Contain a single, large, homogeneous, basophilic ("ground-glass") intranuclear inclusion.
─ Chromatin is displaced to the periphery, creating a rim.
─ High N:C ratio due to nuclear enlargement.
Note
─ The key distinguishing feature from HGUC is the smudgy, opaque intranuclear inclusion and the perfectly smooth nuclear membrane.
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Herpes Simplex Virus (HSV)
A viral infection that can cause characteristic multinucleated giant cells in the urothelium.
Cell Pattern
─ Multinucleated giant cells.
Cytoplasm
─ Moderate to scant and may be well-preserved.
─ Intranuclear inclusions may be present.
Nuclei
─ Exhibit the "3 M's": Multinucleation, Molding of nuclei against each other, and Margination of chromatin along the nuclear border.
─ Irregular nuclear contours.
─ N:C ratio may be increased.
Note
─ The classic triad of multinucleation, molding, and margination of chromatin is diagnostic.
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Parasites
Organisms that can inhabit the urinary tract, with Schistosoma haematobium being the most significant due to its association with squamous cell carcinoma.
Clinical
─ Schistosoma haematobium is classically associated with the development of primary squamous cell carcinoma of the bladder.
─ Patients are often from endemic regions.
─ Other parasites, like Enterobius vermicularis (pinworm), may be seen as extra-urinary contaminants.
Note
─ Identification of a parasitic organism is clinically important and should be reported, but common contaminants like crystals or vegetable material must be excluded.
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Primary Squamous Cell Carcinoma
A malignant neoplasm of the urinary tract showing pure squamous differentiation. It is often associated with chronic irritation or Schistosoma infection.
Clinical
─ Associated with chronic conditions like Schistosoma haematobium infection or urinary stasis (e.g., in paraplegia).
Cell Pattern
─ Can present as isolated cells, loose clusters, or tightly cohesive three-dimensional groups.
─ Keratinizing tumors show large, polygonal cells, sometimes as fiber or tadpole cells, and may form squamous pearls.
─ Non-keratinizing tumors have cells with a more metaplastic, rigid, basophilic appearance.
Cytoplasm
─ Keratinized cells have dense, orangophilic cytoplasm and sharp borders. N:C ratio is variable.
─ Non-keratinizing cells have basophilic cytoplasm and a high N:C ratio.
Nuclei
─ Severely atypical, enlarged, and hyperchromatic with marked overlapping.
─ Chromatin is coarse.
─ Pyknosis is frequent in keratinized cells.
─ Nucleoli are often prominent in non-keratinizing cells.
Background
─ Anucleated squamous "ghost" cells.
─ Small atypical parakeratotic cells.
─ Necrosis, red blood cells, and neutrophils.
Note
─ Non-keratinizing SCC can be difficult to distinguish from HGUC with squamous differentiation based on cytology alone.
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Primary Adenocarcinoma
A rare malignant neoplasm of the urinary bladder characterized by pure glandular differentiation. It accounts for 0.5-2% of all bladder malignancies and can be subclassified as enteric, mucinous, or clear cell types.
Clinical
─ Risk factors include intestinal metaplasia, bladder exstrophy, schistosomiasis, and chronic irritation.
─ Prognosis is generally poor and predicted by pathological stage.
Cell Pattern
─ Variable cellularity, often in three-dimensional clusters.
─ Enteric type shows columnar cells in palisading arrangements.
─ Mucinous type shows rounded clusters; signet ring cells may be present.
─ Clear cell type shows clusters of large cells.
Cytoplasm
─ Enteric type may be vacuolated.
─ Mucinous type is delicate with cytoplasmic vacuoles.
─ Clear cell type has abundant, hypervacuolated cytoplasm.
Nuclei
─ Large and elongated, vesicular or hyperchromatic, with irregular shapes.
─ Prominent nucleoli are common.
Background
─ Necrosis and mucin.
DDx
─ HGUC with glandular differentiation: This is more common than pure adenocarcinoma and must be excluded.
─ Secondary Adenocarcinoma: Metastasis from colorectum, prostate, or gynecologic tract is more common than primary bladder adenocarcinoma. Clinical correlation is essential.
Note
─ A diagnosis of primary adenocarcinoma requires excluding a secondary origin and ruling out any component of conventional HGUC.
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Primary Small Cell Carcinoma
A high-grade neuroendocrine carcinoma of the urinary bladder, morphologically identical to its pulmonary counterpart. It is rare, aggressive, and often associated with a component of conventional HGUC.
Clinical
─ Strongly associated with tobacco smoking.
─ Presents at an advanced stage and has an aggressive course.
Cell Pattern
─ Moderate to high cellularity.
─ Cells arranged singly, in loose to tightly cohesive clusters, or in linear patterns.
Cytoplasm
─ Scant, with a high N:C ratio.
Nuclei
─ Small to medium size (2-3 times the size of a lymphocyte).
─ Round to oval, hyperchromatic.
─ Finely granular or smudged ("salt-and-pepper") chromatin.
─ Ill-defined nuclear membranes.
─ Prominent nuclear molding.
Background
─ Often hemorrhagic and necrotic with extensive single-cell necrosis (apoptosis).
Absent
─ Prominent nucleoli.
Ancillary studies
─ IHC: (+) Synaptophysin, Chromogranin, CD56.
DDx
─ HGUC: HGUC cells are typically larger, more pleomorphic, with coarser chromatin and prominent nucleoli.
─ Lymphoma: Lymphoma cells are typically discohesive, lack molding, and are positive for lymphoid markers (e.g., CD45).
Note
─ The key features are small cells with scant cytoplasm, nuclear molding, fine chromatin, and extensive apoptosis.
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Primary Large Cell Neuroendocrine Carcinoma
An extremely rare, high-grade neuroendocrine carcinoma composed of large cells with neuroendocrine features. It is aggressive and often associated with HGUC.
Note
─ Morphologically similar to its pulmonary counterpart, featuring large cells, low N:C ratios, coarse chromatin, and prominent nucleoli.
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Secondary Epithelial Malignancies
Metastatic carcinomas from other primary sites are more common than primary non-urothelial malignancies. They often involve the bladder via direct extension from adjacent organs (colorectum, prostate, cervix) or hematogenous spread (lung, breast, stomach).
Note
─ Clinical history and immunohistochemistry are crucial for distinguishing a secondary malignancy from a primary bladder tumor.
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Malignant Melanoma
A rare malignancy in the urinary tract, most often metastatic from a cutaneous primary. It is composed of malignant melanocytes.
Cell Pattern
─ Individually scattered large atypical cells.
Cytoplasm
─ Abundant.
─ May contain a dark, finely dusty brown-to-black melanin pigment.
Nuclei
─ Round to oval, and may be eccentrically placed.
─ Prominent nucleoli.
─ Occasional intranuclear pseudoinclusions.
Note
─ The presence of melanin pigment is a key feature, but amelanotic melanoma can mimic other high-grade malignancies.
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